Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0890 ATGGATGTCAGCATGAGCTTTTCACATGATATGGATAATGAATATGAGAAACTCATTAGAAGGATGAACCCCCCAATGGTTGTTATTGATAATGAAACCTGCAAGAATGCCACAGTTATAAGGGTGGATAGTGCAAACAAACATGGGATTCTTCTCGAAGTTGTTCAAGTTCTTGCTGATCTCAACCTCATAATAACTAAAGCTTACATATCCTCTGATGGTGGTTGGTTCATGGATGTTTTTAATGTCACCGATGAAGACGGAAACAAGGTTACTGATGAAGGGATTCTAGACTACATAGAAAGATCTCTTGGCCCGAATTCGTGTTTCTCATCATCAATGAGATCTGTTGGTGTCAAATCCACTATAGATTACACAATAATTGAGCTAACCGGAACGGACCGGCCTGGATTACTCTCCGAATTAAGTGCCATTCTAACTGACCTCAAATGCAACATAGTAAATGCCAAGGTGTGGACCCACAACTCGCGGGCTGCGGCTGTCGTCCACATCACTGACGTGGAAACAGGGTCTGCCATTACGGATCCTGAGCGACTCTCTAGAATCAAGGGATTACTATGCAACGTACTTAGAGGTAGCGACAACAAAACCCGTGGAGCTAAGATGGTGGTTTCACATGGAGTCACTCACACGGAACGGAGACTTCATCAGATGATGTTTGCTGATCGGGATTATGAGTGGGCCCACAATAACAATGATGTCACATATGATAAGCAGAGGCCGAGTGTTAATGTGGTTAATTGGAATGATAAGGATTACTCAGTTGTTACGATTCAAAGTAAGGATAGGCCTAAGCTTTTGTTTGATACAGTTTTTACTTTGACGGACATGGGATATGTTGTTTTTCATGCCAATATTGATGCCGTAGGACTTGAAGCTTATCAGGAATACTTTATCCGGCATATTGATGGGTCACCTGTAAAATCCGAATCCGAGAGGCAAAGAGTTATACAATGTCTTGAAGCAGCTATCAGAAGAAGAGTCTCGGAGGGGTTGAAGCTTGAATTATGCACTACGGATAGAGTTGGGCTACTATCTGATGTGACTAGAATCTTCCGAGAGAATAGCCTTACGGTTAGCCGGGCTGAAGTGACGACGAAATCGGGCAAGGCGGTAAACACGTTTTACGTTTGTGATGCGTCTGGATATCAGGTTGATTCTAAGACCATAAATTCAATAAGGGAAGCAATAGGGCAAACTATTCTCAAGGTAAAAGGTATTCCTGAAGATATGATAAAACCCAATTCTCAAGACTCTTCTCCGTCCCGCTTTCTCTTTGGCGGGCTTTTCAAATCCCGGTCTTTTGTGAGCTTTCGTTTGATCGGATTCTATTCTTGA 1359 42.6 MDVSMSFSHDMDNEYEKLIRRMNPPMVVIDNETCKNATVIRVDSANKHGILLEVVQVLADLNLIITKAYISSDGGWFMDVFNVTDEDGNKVTDEGILDYIERSLGPNSCFSSSMRSVGVKSTIDYTIIELTGTDRPGLLSELSAILTDLKCNIVNAKVWTHNSRAAAVVHITDVETGSAITDPERLSRIKGLLCNVLRGSDNKTRGAKMVVSHGVTHTERRLHQMMFADRDYEWAHNNNDVTYDKQRPSVNVVNWNDKDYSVVTIQSKDRPKLLFDTVFTLTDMGYVVFHANIDAVGLEAYQEYFIRHIDGSPVKSESERQRVIQCLEAAIRRRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVSRAEVTTKSGKAVNTFYVCDASGYQVDSKTINSIREAIGQTILKVKGIPEDMIKPNSQDSSPSRFLFGGLFKSRSFVSFRLIGFYS 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6964192 6967143 + Conep19aG0091500.1 Cone19ag0890 459327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0890 452 SUPERFAMILY ACT-like 336 405 IPR045865 -
Cone19ag0890 452 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 14 412 IPR040217 -
Cone19ag0890 452 ProSiteProfiles ACT domain profile. 39 119 IPR002912 -
Cone19ag0890 452 Gene3D - 123 196 - -
Cone19ag0890 452 CDD ACT_ACR_1 37 106 - -
Cone19ag0890 452 Pfam ACT domain 126 178 IPR002912 -
Cone19ag0890 452 Pfam ACT domain 345 399 IPR002912 -
Cone19ag0890 452 Pfam ACT domain 38 90 IPR002912 -
Cone19ag0890 452 ProSiteProfiles ACT domain profile. 340 416 IPR002912 -
Cone19ag0890 452 ProSiteProfiles ACT domain profile. 127 209 IPR002912 -
Cone19ag0890 452 SUPERFAMILY ACT-like 34 101 IPR045865 -
Cone19ag0890 452 CDD ACT_ACR_3 260 334 - -
Cone19ag0890 452 CDD ACT_ACR_2 126 199 - -
Cone19ag0890 452 SUPERFAMILY ACT-like 124 198 IPR045865 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0890 Cone-Chr19:6964192 Cone6ag0721 Cone-Chr6:3636025 4.83E-150 dispersed
Cone13ag0891 Cone-Chr13:7892887 Cone19ag0890 Cone-Chr19:6964192 0.00E+00 wgd
Cone19ag0890 Cone-Chr19:6964192 Cone6ag0514 Cone-Chr6:2553284 2.67E-238 wgd
Cone19ag0890 Cone-Chr19:6964192 Cone9ag0526 Cone-Chr9:2511926 7.71E-168 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0890 - - - 0.0