Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0895 ATGAATATATTCAAGCAACTTGTTTTCAAAAAACGCAAGTTTTCTTGTCTTCCAAACCATGGAGTGATTTTCTTCTTTCTTTCATCCCCAGAAAGAAACGCCTCTCTAGAGGTCCATTCATCCGAGCAAGAAGTAGTCATTGCATTGGGAAGCAACATAGGAGATCGACTGCATAATTTCAATGAAGCCTTACACTTAATGAAGAAGTCCGGAATAAACATTTTTAGACATGGTTGCTTATATGAAACAGCCCCAGCATATGTAACTGACCAGCCTCAGTTTCTCAACTCAGCTGTTAGAGCTGTTACAAAGATTGGTCCACATGAATTATTAAAAGCAATCAAGAAAATAGAGAAGGAGGTCGTACAGATGGGATCAGGTGTGGACCAAGACCAATTGATTTGGATATTCTGTTTTACGGAAAATTCGAGGTATATTCTGATATTCTCACCGTTCCTCATGAAAGAATTTGGGAAAGAATTGGCTCTAGTGGATGTGATAGGTTTAGGTGCTGATAGTGATGTTGTTTCTTGCTGGCATTCTTTCTCCAAACATGGAGGACTTTTCGAATCATGGGAAAAATTAGGTGGGGAGTCTGTTATCGGAAAAGAAGAATTAAAACGGGTTTTGCCCATTGAAAATACCTTATGGGACTGGTCAGAAAAGACGTCTGTAATGGGTATTCTTAACCTCACCCCGGATAGTTTCAGTGATGGTGGCAAATTTCAGCCTGTCCAAGCTGCAGTTTCTCAGGTCCGGTTGATGATTTCAGAGGGCGCGGCGCCGATATTATTGATATTGACGCCCAATCTACAAGGCCAATGA 825 40.85 MNIFKQLVFKKRKFSCLPNHGVIFFFLSSPERNASLEVHSSEQEVVIALGSNIGDRLHNFNEALHLMKKSGINIFRHGCLYETAPAYVTDQPQFLNSAVRAVTKIGPHELLKAIKKIEKEVVQMGSGVDQDQLIWIFCFTENSRYILIFSPFLMKEFGKELALVDVIGLGADSDVVSCWHSFSKHGGLFESWEKLGGESVIGKEELKRVLPIENTLWDWSEKTSVMGILNLTPDSFSDGGKFQPVQAAVSQVRLMISEGAAPILLILTPNLQGQ 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7001557 7002509 - Conep19aG0092000.1 Cone19ag0895 459332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0895 274 Gene3D - 204 264 IPR011005 GO:0044237(InterPro)
Cone19ag0895 274 Pfam 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 46 121 IPR000550 GO:0003848(InterPro)|GO:0009396(InterPro)
Cone19ag0895 274 PANTHER FOLATE SYNTHESIS PROTEINS 35 261 IPR045031 GO:0004156(PANTHER)|GO:0009396(InterPro)|GO:0046654(PANTHER)
Cone19ag0895 274 ProSiteProfiles Pterin-binding domain profile. 223 274 IPR000489 GO:0042558(InterPro)
Cone19ag0895 274 SUPERFAMILY Dihydropteroate synthetase-like 212 263 IPR011005 GO:0044237(InterPro)
Cone19ag0895 274 NCBIfam 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 45 121 IPR000550 GO:0003848(InterPro)|GO:0009396(InterPro)
Cone19ag0895 274 SUPERFAMILY 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK 45 121 IPR035907 -
Cone19ag0895 274 CDD HPPK 45 120 IPR000550 GO:0003848(InterPro)|GO:0009396(InterPro)
Cone19ag0895 274 ProSitePatterns Dihydropteroate synthase signature 1. 225 240 IPR000489 GO:0042558(InterPro)
Cone19ag0895 274 Pfam Pterin binding enzyme 226 261 IPR000489 GO:0042558(InterPro)
Cone19ag0895 274 Gene3D - 42 127 IPR035907 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0895 Cone-Chr19:7001557 Cone13ag0898 Cone-Chr13:7943604 7.21E-140 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0895 K13941 - mdm:103446277 288.5