Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0899 ATGGATCGCAGCACCACCCCTCGCCGGAACCGGAAACCGCAAATTAAAGCGGATATATACTCCACCGTCATCGTTCACTCCGGCTCCGATACGGACTCCGATCATAATCCGAATGACCAGAAGAAGCCTCAACCGCGGCGCAAACAAGAGGTGGACCTCTACGCCACAATGGTCTACAAGGACGATGCTCTAGACGGCGATGTAGAATCCGAAGACGACGACTCCTATCTCCCTCCCTTACTCAAACGCCTCCCCAAGGATTTCGGTGGTGGAGCTCCAATTGACCACGACGACGACGATTTCGATTCAGATAACGACGTTGGTGATTTTGGCACCATGATCGTCAAGTCTGACAGGAATCGACCTAAGAATCGGTATTCATCTTCCTCCGGTACGGTAAAGTCTCGGAGTTCGCCATTCTCGGATTCTAGGAAGAGAGTGGGCGGCATTGGTGGTAGTGGTGAAGATGACAATGAGGACGAAGTAGGTGATAATGATCCATTTTCAACGTTCCTGGTGAGGTCCACATTGAGGTCGAGCGAGAGAGAATCGGTGAGTGGGACTATCGTGAGGAGGACTAGTGGTGGTGGAGCTGGAGAGCTGGACGGCTCGACGATGAGTAGAGCAGTGGCGAGTATGCAAGCAGTAGGAGAGTTAGGGTTTGGTAAGCAGAGGAAGGGGAATGGGCATTCGCACGGGGAAGAGGGTGGTGGTCAGCGAACTACGAAGATGTCATCGAGCTCGATTCCAGGGGGCGTTGCCTTGGAAGATCCTACTACCAAGTACGAACTGCTAAACGAACTAGGTAAAGGATCTTATGGGGCTGTTTACAAAGCTAGGGATATAAAAACATCAGAGCTTGTTGCTATTAAGGTCATATCGCTAACTGAAGGGGAGGAAGGATATGAAGAAATTCGTGGTGAGATAGAGATGTTGCAGCAATGTAGTCATCCTAATGTTGTCCGCTACCTTGGGAGCTACCAGGGAGAAGATTATCTTTGGATAGTGATGGAGTACTGTGGCGGTGGAAGTGTTGCTGACTTAATGAATGTTACCGAGGAACCTTTAGAAGAGTATCAGATAGCATATATTTGCCGGGAGGCATTGAAGGGACTTGCATATCTACACTCAATATTCAAGGTTCATAGAGATATCAAAGGTGGAAATATCTTATTAACTGAACAGGGAGATGTCAAGTTGGGTGATTTTGGAGTTGCAGCTCAGCTTACAAGAACCATGTCAAAGCGCAACACTTTCATTGGCACTCCACATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGCTATGATGGAAAGGTGGATGTGTGGGCTCTTGGTGTATCTGCTATTGAAATGGCTGAGGGACTTCCTCCAAGATCGGCAGTTCATCCCATGAGGGTTTTGTTCATGATATCCATTGAGCCAGCTCCAATGCTTGAGGATAAGGAAAAATGGTCTTTGCTATTCCATGATTTTATTGCAAAGTGCCTAACAAAAGAACCTCGCGTACGTCCAACTGCAGCCGAATTGCTGAAGCACAAGTTCATTGATAAATGCAAATGTGGAGCCACAGTGATGGTGCCAAAGATTGAAAAGGCTAGGGATATTAGGACCGAAATGGCTCTTCAAGAACAAGCCTTGGGTGCAGCAGGAGATAATACTCTTGTAGCTCCAAAGGTTAATGAGGATTATGGAGATACTGTTCCTTCAAGGCCCCAGAATATTGTTCCTATGGCTGAAGAACTTTCCTCAGAGGCGGTTGACTTTGGCACGGTAATTGTTCATGGTGGAGATGAGATAGATGAGACAATTTCTCTGACCCGAACTGTCAGGGCTGAAGCATCAACTTCTTCTTTACTCCATGAAAGCCTTTCCATCAGTGGGACAGGAGGAAAACAAATTTATTCCGGTGTGGATGTTACAGGAGCTGTTGCAAGTAATGCTCTAGATGAAAAATCACAGACACCAGGCACATCATCACCTTCACTGGTTGGCATGCCTGAGCAAAACTTCAAGACAAAAACTATTTCTCAAGGGCGGGGCGTCGGTCTAAGTATGGGCACTGGCACATTAAAAGGTGAAACAGTTGGTTGGAAAGCCTTTGCCTTGCAAGATAAGCTTTGGTCCATATATGCTGCTGGCAATACGGTACCCATTCCATTCTTGAAGGCAACAGATATATCCCCAATTGCTTTATTATCTGACAATGTCCTTGGAGGCAAGCCAGAGGAAAACAGTGGAACTGCTCCAGTAGAAGCGCTTCAGGAACTTTTTACTGGCGATGCACAATCAAAGAAGGGTCGAAGAGGACAAAATGAGATGCCTCTGCCTCCAAGTGTTTACCGAACTCTCACGTCTAGCTCAACTCTATTGAACCTGGCACAGGCTCTGGCTTACCACAAAATGTGTTATGATGACATGCCTCTTCAGGAGTTGCAGGCTACACAAGAGCAACAGACAATACAGAATCTATCTGATACACTTAGAACTATTCTTCGACTCTAA 2505 46.75 MDRSTTPRRNRKPQIKADIYSTVIVHSGSDTDSDHNPNDQKKPQPRRKQEVDLYATMVYKDDALDGDVESEDDDSYLPPLLKRLPKDFGGGAPIDHDDDDFDSDNDVGDFGTMIVKSDRNRPKNRYSSSSGTVKSRSSPFSDSRKRVGGIGGSGEDDNEDEVGDNDPFSTFLVRSTLRSSERESVSGTIVRRTSGGGAGELDGSTMSRAVASMQAVGELGFGKQRKGNGHSHGEEGGGQRTTKMSSSSIPGGVALEDPTTKYELLNELGKGSYGAVYKARDIKTSELVAIKVISLTEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEDYLWIVMEYCGGGSVADLMNVTEEPLEEYQIAYICREALKGLAYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLLFHDFIAKCLTKEPRVRPTAAELLKHKFIDKCKCGATVMVPKIEKARDIRTEMALQEQALGAAGDNTLVAPKVNEDYGDTVPSRPQNIVPMAEELSSEAVDFGTVIVHGGDEIDETISLTRTVRAEASTSSLLHESLSISGTGGKQIYSGVDVTGAVASNALDEKSQTPGTSSPSLVGMPEQNFKTKTISQGRGVGLSMGTGTLKGETVGWKAFALQDKLWSIYAAGNTVPIPFLKATDISPIALLSDNVLGGKPEENSGTAPVEALQELFTGDAQSKKGRRGQNEMPLPPSVYRTLTSSSTLLNLAQALAYHKMCYDDMPLQELQATQEQQTIQNLSDTLRTILRL 834
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7013667 7020032 - Conep19aG0092400.1 Cone19ag0899 459336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0899 834 MobiDBLite consensus disorder prediction 169 191 - -
Cone19ag0899 834 Pfam Protein kinase domain 262 516 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0899 834 SMART serkin_6 262 516 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0899 834 ProSitePatterns Protein kinases ATP-binding region signature. 268 291 IPR017441 GO:0005524(InterPro)
Cone19ag0899 834 Gene3D Transferase(Phosphotransferase) domain 1 258 547 - -
Cone19ag0899 834 CDD STKc_MAP4K3_like 261 516 - -
Cone19ag0899 834 MobiDBLite consensus disorder prediction 220 255 - -
Cone19ag0899 834 ProSiteProfiles Protein kinase domain profile. 262 516 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0899 834 SUPERFAMILY Protein kinase-like (PK-like) 259 517 IPR011009 -
Cone19ag0899 834 MobiDBLite consensus disorder prediction 32 55 - -
Cone19ag0899 834 MobiDBLite consensus disorder prediction 1 15 - -
Cone19ag0899 834 MobiDBLite consensus disorder prediction 647 667 - -
Cone19ag0899 834 MobiDBLite consensus disorder prediction 238 253 - -
Cone19ag0899 834 MobiDBLite consensus disorder prediction 124 138 - -
Cone19ag0899 834 FunFam Aurora kinase A 256 343 - -
Cone19ag0899 834 MobiDBLite consensus disorder prediction 1 203 - -
Cone19ag0899 834 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 237 569 IPR050285 GO:0006468(PANTHER)|GO:0035556(PANTHER)|GO:0043408(PANTHER)
Cone19ag0899 834 FunFam serine/threonine-protein kinase dst1 isoform X1 259 550 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1056 Cone-Chr14:8907549 Cone19ag0899 Cone-Chr19:7013667 6.13E-74 dispersed
Cone19ag0899 Cone-Chr19:7013667 Cone6ag0161 Cone-Chr6:791788 1.29E-78 dispersed
Cone13ag0901 Cone-Chr13:7955235 Cone19ag0899 Cone-Chr19:7013667 0 wgd
Cone18ag1127 Cone-Chr18:8153407 Cone19ag0899 Cone-Chr19:7013667 2.47E-31 wgd
Cone19ag0899 Cone-Chr19:7013667 Cone2ag0776 Cone-Chr2:33726449 2.97E-28 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82398 PF00010 HLH 2.70E-10 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0899 - - - 0.0