Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0900 ATGTGTGGGATCGCTTTGATTGTTTCCGGTTTGCGTCTTGATTTATCAGCTCTGCAACTTGATTCCACTTCTTCACCAATTCTTCAGTCAGAGCAAGTGAGTCTAATGAATCCCTTGTTTCTTAGGATTTCTCTATCTTTTTCTTCAAATTGCAAAATATTTGGAGGATTACATGTTGCTTGTGATAGCAATGACGCTGAAGCTCTTCTGCAATTTCTCGGAAATTGCTGCCCCTTCAATTCCAATTTACATAAAAGCAAGTGTTATGATGGCCAGAATAAGCAAGCTACTATTCCGGATGTTCTTTCTACAATTAAAGGGCCGTGGTCAATCATCTACTGGCAAGATAATACAAATACTTTGTGGTTTGGTCGAGATGCATTTGGCCGGAGAAGTCTTCTTGTTCACTGGTCAACTGTGGAGGACATTCGGTCTTTGCTATCTTCCGTGTCACCACCTTTCCACATTGTGCAAAACTCTGGTTGTCAAGCTGAAGATGGGTTTAACGAACTCCATTTTTGGGAAGAGCTTCCTTGTGGGATATATAGTGTGCGTATTGATGCCTCGAAGTCAGACTGTGGTCTGGCCATATACAAGCTCCATGCAGAGCTTGTGCTAGCTGCTCTAAGGCAATCTATGATGCGGCGAACTTCACTGCATACAATTTTCCAGAAACAGGGAGTTACTTCTGACTTCAGAAAAGGGGAGCATGGTCCAGTTGCAGTTCTATTTTCTGGTGGATTGGATTCAGTGATACTTGCAGCATTATCAGATGAGTGCTTAGATCTGAGCTATGAAATTGATTTGATTAATGTGAGCTTTGATGGTCCATCTGCACCTGATAGAATCTCTGCCAAGGCTGGAGTAGAGGAATTGAGAAAAATTGCCCCCCGAAGGATCTGGAAGCTAGTGGAGATTGATGCTGATTTGCAAAACCTGACCTTTGAAACGAAGCATGTCATGTCCCTGATAAACCCTGCAAACACATACATGGACTTGAACATCGGAATAGCCTTATGGCTTGCTGCTGGTGGGGACGGTTGGGTCTATGACGAAATTATAATAATAATAACAAGGATCGTTGGCTCTGGTGCAGATGAACAATGTGCTGGCTATGAGGAATCTGTGGGCTACTGTGCTAGCTGGTTCCGATTACATGAAGAGATGAAACTGGACATGCAAAGAATTTGGAAAAGAAACGTAGGCAGAGATGATAGATGCATAGCTGATAATGGCAAGGAGGCTAGATTTCCTTTCTTGGATGAAGACGCTATAAGGACTTTGCTTGATTTTCCATTGTGGCAAGTTGCCAACCTTGATAAACCTAGTGGTGTAGGTGATAAGAAGATCCTAAGAGAGGCATGCACTTCTTATTCTTCATTTTTCTAA 1389 42.48 MCGIALIVSGLRLDLSALQLDSTSSPILQSEQVSLMNPLFLRISLSFSSNCKIFGGLHVACDSNDAEALLQFLGNCCPFNSNLHKSKCYDGQNKQATIPDVLSTIKGPWSIIYWQDNTNTLWFGRDAFGRRSLLVHWSTVEDIRSLLSSVSPPFHIVQNSGCQAEDGFNELHFWEELPCGIYSVRIDASKSDCGLAIYKLHAELVLAALRQSMMRRTSLHTIFQKQGVTSDFRKGEHGPVAVLFSGGLDSVILAALSDECLDLSYEIDLINVSFDGPSAPDRISAKAGVEELRKIAPRRIWKLVEIDADLQNLTFETKHVMSLINPANTYMDLNIGIALWLAAGGDGWVYDEIIIIITRIVGSGADEQCAGYEESVGYCASWFRLHEEMKLDMQRIWKRNVGRDDRCIADNGKEARFPFLDEDAIRTLLDFPLWQVANLDKPSGVGDKKILREACTSYSSFF 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7020545 7023728 - Conep19aG0092500.1 Cone19ag0900 459337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0900 462 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 62 138 IPR029055 -
Cone19ag0900 462 Gene3D HUPs 199 460 IPR014729 -
Cone19ag0900 462 Pfam Asparagine synthase 382 458 IPR001962 GO:0004066(InterPro)|GO:0006529(InterPro)
Cone19ag0900 462 PANTHER ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 202 455 IPR051857 -
Cone19ag0900 462 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 236 457 - -
Cone19ag0900 462 CDD Asn_Synthase_B_C 237 454 IPR001962 GO:0004066(InterPro)|GO:0006529(InterPro)
Cone19ag0900 462 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 45 167 IPR029055 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0903 Cone-Chr13:7968958 Cone19ag0900 Cone-Chr19:7020545 5.51E-251 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0900 - - - 0.0