Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0903 ATGGCCTATTTAGTGTGCTTAGTCGTTCTCTTGTCCCTCTTTAGCTATTCGAGTGCTAACTACTGCATGTGCAAGGATGGAGTGAGCAACCAAGCTCTTCAGAAGGCGATTGATTATGCTTGTGGAGCAGGAGCTGACTGCTCTCCCATTCTCTCAACTGGGGCTTGTTATCAGCCAAACACAGTGAAAAATCACTGTGATTTTGCTGTTAATAGCTACTTCCAAAAAAAAGGTCAAGTTTCCGGCAGCTGTGATTTTGCAGGAGCTGCTTCCCCTTCTGTTACTGCTCCCGCTGCATCTACTGGTACTTGTGTTTATCCTGCTAGCCCCAGCACTGGAGGTACTGCTCCGAGCACCACCACACCATCAACCACCACCCCGAGCACCACCACACCATCAACCACCACCCCGAGCACCACCACGCCGTCCACCACGACTCCGTCCACAACAACCCCTTCCACCACCACAAATCCCACCACATCTACCTCTCCGACCACCACCTCCACAACTCCTACTGTGTTTGGGTCAGGGATAAGCCCATCCGGAACAGGCCTCGATGGGAGTGGAGCTGTGGCCCACACTCAACTCACCAGTCTCTTCTTCTGCTCTCTAGCACTCTACATTTCCGGCTGCTGCTTCCTGCTTTGGGCCTGA 654 52.75 MAYLVCLVVLLSLFSYSSANYCMCKDGVSNQALQKAIDYACGAGADCSPILSTGACYQPNTVKNHCDFAVNSYFQKKGQVSGSCDFAGAASPSVTAPAASTGTCVYPASPSTGGTAPSTTTPSTTTPSTTTPSTTTPSTTTPSTTTPSTTTPSTTTNPTTSTSPTTTSTTPTVFGSGISPSGTGLDGSGAVAHTQLTSLFFCSLALYISGCCFLLWA 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7037382 7039167 - Conep19aG0092900.1 Cone19ag0903 459340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0903 217 PANTHER BETA-1,3 GLUCANASE 12 108 IPR044788 -
Cone19ag0903 217 SMART X8_cls 20 106 IPR012946 -
Cone19ag0903 217 Pfam X8 domain 21 91 IPR012946 -
Cone19ag0903 217 Gene3D - 15 111 - -
Cone19ag0903 217 MobiDBLite consensus disorder prediction 111 180 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0903 Cone-Chr19:7037382 Cone6ag1096 Cone-Chr6:6789928 2.90E-22 dispersed
Cone13ag0909 Cone-Chr13:7997567 Cone19ag0903 Cone-Chr19:7037382 8.43E-78 wgd
Cone13ag0038 Cone-Chr13:228804 Cone19ag0903 Cone-Chr19:7037382 4.50E-36 wgd
Cone16ag0202 Cone-Chr16:1333894 Cone19ag0903 Cone-Chr19:7037382 9.54E-36 wgd
Cone19ag0903 Cone-Chr19:7037382 Cone2ag0806 Cone-Chr2:34067696 7.84E-36 wgd
Cone19ag0903 Cone-Chr19:7037382 Cone6ag0530 Cone-Chr6:2634454 9.55E-48 wgd
Cone19ag0903 Cone-Chr19:7037382 Cone9ag0544 Cone-Chr9:2599542 2.06E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0903 - - - 0.0