Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0916 ATGTTACTTTTTCATGGCTCCCCTACAAATAAACATTTTCACAGAAAGAACAAATTTTCAGAGCAGATTTTCGGTCCAAGAATGGAGACTTTGGTTAAGCAGATAAAGCCTGTGAGGGAGAGAGATTCCGGGCCAGGACGTGAGAATATAGGAGATCCTACCGGCAGGAGGGACAAAAGATTACCGTCCCCAAAAGAACAATCTTTCAAAGAGAAGAAGAAATCACAGAGTTGGTTGAGAAGACAATTTTTTAGGGAAGTAAGTGAAGATCAGAAGGTCATCGACCACGAAACAGCAATGGCAGCTGCTGTATTTGCTGTTCACTCAAAAGAAGAAAACATTCGTGTCCCCAACCAGGATAAGAAGAAGACAACAGAGGATCCTGGAAAAACCTCCGTAAAAGAGATCAGTATCGAAAAGGAACTAGATATTACAACTCCGGTTTCAAAACTCGGTAGAGTTTCAAAACGATTCGCAGATTTATTGAGAAGCACGGAAGGGGGAACAGACGATGAGATAGTGGTTACTGCAGTTGGATACGGTGGAGAGGGGCCGGAAGAAACAGGAGGTGGTTCTGCTTCAGCCTCTTCAACGAAGAAGACTCCAACTTTTACAGATAAGAAAGTAGAAAGCTCCATCCAGAAAGCACCTGTAAATGCAGCTCCAAAACCTGCAACTTTTCCGGCTGAAACCAAAATGCAGGATTCAAAAACAACAAGAGCTGTAGGTGTTAGAGATGGAGATATAGATGCTTGGGAAGAGGCTCAATTGGAGAAGATTAAAACAAAGTATAGTAAACAAAATGCTGAAATCCTCACATGGGAGAACGACAAGAAGGTAAATGTCTGGTGCAAACTGGATCAGAAAAAGGATAAGCTGGGAAAGAAGATGGAGAAGGCCATGATGGGGTTTAAGAAAGATAGGGATCGTATAAACCAGATAGCAAAAGAAGCAAGAGCAAAGGTAGACAAAAGTCACAGAAAAGAGGTTGATAAGGTGAAACAGAAGGCAGATGTAATGAGAAAAACAAGAAAAGTCCCTGTAACCTGTTTCTGCTTCTGA 1062 41.9 MLLFHGSPTNKHFHRKNKFSEQIFGPRMETLVKQIKPVRERDSGPGRENIGDPTGRRDKRLPSPKEQSFKEKKKSQSWLRRQFFREVSEDQKVIDHETAMAAAVFAVHSKEENIRVPNQDKKKTTEDPGKTSVKEISIEKELDITTPVSKLGRVSKRFADLLRSTEGGTDDEIVVTAVGYGGEGPEETGGGSASASSTKKTPTFTDKKVESSIQKAPVNAAPKPATFPAETKMQDSKTTRAVGVRDGDIDAWEEAQLEKIKTKYSKQNAEILTWENDKKVNVWCKLDQKKDKLGKKMEKAMMGFKKDRDRINQIAKEARAKVDKSHRKEVDKVKQKADVMRKTRKVPVTCFCF 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7094997 7096794 + Conep19aG0094200.1 Cone19ag0916 459353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0916 353 Coils Coil 257 277 - -
Cone19ag0916 353 MobiDBLite consensus disorder prediction 181 242 - -
Cone19ag0916 353 MobiDBLite consensus disorder prediction 32 76 - -
Cone19ag0916 353 MobiDBLite consensus disorder prediction 190 212 - -
Cone19ag0916 353 PANTHER OS02G0116800 PROTEIN 66 352 - -
Cone19ag0916 353 MobiDBLite consensus disorder prediction 33 76 - -
Cone19ag0916 353 Pfam Remorin, C-terminal region 248 348 IPR005516 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0918 Cone-Chr13:8038938 Cone19ag0916 Cone-Chr19:7094997 1.80E-99 wgd
Cone19ag0916 Cone-Chr19:7094997 Cone6ag0545 Cone-Chr6:2687980 2.03E-14 wgd
Cone19ag0916 Cone-Chr19:7094997 Cone9ag0555 Cone-Chr9:2635339 2.29E-15 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0916 - - - 0.0