Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0973 ATGGAGAAATGGGGTTTGAGTGAAACTAAGCTGAAGCTGAAGAACAATGATAATAAGGAAGGTAGTCATGCAGAAGGTGGAGGGGAAGAGGAAAGTGGTTGTTGGGTTGCTTGGAAAATTTTTGGAAGCTGCATTTCTTCAGGATCCAAAGTTGATAGTTCTGCAACTGGAACTATTTCTGCTCAAACTAAATCAACGGCAAATACAAGCCGAGACCATCCAACTGCTCCCATAATCGCGTCCTCTAGTACTATAACTACTACTATTACTACTACGACTACAACTACAACTAGTACTAGTAATGTTGAAAGTAGTTGGTCCCCTTTCAAAACTGAAGGAAAAACCGAAGAAGAGCTTAAAATTTCAACTGGTCTATGGAAATTTTCATTCAATGATCTTAAGCAGGCTACTAGAAACTTCCGGCCGGAAAGTCTTCTTGGTGAAGGTGGTTTTGGTTGTGTCTTCAAAGGATGGGTCGAAGAAAACGGAACTGCTCCAGTCAAACCCGGAATGGGACTAACTGTTGCGGTCAAGACGCTCAACCTTGAAGGCCTTCAAGGACACAAAGAATGGATGGCGGAAGTTAGTTTTCTAAGTGACCTTATACATCCTAACCTGGTTAAACTTATCGGGTATTGCAATGAAGATGATCAACGGTTGCTCGTGTATGAATTCATGCCTCGGGGTAGCTTAGAGAATCACCTGTTCCGGAGGTCCTTACCGCTTCCTTGGTCTATAAGGATGAAAATCGCTCTTGGTGCTGCAAAGGGACTTGCTTTTCTTCATGAGGAGGCGGCAAGGCCAGTGATCTACAGGGATTTTAAGACATCAAATATTCTATTAGATGCGGAATACAATTGCAAGCTTTCTGATTTCGGACTTGCCAAAGACGGGCCCGAGGGAGACAAGACTCATGTCTCGACCCGTGTAATGGGAACTTATGGTTATGCGGCCCCGGAATATGTAATGACCGGGCATCTTACTACAAAGAGTGACGTTTATAGTTTTGGAGTGGTTTTGCTTGAGATGCTGACCGGAAGAAGATCTATGGACAAACATCGACCAAACGGGGAACAGAATCTTGTGGCGTGGACCCGGCCTTACCTTGCAGACAGAAAGAGATTCTATCGCTTGATTGACCCCAGGCTTGAAGGTCACTTCTCCATAAAAGGTTCCCAAAAGCTCGTGCACTTGACTGCTGTTTGTCTTAACCGGGATGCTAAAGCCCGGCCTAAGATGAGTGAAATTGTCGAAATGTTAAAGCCTCTGCAGAACCTCAAGGACATGGCCTGTTCATCTTATTCGTTCCAGACAATGCAAGCGGATCGTGCGGGACCTAACTCTGCTGCTCGAAATGGGGCCCTTGGGCCTGGTGGGCCGGGTCCAAAGAATGGGCAGTAA 1401 45.54 MEKWGLSETKLKLKNNDNKEGSHAEGGGEEESGCWVAWKIFGSCISSGSKVDSSATGTISAQTKSTANTSRDHPTAPIIASSSTITTTITTTTTTTTSTSNVESSWSPFKTEGKTEEELKISTGLWKFSFNDLKQATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGMGLTVAVKTLNLEGLQGHKEWMAEVSFLSDLIHPNLVKLIGYCNEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAARPVIYRDFKTSNILLDAEYNCKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTTKSDVYSFGVVLLEMLTGRRSMDKHRPNGEQNLVAWTRPYLADRKRFYRLIDPRLEGHFSIKGSQKLVHLTAVCLNRDAKARPKMSEIVEMLKPLQNLKDMACSSYSFQTMQADRAGPNSAARNGALGPGGPGPKNGQ 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7376643 7379504 - Conep19aG0100500.1 Cone19ag0973 459410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0973 466 MobiDBLite consensus disorder prediction 442 466 - -
Cone19ag0973 466 SUPERFAMILY Protein kinase-like (PK-like) 127 436 IPR011009 -
Cone19ag0973 466 Pfam Protein tyrosine and serine/threonine kinase 144 420 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0973 466 FunFam Probable serine/threonine-protein kinase PBL8 226 441 - -
Cone19ag0973 466 MobiDBLite consensus disorder prediction 62 84 - -
Cone19ag0973 466 ProSitePatterns Protein kinases ATP-binding region signature. 146 178 IPR017441 GO:0005524(InterPro)
Cone19ag0973 466 PANTHER OS01G0588500 PROTEIN-RELATED 102 425 IPR050823 -
Cone19ag0973 466 CDD STKc_IRAK 146 423 - -
Cone19ag0973 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0973 466 FunFam Serine/threonine-protein kinase BIK1 107 225 - -
Cone19ag0973 466 MobiDBLite consensus disorder prediction 90 109 - -
Cone19ag0973 466 ProSiteProfiles Protein kinase domain profile. 140 424 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0973 466 Gene3D Transferase(Phosphotransferase) domain 1 226 442 - -
Cone19ag0973 466 Gene3D Phosphorylase Kinase; domain 1 100 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0973 Cone-Chr19:7376643 Cone7ag0529 Cone-Chr7:2457001 3.45E-195 dispersed
Cone13ag0981 Cone-Chr13:8329200 Cone19ag0973 Cone-Chr19:7376643 7.97E-290 wgd
Cone16ag0870 Cone-Chr16:9177028 Cone19ag0973 Cone-Chr19:7376643 1.98E-210 wgd
Cone19ag0973 Cone-Chr19:7376643 Cone2ag0855 Cone-Chr2:34546743 4.17E-129 wgd
Cone19ag0973 Cone-Chr19:7376643 Cone2ag0176 Cone-Chr2:931601 2.46E-211 wgd
Cone19ag0973 Cone-Chr19:7376643 Cone2ag0493 Cone-Chr2:2676203 5.48E-46 wgd
Cone19ag0973 Cone-Chr19:7376643 Cone6ag0626 Cone-Chr6:3169346 1.08E-103 wgd
Cone19ag0973 Cone-Chr19:7376643 Cone9ag0627 Cone-Chr9:2988239 2.67E-105 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82402 PF00069 Pkinase 7.70E-45 CL0016 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0973 - - - 0.0