Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1031 ATGTCTTCTTCTTCAGATGCTTCTTCTCCTGCCGAGCAGGATTCTCCGCCCAGTTCTTACGGAAGCTTTACTCCTCCACCAGAATCAACCTTAGACCCACCCTTAAACAAAGACAGCCCTCCTCCTCCAAGTGATCAATCCTCAACTCCATCCCCCGATCAAAGTGGTGGCGGTTCTTCATCGTCTCCCCCAAACCCCTCTCCTGATCCACCAAATTCTCCTCCACCATCTTTACCACTGCCCTCTCCCCGGCCTAAGTCACCGCCACCCTCATCCCCTCCTCCTAGTGAAACCCCATCACTACCTTCACCATCACCAGAATCTTCAAAATCACCACCCTCGCGATCAAAAACTCCTAAGTCACCTCCCCCATCACCGTCAAAAGACCATGGTGATGATGGTGATGATTCATCCAAGCGCTCACCGCCACCATCCACAACACCCTCACCACCACGATCATCACCAGCCCCTCCAACCTCTGACAACTCCCCCCCTCCGGCTGAAAAATCCCCTACACAAGATTTCAAAAGCCCTCCAGTACCACCTGCTTCAGGCCCTCCTGGACCAAACATAAATCCTACCTCAGGAACACCCGATACGAACCCAAACCTGACCCCTGCAAATTCTAGTGCGGATGCATCTTTGAAAACTCCTTCTGAATCAAATTCACATTCATCAGCCAATTCAGGTGACTCCAGTTCTCCTCCACCGGCGTCTGAATCATTATCTTCGTCGAGTTCCCTTCTGGCATTAGCTATCAGTATGGCTGTGCTTGCAGTGGTCATCATTGCAGTTTTATGTCTCATTTTTTTCTTTTGTCGGAGAAAAAAACACTATCGTTCTTACGTCCATGCTGCCCCACTCTACAAAACCTCGGATGGAAATTACTACCCACCGCAACATACCGGTATCTATTCGAGCCCACACGATCCCTACTACACTCAAGGCTCTAACCCTTCTTATGTAGACAGCTATGGAAGTGGCAATCCATATCAGGGACCCGATATGGCAAATTCAAAGTCCTTCTTTAGCTACGAGGAGTTAATGGAAATTACATGCGGATTTACCAGCGAGAATATTCTGGGGGAAGGTGGTTTTGGTGCGGTTTACAAGGGTTTCTTGTCGGACGGAAAAGTGGTGGCGGTTAAGCAGTTGAAGGCGGGCAGTGGTCAGGGGGAGAGAGAGTTCCGGGCAGAGGTTGAAATTATCAACCGTGTTCATCACCGGCATTTGGTGTCTCTGGTTGGTTACTGTATCTCGGACCATCATAGGCTGCTTATCTATGAATTTGTTCCTAATAATACACTTGAGCACCATTTGCATGCCAAAGGAATTCCGGTGTTGGATTGGAGTAAAAGGATGAAGATTGCTGTAGGAGCTGCCAAGGGTTTGGCTTACTTGCATGAAGATTGCCATCCAAAAATTATTCACAGAGACATTAAGTCCGCAAATATTCTATTAGATGATGTATATGAAGCTCAGGTAGCAGATTTTGGGCTTGCCAAACTATCAAATGATACTGGGACCCATGTTTCAACTCGGGTCATGGGTACATTCGGATACATGGCACCAGAGTACGCATCGAGTGGGAAATTAACAGATAGATCAGATGTATTCTCATTTGGAGTTGTGCTCTTAGAGCTCTTAACCGGACATAAACCCGTCGACCCGACCCTGCCTTTGGGTGATGAGAGTTTGGTTGAATGGGCTCGTCCCATGCTTAGTCAAGCCCTAAAAAGTGGTGAGGTAGGCGAGTTAGTCGATCCAAAGCTTGAAAAACAGTATGTAGAAAGTGAACTTTTCAGAATGATAGAAGCTGCTGCTGCCTGTGTTCGCCATTCTGCTGGTAAACGACCTCGTATGGCTCAGGTGGTGAGGGCATTAGACACAGATGGTGGGTATGACCTCTCAGATGGGATGAAGTATGGACAGAGCACAGTGTATGAGTCTGGTCAATACAAACAGGACATAATGAAGTTCAGGATGATGGCACTAGAGGGCATAGGAGACAGCTCTGAGTATAATAACTGCAGTGGAGATTATGCGACCAAAGAACTTTCTGGACCTCTGGATAATTGGAAGTCTCCGGAATGTTCGAGCGGTGAATTAGAAACCAGAGCTTTTACTGGTTCCAAAAAGAGCCACACCTCTCGTCGGTTTTAA 2163 47.57 MSSSSDASSPAEQDSPPSSYGSFTPPPESTLDPPLNKDSPPPPSDQSSTPSPDQSGGGSSSSPPNPSPDPPNSPPPSLPLPSPRPKSPPPSSPPPSETPSLPSPSPESSKSPPSRSKTPKSPPPSPSKDHGDDGDDSSKRSPPPSTTPSPPRSSPAPPTSDNSPPPAEKSPTQDFKSPPVPPASGPPGPNINPTSGTPDTNPNLTPANSSADASLKTPSESNSHSSANSGDSSSPPPASESLSSSSSLLALAISMAVLAVVIIAVLCLIFFFCRRKKHYRSYVHAAPLYKTSDGNYYPPQHTGIYSSPHDPYYTQGSNPSYVDSYGSGNPYQGPDMANSKSFFSYEELMEITCGFTSENILGEGGFGAVYKGFLSDGKVVAVKQLKAGSGQGEREFRAEVEIINRVHHRHLVSLVGYCISDHHRLLIYEFVPNNTLEHHLHAKGIPVLDWSKRMKIAVGAAKGLAYLHEDCHPKIIHRDIKSANILLDDVYEAQVADFGLAKLSNDTGTHVSTRVMGTFGYMAPEYASSGKLTDRSDVFSFGVVLLELLTGHKPVDPTLPLGDESLVEWARPMLSQALKSGEVGELVDPKLEKQYVESELFRMIEAAAACVRHSAGKRPRMAQVVRALDTDGGYDLSDGMKYGQSTVYESGQYKQDIMKFRMMALEGIGDSSEYNNCSGDYATKELSGPLDNWKSPECSSGELETRAFTGSKKSHTSRRF 720
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7670104 7672691 + Conep19aG0106300.1 Cone19ag1031 459468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1031 720 Gene3D Transferase(Phosphotransferase) domain 1 431 635 - -
Cone19ag1031 720 FunFam proline-rich receptor-like protein kinase PERK8 431 642 - -
Cone19ag1031 720 MobiDBLite consensus disorder prediction 143 193 - -
Cone19ag1031 720 MobiDBLite consensus disorder prediction 1 19 - -
Cone19ag1031 720 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1031 720 MobiDBLite consensus disorder prediction 20 48 - -
Cone19ag1031 720 Pfam Protein tyrosine and serine/threonine kinase 358 628 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1031 720 Gene3D Phosphorylase Kinase; domain 1 328 430 - -
Cone19ag1031 720 ProSiteProfiles Protein kinase domain profile. 355 634 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1031 720 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524(InterPro)
Cone19ag1031 720 MobiDBLite consensus disorder prediction 63 109 - -
Cone19ag1031 720 MobiDBLite consensus disorder prediction 194 243 - -
Cone19ag1031 720 SUPERFAMILY Protein kinase-like (PK-like) 334 628 IPR011009 -
Cone19ag1031 720 FunFam Proline-rich receptor-like protein kinase PERK8 328 430 - -
Cone19ag1031 720 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 217 663 IPR047117 -
Cone19ag1031 720 SMART serkin_6 355 628 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1031 720 CDD STKc_IRAK 361 629 - -
Cone19ag1031 720 MobiDBLite consensus disorder prediction 1 243 - -
Cone19ag1031 720 MobiDBLite consensus disorder prediction 693 720 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1031 Cone-Chr19:7670104 Cone2ag0408 Cone-Chr2:2164959 1.74E-160 dispersed
Cone12ag0645 Cone-Chr12:5901197 Cone19ag1031 Cone-Chr19:7670104 1.38E-183 wgd
Cone13ag1041 Cone-Chr13:8618068 Cone19ag1031 Cone-Chr19:7670104 2.16E-286 wgd
Cone19ag1031 Cone-Chr19:7670104 Cone8ag0663 Cone-Chr8:6652064 6.34E-182 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82405 PF14543 TAXi_N 9.30E-28 CL0129 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1031 - - - 0.0