Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone19ag1074 | ATGTCGAAGCCATGGGGTGGTATCGGAGCTTGGGCGGCGGAGGCGGAGCGAGCCGAAGAAGAAGAACGTGAGGCCGCAGCGGCGGTGGCGGCTTCACAAGTTGAGTCTCAGAGCTTTCCTAGTCTTAAGGAAGCCGTGACCGCGAAACCTAAGAAGAAGAAAATGACGCTATCGGAGTTCACGATGGGAAGCTATACGAATTCTGGAGCCGGAAGTCGGATCAATGAGAACAAAGGCTTGACGACGGAGGAGATGCTCCGCCTTCCGACAGGTCCAAAGGAAAGGTCCGCCGAGGAAATGCAGTATAATCGACTAGGAGGTGGATTTTCATCATATGGAGGGCGTTCAGGTCCGCCTCAGGGCCGTATGAGGGACCATGAAGAGAGCGGTGGGTCTTGGGGCGGTGGTGGAAGAAGATCATACGGTGGATTTGACGATGAACGTAGAGGTCCTTCTTCTAGGGTTTCTGATTTCGATCAATCTTCTAGGGCGGATGAGGTTGATAACTGGGCAATGGCGAAGAAATCTCTTCCTGCTTTTGATTCTGGTCGTCAAAATCGTTATGGTTCGCTTGGTAGTGGTGGTATGGGCGGTGGAGGAGGAGGAGGAGGTTTTTCTAGGGCTGATGAGGTTGATAATTGGGCTAATGGGAAAAAGCCTCCTCCTCCTAGTAGATCTTCCACATTTGGTTCTGGTTTTCGCGATTCTGTTGAGCCTGATCGTTGGAGTGGAGGAGGAGGATTCCGGGAGGATGAACGTGAAAGGCCGAGATTGGTTTTGGATCCTCCAAAAGGCAATGTGGTTCAGAATGAACCTGAGCAACAGGTGAAATTGAACAAGCCTAATCCATTTGGGGCTGCAAAGCCTAGGGAAGAAGTTCTGGCTGAGAAGGGGTTGGATTGGAAGAAACTGGACTTAGAAATTGAGGCCAAAAAGATGAGTAGGCCGACCAGCTCTCATTCAAGCAGGCCATCAAGTGCGCAGTCAAGCCGGTCTGAGACTCAAGGCTTGCAGGGAGTAGAAAATGTGGTGAAGCCGACAAGGCCAAGGCTCAATCCATTTGGGGATGCCAAACCTAGGGAAGTTTTGCTGGAGGAGAAGGGCAAGGATTGGCGAAAGATTGATCAACAACTCGAGCGTCGTGGTGTTTACAGGCCTGAAGCAGAGGAGGAAAAGATTTTGAAACAAGAAATAGATAATTTAAAGGAAGAACTTGAGAAAGAAGTTGCAAACAAGGGAACTGTATCAGAGTCAGCTGGAAATCAACCTAATTTACATGACATACTTGTTCAAAAAGAAAGAGAACTAGAGATTCTGCGCTGTGATCTAGATGAAAAAGTTCGTTTTGTGCAGAAACCATTTGAACGGCCCAGTTCTGGAGCTGGTAGGGCTGCTGGTTTTCCAGACAGACCATCTTCTCAATCTGGGTCATTTGATGAATCCAGAAGCTTCGAGCCCATGGATAGGCCTAGATCGCGTGGTCACGGCGATGCATGGAGTAGGCCTTTTGAAGACCAAAGAGGATTTCAAGGAGGCAATAATAGAGGTTTTCTTGGCAACAGAGATTCAGATAGGTCTAGATCGAGGGATCGATGGTGA | 1599 | 49.09 | MSKPWGGIGAWAAEAERAEEEEREAAAAVAASQVESQSFPSLKEAVTAKPKKKKMTLSEFTMGSYTNSGAGSRINENKGLTTEEMLRLPTGPKERSAEEMQYNRLGGGFSSYGGRSGPPQGRMRDHEESGGSWGGGGRRSYGGFDDERRGPSSRVSDFDQSSRADEVDNWAMAKKSLPAFDSGRQNRYGSLGSGGMGGGGGGGGFSRADEVDNWANGKKPPPPSRSSTFGSGFRDSVEPDRWSGGGGFREDERERPRLVLDPPKGNVVQNEPEQQVKLNKPNPFGAAKPREEVLAEKGLDWKKLDLEIEAKKMSRPTSSHSSRPSSAQSSRSETQGLQGVENVVKPTRPRLNPFGDAKPREVLLEEKGKDWRKIDQQLERRGVYRPEAEEEKILKQEIDNLKEELEKEVANKGTVSESAGNQPNLHDILVQKERELEILRCDLDEKVRFVQKPFERPSSGAGRAAGFPDRPSSQSGSFDESRSFEPMDRPRSRGHGDAWSRPFEDQRGFQGGNNRGFLGNRDSDRSRSRDRW | 532 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 19 | 7844600 | 7848395 | - | Conep19aG0110700.1 | Cone19ag1074 | 459511 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone19ag1074 | 532 | MobiDBLite | consensus disorder prediction | 244 | 260 | - | - | |
| Cone19ag1074 | 532 | Pfam | Plant specific eukaryotic initiation factor 4B | 1 | 516 | IPR010433 | GO:0003743(InterPro) | |
| Cone19ag1074 | 532 | MobiDBLite | consensus disorder prediction | 141 | 170 | - | - | |
| Cone19ag1074 | 532 | Coils | Coil | 15 | 35 | - | - | |
| Cone19ag1074 | 532 | MobiDBLite | consensus disorder prediction | 317 | 341 | - | - | |
| Cone19ag1074 | 532 | MobiDBLite | consensus disorder prediction | 450 | 532 | - | - | |
| Cone19ag1074 | 532 | MobiDBLite | consensus disorder prediction | 482 | 502 | - | - | |
| Cone19ag1074 | 532 | MobiDBLite | consensus disorder prediction | 62 | 79 | - | - | |
| Cone19ag1074 | 532 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 1 | 447 | IPR010433 | GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER) | |
| Cone19ag1074 | 532 | MobiDBLite | consensus disorder prediction | 62 | 298 | - | - | |
| Cone19ag1074 | 532 | MobiDBLite | consensus disorder prediction | 310 | 361 | - | - | |
| Cone19ag1074 | 532 | Coils | Coil | 388 | 411 | - | - | |
| Cone19ag1074 | 532 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone13ag1084 | Cone-Chr13:8813003 | Cone19ag1074 | Cone-Chr19:7844600 | 1.04E-300 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone19ag1074 | K03258 | - | csv:101206526 | 593.193 |