Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1115 ATGGCTACCTACTTCGGGATGCTTCTAAGAGTATTCCGGAATCTCATCAACGAGAGGGTGAATTCGAGAAAGTCTCTCTCTACTGATGATATGCTGGATACTCTGCTCAAGATCAGTGAAAAAAATAGTGAAGAGATGGATAAGACCAAGATCGCACACTTATCTCTGGATCTGTTTGCTGCCGGGACCGACACATCGACGTCGACAGTAGAATGGGCAATGGCAGAACTACTACGTAACACTCATATCATGTCAAAATCCAAAGTTGAGCTACGAGAGATCATCGGAGAAGGAAATGCCGTTCAAGAATCAGACATTCCTCGTCTCCCTTACCTCCGGGCAATAAGAAAAGAAACTTTCCGGTTATATCCAGCAGTGCCTCTACTCCTGCCCCGAAAAGTCGAAGCAGATGTAGACATCTGTGGATTCACATTGCCGAAAGAAGCAATGATCTTTGTCAATGCGTGGGCAATAGGACGGGATCCGAGCAGGTGGGAGGACTCAGATGTGTTTGATCCCGAAAGGTTTATGGGACCGGGAGCGGAAGTTGATGTTCGGGGGCGGAATTTTGAGCTCATTCCGTTCGGGGGAGGGCGGAGAATATGTCCAGGTTTGCCGTTGGCGATGAGAATGTTGCATGTGATGGTGGGTTCGTTTGTGAATTGCTTTGATTGGAAGCTTGAAGATGGAGTTAGGGCTGAGACAATGTGCATGAAAGCTAAGCCTGGGCTCACCTTGGTAAAATATCAGCCTGTACGAGCTATCCCTTGTCTTCTATCTTTAGACCTTAGTAGTAAGCTAGTGGGTGATTCCTACTAA 819 47.01 MATYFGMLLRVFRNLINERVNSRKSLSTDDMLDTLLKISEKNSEEMDKTKIAHLSLDLFAAGTDTSTSTVEWAMAELLRNTHIMSKSKVELREIIGEGNAVQESDIPRLPYLRAIRKETFRLYPAVPLLLPRKVEADVDICGFTLPKEAMIFVNAWAIGRDPSRWEDSDVFDPERFMGPGAEVDVRGRNFELIPFGGGRRICPGLPLAMRMLHVMVGSFVNCFDWKLEDGVRAETMCMKAKPGLTLVKYQPVRAIPCLLSLDLSSKLVGDSY 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8024764 8025673 - Conep19aG0114900.1 Cone19ag1115 459552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1115 272 Gene3D Cytochrome P450 1 254 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag1115 272 Pfam Cytochrome P450 13 237 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag1115 272 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 195 204 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone19ag1115 272 FunFam Geraniol 8-hydroxylase 5 255 - -
Cone19ag1115 272 PRINTS E-class P450 group I signature 70 96 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag1115 272 PRINTS E-class P450 group I signature 192 202 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag1115 272 PRINTS E-class P450 group I signature 202 225 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag1115 272 PRINTS E-class P450 group I signature 113 131 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag1115 272 PRINTS E-class P450 group I signature 154 178 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag1115 272 PRINTS E-class P450 group I signature 50 67 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag1115 272 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 2 257 - -
Cone19ag1115 272 PRINTS P450 superfamily signature 202 213 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag1115 272 PRINTS P450 superfamily signature 114 125 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag1115 272 PRINTS P450 superfamily signature 193 202 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag1115 272 PRINTS P450 superfamily signature 61 78 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag1115 272 SUPERFAMILY Cytochrome P450 4 254 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0341 Cone-Chr12:1858911 Cone19ag1115 Cone-Chr19:8024764 1.88E-73 dispersed
Cone19ag1115 Cone-Chr19:8024764 Cone13ag1219 Cone-Chr13:9392057 2.06E-71 dispersed
Cone19ag1115 Cone-Chr19:8024764 Cone8ag0346 Cone-Chr8:1982584 1.96E-98 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1115 - - - 0.0