Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1118 ATGATGATGACGATGATGATGATGATGATGAGGAAGAAGAAGAAGAAGAACACGTTCTTCATCATGCTCGGATTACTTTTCTTCTTCTTCCAATTTCTAGCTACTACTTTCGCTCTCACGCCGGACGGTCTCTCTCTCCTCTCTCTAAAATCAGCCGTTGATCAACCATCCGACGCCTTAGCTTTCTCCGACTGGAACGAGGACGACGCCAATCCATGCCACTGGACCGGCATTTCCTGCATGAACGTCAGCACCTCTTCCGATCCTCGCGTCGTCGGAATCTCCATCGCCGGAAGGAATCTCCGGGGGTATCTCCCCTCAGAACTCGGTTCCCTCATCTACCTTCGGCGACTCAACCTCCACAGCAATAACTTCTACGGCTCCTTACCTACACAGCTCTTCAACGCCACCGCATTGCACAGCATCTTCCTCTACGGCAACAATATCTCTGGTCCTCTACCTCCTTCGATCTGCAACATACCTAGGCTCCAAAATCTTGACCTTTCCAACAACTCTCTGTCCGAAACAATCCCTAAGGATTTAAAGAATTGCAAGCAGTTGCAGCGGCTAAACCTCGCTCAGAATAAATTCACTGGCGAAATTCCGGCTGGCATTTGGTCTCAAATGGATAACCTTGTCTTACTCGATCTCTCTTCCAACAACTTCACCGGACCAATTCCGGAAGATATAAGCGCTCTAAAATCACTTTCCGGTACTCTCAATCTTTCTCATAACCATTTAAGCGGTCAAATCCCGAAATCGCTCGGAGATTTGCCCGTAACCGTAAGTTTCGACCTCCGGAATAATAATCTGACCGGAGAAATACCTCAGACGGGGTCATTTGTAAATCAAGGTCCGACTGCATTTCTAGACAATCCTCTATTATGCGGTTTTCCTCTCCAAAAACCGTGTCGGCATTCAGAACAGAGCTCGCCTCAAAGCCCGAATTCAACCCCTGCTTACAACACCACTCCGAAAAAAGGCTTAAGTCCTGGACTGATCATCCTCATATCAGTAGCTGATGCAGCAGGAGTTGCATTCATCGGACTCGTGATCGTGTACATATACTGGAAAAGGAAAGACGATTCAAACGGATGTAGCTGTACACGGAAAGGAAAATTCGGAGGGAATGACAAAACTCAAACCTGCTCCCTCTGTTCATTCCCTTGCATCAGCGGATTCAGAAACGAGGAGGATGAGGGGGAAATGGAGGATTCTGATAAGGCGGAGAGAGGAGGTGGAGAGTTGGTGGCGATAGACAAGGGGTTTACGTTCGAGCTGGACGAGCTGCTTAGGGCATCTGCGTATGTTTTAGGGAAGAGTGGGTTTGGAATAGTGTATAAGGTGGTGCTAGGGAATGGGATTCCGGTGGCGGTTAGGCGGTTAGGGGAAGGAGGGGAGCAGAGGTATAAGGAATTTGTTACGGAGGTGCAGGCGATAGGGAAAGTGAAACATCCTAATGTCGTTAAATTGAGGGCTTACTATTGGGCTCCTGATGAGAAGCTTCTCATTACTGATTTCATCTCCAATGGTAACCTGGCCTCCGCTCTTCGTGGGCGAAGTGGTCAGCCATCAACAAATCTATCATGGTCAATAAAGCTTAAGATCATTAAGGGTACAGCTCGTGGACTGGCTTACCTCCACGAATGCAGTCCAAGAAAATTCGTTCACGGAGACCTCAAACCGACAAACATCCTCCTAGACAATGATTTCCAACCTTACATTTCCGATTTCGGCCTCAACAGACTAATCAGCATCACGGGAAACAATCCTTCCTCGGGCGGCTTTATAGGGGGAGCCCTCCCTTACTTTAACTCAGTACCAACTGAGCGAACTAACAACTACCATTCTCCGGAAGCTAGAGTTCCAGGAAGCAGGCCGGCCCAAAAATGGGACGTGTATTCATTCGGGGTTGTTGTATTGGAATTGCTCACAGGCAAGTCGCCTGAGCTTTCCCCTAACACGTCGACTTCTGTGGAAGTTCCGGATATCGTGAGGTGGGTGAGGAAAGGATTTGAAGAAGAGAATCCGCTTTCTGACATGGTGGATCCTATGTTGCTTCAAGAGGTTCATGCTAAGAAAGAAGTTGTTGCTGTTTTTCATGTGGCGCTTGCTTGTACTGAAGCAGATGCTGATATTCGTCCTAGGATGAAAACTGTTTCTGAAAATCTTGACAGGATCGGAGCTTAG 2190 47.85 MMMTMMMMMMRKKKKKNTFFIMLGLLFFFFQFLATTFALTPDGLSLLSLKSAVDQPSDALAFSDWNEDDANPCHWTGISCMNVSTSSDPRVVGISIAGRNLRGYLPSELGSLIYLRRLNLHSNNFYGSLPTQLFNATALHSIFLYGNNISGPLPPSICNIPRLQNLDLSNNSLSETIPKDLKNCKQLQRLNLAQNKFTGEIPAGIWSQMDNLVLLDLSSNNFTGPIPEDISALKSLSGTLNLSHNHLSGQIPKSLGDLPVTVSFDLRNNNLTGEIPQTGSFVNQGPTAFLDNPLLCGFPLQKPCRHSEQSSPQSPNSTPAYNTTPKKGLSPGLIILISVADAAGVAFIGLVIVYIYWKRKDDSNGCSCTRKGKFGGNDKTQTCSLCSFPCISGFRNEEDEGEMEDSDKAERGGGELVAIDKGFTFELDELLRASAYVLGKSGFGIVYKVVLGNGIPVAVRRLGEGGEQRYKEFVTEVQAIGKVKHPNVVKLRAYYWAPDEKLLITDFISNGNLASALRGRSGQPSTNLSWSIKLKIIKGTARGLAYLHECSPRKFVHGDLKPTNILLDNDFQPYISDFGLNRLISITGNNPSSGGFIGGALPYFNSVPTERTNNYHSPEARVPGSRPAQKWDVYSFGVVVLELLTGKSPELSPNTSTSVEVPDIVRWVRKGFEEENPLSDMVDPMLLQEVHAKKEVVAVFHVALACTEADADIRPRMKTVSENLDRIGA 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8033697 8036568 + Conep19aG0115200.1 Cone19ag1118 459555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1118 729 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 39 207 - -
Cone19ag1118 729 Pfam Protein kinase domain 437 656 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1118 729 SUPERFAMILY Protein kinase-like (PK-like) 437 723 IPR011009 -
Cone19ag1118 729 Gene3D Ribonuclease Inhibitor 41 206 IPR032675 -
Cone19ag1118 729 CDD STKc_IRAK 438 727 - -
Cone19ag1118 729 SUPERFAMILY L domain-like 42 301 - -
Cone19ag1118 729 Gene3D Transferase(Phosphotransferase) domain 1 508 729 - -
Cone19ag1118 729 MobiDBLite consensus disorder prediction 303 324 - -
Cone19ag1118 729 FunFam Leucine-rich repeat receptor-like protein kinase 415 507 - -
Cone19ag1118 729 MobiDBLite consensus disorder prediction 304 324 - -
Cone19ag1118 729 FunFam Os07g0541700 protein 518 595 - -
Cone19ag1118 729 SMART serkin_6 436 704 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1118 729 ProSiteProfiles Protein kinase domain profile. 432 704 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1118 729 Gene3D Ribonuclease Inhibitor 207 304 IPR032675 -
Cone19ag1118 729 Pfam Leucine Rich Repeat 239 258 IPR001611 GO:0005515(InterPro)
Cone19ag1118 729 Pfam Leucine Rich Repeat 139 159 IPR001611 GO:0005515(InterPro)
Cone19ag1118 729 Pfam Leucine rich repeat 161 222 IPR001611 GO:0005515(InterPro)
Cone19ag1118 729 FunFam Leucine-rich repeat receptor-like protein kinase 211 306 - -
Cone19ag1118 729 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Cone19ag1118 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 555 567 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1118 729 Gene3D Phosphorylase Kinase; domain 1 421 507 - -
Cone19ag1118 729 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 185 727 IPR046959 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0063 Cone-Chr10:374393 Cone19ag1118 Cone-Chr19:8033697 9.89E-108 dispersed
Cone19ag0808 Cone-Chr19:6465061 Cone19ag1118 Cone-Chr19:8033697 1.53E-120 dispersed
Cone19ag1118 Cone-Chr19:8033697 Cone6ag0425 Cone-Chr6:2063811 3.73E-118 dispersed
Cone13ag1137 Cone-Chr13:9007123 Cone19ag1118 Cone-Chr19:8033697 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82409 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1118 - - - 0.0