Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1123 ATGGGGGTTCCGCATGCAATGGAATTACTTAGAGAAAGAGCGTCGTTCGTGAGGGACTCTCTGCATAAGAGCCAAACCATCACTGATAACATGGTTTCCATTCTTGGCTCCTTCGACTACCGTCTTTCCGCCCTCGAAACTGCCGTTCGTCCAACTCAGATAAGAACGCATTCGATTCGGAGAGCTCATGAGAATATTGATAGGACTTTGAAGGCGTCGGAAGTTATCTTGGCTCAATTCGACCTCTCTCGGAAGGCAGAGGCTAAAATACTGAGGGGACCACATGAGGACCTAGAAAGCTACCTGGAAGCCATTGATCAGTTGAGAAGCATTGTTCAGTTTTTCACCGGCACCAAAAAATACAAGGGTTGTGAGGGAGTGCTTAACCACACAAATAATTTGCTTTCTAAAGCTATCTCAAAGCTAGAGGAAGAATTCAGACAGCTTTTAACTATTTACAGTAAGCCCATGGAACCTGATCTTCTTTTTGATTGTCTTCCCCAATCTCTACGCCCAGCATCGGAAACGTCAAACCAACAAGGTGATGCCAATGGAAAAGTGCATAAGAAAAGCTTGGAACATACTACCTACACCACTCCAAATCTTATTCCGTCTAGGGTTCTACCCTTGCTCCACGATTTGACCCAACAAATGGTTCTAGCCGGCCATCAGCAGCAGGTGTTTAGAATATACAGGGACATTCGTGCTTCAGTTTTGGAACAGAGTCTTAGGAAACTAGGCGTAGAGAGGCTTAGTAAAGATGATGTCCAGAAAATGCAGTGGGAGGCTCTGGAGGCCAAGATTGGGAATTGGATACATTACATGCGGATTGCTGTCAAACTGCTGTTTGCTGGGGAAAAGAAAATCTGTGATCAGATATTTGTTGGTGTTGAGTCTCTCAAGGATCAATGTTTTGCTGAAGTGACTGCCAATAGCATTTCGGTGCTACTAAGTTTTGGAGAGGCGATTGCTAAAAGCAAGAGATCGCCTGAAAAGTTATTTGTTCTTCTAGACATGTTTGAGATTATGAGAGAACTCCAAACGGAGATTGAACAACTTTTTGGAGGTAAAGCATGCAGTGAAATGAAAGAATCTGCATTCAATTTGACAAAGCGTCTAGCTCAGACGGCCCAGGAGACCTTTGGTGATTTTGAGGAAGCCGTTGAAAAAGATGCAACAAAAACTGCTGTCCTTGATGGAACTGTCCATCCTTTGACTAGCTATGTTATAAACTATGTCAAGTTTTTGTTCGACTATCAATCAATTCTAAAGCAGCTTTTTCAAGACTTTGAAGAGGGTGATCCTGAATCTCACCTCGCATCCATAACAACAAGAATCATGGCGGCTCTCCAGAACAATCTAGATGGGAAATCCAAGCTGTATAAAGATTCTGCATTAACACAACTATTTCTTATGAACAACATTCACTATATCGTGAAATCCGTTCGGAGGTCAGAAGCAAAGGATTTGTTGGGAGATGATTGGGTGCAGATTCACCGAAGAATTGTGCAGCAGCATGCAAATCAGTATAAGAGGATTTCTTGGGCAAAGATATTGCAATGCGTCACGGTTCAAGCCGAAGCCAACACCAGTGGACTTTCAAGAGCAATGGTGAAAGAAAGATTCAAGACCTTCAATCAACAGTTTGACGAGCGGCATCAGAGGCAATCTCAATGGACTGTCCCTGATAGTGAGTTGAGAGAGTCTCTGAGGCTAGCTGTTGCTGAAGTTCTTTTGCCCGCTTATAGATCTTTCGTCAAACGTTTCGGGCCTATGATTGAAAATGGGAAGAATCCTCAGAAGTACATCAAGTATGCTCCGGAGAGTCTGGAGAGCATGTTGAGTGAATTCTTTGAGGGAAAGACGTGGGGTGAACAAAAGCGTTGA 1887 43.51 MGVPHAMELLRERASFVRDSLHKSQTITDNMVSILGSFDYRLSALETAVRPTQIRTHSIRRAHENIDRTLKASEVILAQFDLSRKAEAKILRGPHEDLESYLEAIDQLRSIVQFFTGTKKYKGCEGVLNHTNNLLSKAISKLEEEFRQLLTIYSKPMEPDLLFDCLPQSLRPASETSNQQGDANGKVHKKSLEHTTYTTPNLIPSRVLPLLHDLTQQMVLAGHQQQVFRIYRDIRASVLEQSLRKLGVERLSKDDVQKMQWEALEAKIGNWIHYMRIAVKLLFAGEKKICDQIFVGVESLKDQCFAEVTANSISVLLSFGEAIAKSKRSPEKLFVLLDMFEIMRELQTEIEQLFGGKACSEMKESAFNLTKRLAQTAQETFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQSILKQLFQDFEEGDPESHLASITTRIMAALQNNLDGKSKLYKDSALTQLFLMNNIHYIVKSVRRSEAKDLLGDDWVQIHRRIVQQHANQYKRISWAKILQCVTVQAEANTSGLSRAMVKERFKTFNQQFDERHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGPMIENGKNPQKYIKYAPESLESMLSEFFEGKTWGEQKR 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8061899 8065099 + Conep19aG0115700.1 Cone19ag1123 459560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1123 628 Gene3D Exocyst complex component Exo70 74 628 - -
Cone19ag1123 628 PANTHER EXOCYST COMPLEX PROTEIN EXO70 13 621 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cone19ag1123 628 Pfam Exo70 exocyst complex subunit C-terminal 270 616 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cone19ag1123 628 Pfam Exocyst complex component Exo70 N-terminal 69 151 - -
Cone19ag1123 628 SUPERFAMILY Cullin repeat-like 76 619 IPR016159 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1082 Cone-Chr17:8069916 Cone19ag1123 Cone-Chr19:8061899 5.11E-73 dispersed
Cone19ag1123 Cone-Chr19:8061899 Cone1ag1422 Cone-Chr1:56849045 0 dispersed
Cone13ag1144 Cone-Chr13:9041662 Cone19ag1123 Cone-Chr19:8061899 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1123 K07195 - mdm:103421756 1016.53