Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1173 ATGGCGGAAAAGCACAGATGCGAAGCTCCAGAGGGCCACCTCCTTTGCGCGAATAACTGCGGCTTCTTTGGCAGTCCAGCCACCATGAACCTCTGCTCCAAATGTTATGGAGACTTTCGCCTCAAGGAGCAGCAAGAAGCCTCCACCAAATCCACCATAGAAGCTGCTCTCTCCGCTTCGTCACCGTCGCAGATTGAACCCCTCTCTGCTCCTCATCCTCCTCCCCTTCCTCTTCCGCCGATCACCTTGCCAGAGGAAGCTGAAGATTTTAGAAGTCCAGGTCTCATAACCGATGTTTCGGAGCCACAGGCGGTAGCGAACAAGACGAATCGTTGCACGGTGTGCCGGAAACGTGTCGGGCTGACCGGTTTTAGGTGTAAATGTGGGACCACGTTCTGCGGGGCTCACCGATATCCGGAGAAGCATGGATGTACGTTTGATTTCAAGACGGTTGGAAGAGATCAGATTGCTCGGGCTAATCCTCTCGTTAAAGCCGATAAGTTAGAGAAGATTTGA 516 52.91 MAEKHRCEAPEGHLLCANNCGFFGSPATMNLCSKCYGDFRLKEQQEASTKSTIEAALSASSPSQIEPLSAPHPPPLPLPPITLPEEAEDFRSPGLITDVSEPQAVANKTNRCTVCRKRVGLTGFRCKCGTTFCGAHRYPEKHGCTFDFKTVGRDQIARANPLVKADKLEKI 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8258367 8259830 - Conep19aG0120800.1 Cone19ag1173 459610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1173 171 Gene3D - 1 63 - -
Cone19ag1173 171 PANTHER AN1-TYPE ZINC FINGER PROTEIN 11 171 IPR050652 -
Cone19ag1173 171 SUPERFAMILY AN1-like Zinc finger 101 166 IPR035896 -
Cone19ag1173 171 MobiDBLite consensus disorder prediction 58 77 - -
Cone19ag1173 171 ProSiteProfiles Zinc finger AN1-type profile. 106 152 IPR000058 GO:0008270(InterPro)
Cone19ag1173 171 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 59 - -
Cone19ag1173 171 FunFam Zinc finger AN1-type containing 6 86 167 - -
Cone19ag1173 171 SMART A20_3 13 37 IPR002653 GO:0003677(InterPro)|GO:0008270(InterPro)
Cone19ag1173 171 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677(InterPro)|GO:0008270(InterPro)
Cone19ag1173 171 Pfam AN1-like Zinc finger 112 148 IPR000058 GO:0008270(InterPro)
Cone19ag1173 171 Gene3D - 94 167 IPR035896 -
Cone19ag1173 171 SMART AN1_Zf_4 112 149 IPR000058 GO:0008270(InterPro)
Cone19ag1173 171 Pfam A20-like zinc finger 14 36 IPR002653 GO:0003677(InterPro)|GO:0008270(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1173 Cone-Chr19:8258367 Cone20ag1076 Cone-Chr20:7492457 2.57E-41 dispersed
Cone10ag0164 Cone-Chr10:815531 Cone19ag1173 Cone-Chr19:8258367 1.22E-70 wgd
Cone11ag1378 Cone-Chr11:9999942 Cone19ag1173 Cone-Chr19:8258367 5.69E-20 wgd
Cone13ag1190 Cone-Chr13:9240133 Cone19ag1173 Cone-Chr19:8258367 4.81E-101 wgd
Cone18ag0208 Cone-Chr18:1024337 Cone19ag1173 Cone-Chr19:8258367 2.55E-54 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1173 - - - 0.0