Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone19ag1179 | ATGGAGTCGGAAGCTTCATGGCAGGTCAAGTATAACTTTCACGGTCTGTTTGTTTGCTTCTTCCTCATGTTCTCTTTCTTTTACCTCTTGCTTAGGTACTTAGACAAACCAAAACTTTATTGTAACTGTGAGATTTGTCAAACTTATCTCAAATCAAGTTGGTCGGAGAATTTCGATAATCTTTGCGATTGGTACGCCTTTCTTCTCAGAAAATCACCTACTAAAACCATCCACATACATGTTCTTGGCAACGTTATTACGGCAAATCAAAACAACGTTGAATACATCCTCAAGACAAGATTTGAGAATTACCCAAAAGGCAAACCCTTCTCCATGGTCCTTGGAAATTTTCTGGGTCGAGGTATCTTCAACGTCGATGGAGATTTATGGAGGTTTCAGAAACACATGGCTAGTCAAGAGCTTACGAAATACTCCTTGAGGTCTTATGCCTTCGAGATTTTCACTGAAGAAATTAAGCATCAACTTGTCCCTTTTTTGGCAAAGAAAGAGAATATTGGAGTGTTTTTGGATTTACAAGATGTGTTTAGAAGCTTCTCTTTCGATTGTATGTGCAAGTTTTTATTCGGGTTGGACCTGAGGTCTTTAGGCTTTTCGGTCCAAATATCGAAGTTCTCGGCAGCGTTCGATCTAGCGTCGAAGCTGTCGGCTGAGAGAGCCATGTCAGTTTCTCCGATGGTTTGGAAGGTCAAAAGGATGTTAGGTTTAGGGAGTGAAAAGCAATTGAAAGATGCAATCAGCTTGATTGATATCTTCGCTAGAGAGATCATAAGGAATAAACAAACAATAGGGTTTTCAAATCATAAGGATCTTCTCTCAAGATTCATGAGTACGATCAATGATGAAAAATATTTGAGGGATATTATCATAAGCTTCTTATTGGCCGGACGGGACACGGTGGCTTCCGCCTTGACAAGCTTCTTTTGGCTACTTTCAAACCACCCTCATGTCGAGGAAGCAATTCTACGCGAAGCCGATCGAGTTATCGGAAATGAAAAAAATGTCCTTACAAACTTTGAACAACTCAGTGAACTTCATTACTTACAAGCATCGATGTATGAAAGTATGAGACTCTACCCTCCGATTCAATTCGATTCAAAGTTTTGTGAGGAAGATGATGTTTTGCAAGACGGAACGTTCGTGAAGAGCGGAACTAGGGTTACTTACCACCAATATGCAATGGGTCGGATTGAAGAGATCTGGGGTCCAGATTGTTTAGAATTCAAGCCTGAAAGATGGTTACGAGATGGAATCTTCTTTTCAGAGAATCCATACAAATATCCGGTTTTTCAAGCCGGCCATAGGATTTGTTTGGGAAAAGAAATAGCTCTGGTCGAACTTAAATGCGTCGCTCTTACGCTTATCCGACGATTCCGTATCGAATTAGAGACAAAATGTTATAGACCCCGGTTTTCTCCCGGTCTTACCGCCACTTTTAGTGGCGGCTTACTGGTCTCAGTACGACAAAGAGAAACCCCCTCGTAG | 1503 | 41.12 | MESEASWQVKYNFHGLFVCFFLMFSFFYLLLRYLDKPKLYCNCEICQTYLKSSWSENFDNLCDWYAFLLRKSPTKTIHIHVLGNVITANQNNVEYILKTRFENYPKGKPFSMVLGNFLGRGIFNVDGDLWRFQKHMASQELTKYSLRSYAFEIFTEEIKHQLVPFLAKKENIGVFLDLQDVFRSFSFDCMCKFLFGLDLRSLGFSVQISKFSAAFDLASKLSAERAMSVSPMVWKVKRMLGLGSEKQLKDAISLIDIFAREIIRNKQTIGFSNHKDLLSRFMSTINDEKYLRDIIISFLLAGRDTVASALTSFFWLLSNHPHVEEAILREADRVIGNEKNVLTNFEQLSELHYLQASMYESMRLYPPIQFDSKFCEEDDVLQDGTFVKSGTRVTYHQYAMGRIEEIWGPDCLEFKPERWLRDGIFFSENPYKYPVFQAGHRICLGKEIALVELKCVALTLIRRFRIELETKCYRPRFSPGLTATFSGGLLVSVRQRETPS | 500 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 19 | 8279317 | 8280862 | + | Conep19aG0121400.1 | Cone19ag1179 | 459616 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone19ag1179 | 500 | Gene3D | Cytochrome P450 | 50 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag1179 | 500 | PANTHER | CYTOCHROME P450 | 40 | 488 | - | - | |
| Cone19ag1179 | 500 | Pfam | Cytochrome P450 | 84 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag1179 | 500 | CDD | CYP86A | 79 | 489 | - | - | |
| Cone19ag1179 | 500 | PRINTS | E-class P450 group I signature | 290 | 307 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag1179 | 500 | PRINTS | E-class P450 group I signature | 433 | 443 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag1179 | 500 | PRINTS | E-class P450 group I signature | 443 | 466 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag1179 | 500 | PRINTS | E-class P450 group I signature | 310 | 336 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag1179 | 500 | SUPERFAMILY | Cytochrome P450 | 59 | 496 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag1179 | 500 | PRINTS | P450 superfamily signature | 301 | 318 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag1179 | 500 | PRINTS | P450 superfamily signature | 356 | 367 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag1179 | 500 | PRINTS | P450 superfamily signature | 434 | 443 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag1179 | 500 | PRINTS | P450 superfamily signature | 443 | 454 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone19ag1179 | Cone-Chr19:8279317 | Cone2ag0970 | Cone-Chr2:35224812 | 2.61E-131 | dispersed | |
| Cone11ag1370 | Cone-Chr11:9950948 | Cone19ag1179 | Cone-Chr19:8279317 | 1.17E-212 | wgd | |
| Cone13ag1195 | Cone-Chr13:9264743 | Cone19ag1179 | Cone-Chr19:8279317 | 0 | wgd | |
| Cone18ag0213 | Cone-Chr18:1052733 | Cone19ag1179 | Cone-Chr19:8279317 | 3.77E-216 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone19ag1179 | K20624 | - | rcu:8273735 | 683.715 |