Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone19ag1198 | ATGGAAATACCTGGCCCAAGATCGAACTACACGCTTCTAAGTCAGATTCCAGACGATCCGTTAGGCGGTGGAGTAGCAATTCAAGGAACGGGAGCTGCAACGTGTTACGAGTCATTGTCCGGGGAAGGAAAGAATAGTAAGGGAAAGGCGGAGAAAGGACTCGACTGGGAAGCTGGAGCTGATCACAAGGCAAATCAGCTCGGAAATCGGCTAGGAAACATGTACTCTTCGCTTCAGAGGCAATCGAGTGGAAGCAGCTTCGGCGAGAGCTCGCTTTCTGGTGAGTACTACGCGCCGACGCTGTCTACTGGTACGGTAAACGAGACCGATGCTTTTCCGTATGTGCATGACGATGGATTCAGAACCGGAGGTGAGTTGAGGGCTAAGGTGGTGGAGGGATTTATGGGAACAGGTGGATCGTCAGGGAAGAGTTGGGCGCAGCAAATGGAGGAGTGTTATCATTTGCAGTTAGCTTTAGCGCTTAGGCTTTCATCGGTGGCAACGTGTGCTGATGATCCTAATTTTTTGGATCCAGTGGCCGATGAGTCTTCCCTGAGGTCCTCTTCTAGCTCAGTTGAAGCAGTCTCACATCGATTTTGGGTGAATGGCTGCCTATCATACTCTGATAAAGTTCCGGATGGATTTTATCTGATTCATGGGTTGGATCCGTATGTATGGACTGTGTGCACTGATCGGCACGAGAATGATCGGATCCCGTCGATTGAATTACTAAAGTCTGTTGATCCTAGCATGGATTCTTCCATCGAATCTGTTTTTATTGATCGACATAGTGATTCCAACTTAAAGGAACTCCAAAATCGAGTTCACAGCATTTCTCGTGGCTGTATAACCATTGAAGAGGTTGTAGATCAGCTTGCAAAGCTTGTATGCAACCGCATGGGTGGCTCTGTTTCCAATGGAGAAGATGATTTAGCATCCATCTGGAGGGAATGCTGCGATGACCTAAAATATTGCTTAGGATCTGTTGTTGTTCCAATTGGAAGCCTATCTATTGGCCTATGCAGACATCGTGCCCTATTATTTAAAGTACTGGCTGACACAATTGATTTACCTTGTCGAATAGCGAAAGGTTGCAAGTATTGCACAAGAGATGATGCTTCTTCATGTCTTGTCCATTTCGGACTCGGCAGGGAGTACCTTGTGGATTTGATCGGAAATCCAGGTTGCCTCTGTGAACCTGATTCCTTACTCAATGGTCCGTCATCCATCTCAATCTCTTCGCCTTTGCGCTTTCCACGACTCAATACAGTTGAGCCGATTATTGACTTCAGGTCACTGGCCAAACAGTACTTCTCAGAATGTCAATCACTTAACATTGTATTTGATGAAGCTCCCGCAGGGAATGTATTTGTTGGAGAAGATGGTGTTGTTAAGAAGACCACTGAGAGTAATGACTTAATGCTTGTGTCGGGTGACGGTGATGAAAATTTTCGGTTACTGCACCCAAAAGCCTCTCATTCCAGTGCTAATGATAGCAATTCCCTGCCCCTTATGTCATTTGACGCTTCCCATAATCTTACACCCTCAGCTCCCATTGGAAAAGATTCAGTTCCCTTGAACCATTTCCCACAGATCACTCATAGAGTTCCACCACCTCGGACATTGTCTCATATTAGAGTGGATCCTGCTAGGGATTCGGGGTTTGTGGATGGAGAAATATCTCTTGACATAGAGGACTTGACAATTCCATGGAATGATCTTGTTATAAAAGAGAGAATTGGATCAGGTTCTTTTGGAATCGTTCATCGTGCTGATTGGCATGGCTCAGATGTTGCTGTGAAGATTCTCATGGAACAAGACTTCTTTGCTGAACGATTTAAAGAATTTCTGCGGGAGGTTGCGATAATGAAACGCCTACGGCATCCCAACATAGTTCTATTTATGGGGGCAGTCACTCGGCCCCCAAATTTGTCTATAGTAACAGAATATCTTTCAAGAGGTAGCTTATATATGCTTTTGCATAAACCAGGCGCCAAAGAGATGTTAGACGAGAAGCGTCGTTTAAATATGGCTTATGATGTGGCAAAAGGAATGAATTATCTTCATAGACGCAATCCTCCAATTGTTCATCGTGATTTAAAATCTCCAAACCTTTTGGTTGACAAAAAGTACACGGTGAAGGTTTGTGATTTTGGTCTCTCTCGCTTAAAGGCGAATACATTTCTTTCATCGAAGTCAGCAGCTGGGACTCCTGAATGGATGGCTCCAGAAGTTCTTTGTGATGAGCCATCTAATGAAAAGTCGGATGTTTACAGCTTTGGCGTAATTTTGTGGGAGCTTGCAACGCTGCAAAAGCCATGGGGTAATTTAAATCCAGCACAGGTTATCAATGCTGTTGGAATTATGTGCAAGAGACTTGAGATTCCGCGGGATTTGAATCCTAGAGTAGCTTCCTTAATAGAGGCTTGCTGGGCCAAGGAGCTGTGGAAACGCCCATCCTTTTCGAGTATAATGGAATCCTTGAGACCATTGATTAAACCCGGTACACCTCAACCGGGCAGTGAGGATTTGTCGTTAATTATGCTGTGA | 2550 | 44.94 | MEIPGPRSNYTLLSQIPDDPLGGGVAIQGTGAATCYESLSGEGKNSKGKAEKGLDWEAGADHKANQLGNRLGNMYSSLQRQSSGSSFGESSLSGEYYAPTLSTGTVNETDAFPYVHDDGFRTGGELRAKVVEGFMGTGGSSGKSWAQQMEECYHLQLALALRLSSVATCADDPNFLDPVADESSLRSSSSSVEAVSHRFWVNGCLSYSDKVPDGFYLIHGLDPYVWTVCTDRHENDRIPSIELLKSVDPSMDSSIESVFIDRHSDSNLKELQNRVHSISRGCITIEEVVDQLAKLVCNRMGGSVSNGEDDLASIWRECCDDLKYCLGSVVVPIGSLSIGLCRHRALLFKVLADTIDLPCRIAKGCKYCTRDDASSCLVHFGLGREYLVDLIGNPGCLCEPDSLLNGPSSISISSPLRFPRLNTVEPIIDFRSLAKQYFSECQSLNIVFDEAPAGNVFVGEDGVVKKTTESNDLMLVSGDGDENFRLLHPKASHSSANDSNSLPLMSFDASHNLTPSAPIGKDSVPLNHFPQITHRVPPPRTLSHIRVDPARDSGFVDGEISLDIEDLTIPWNDLVIKERIGSGSFGIVHRADWHGSDVAVKILMEQDFFAERFKEFLREVAIMKRLRHPNIVLFMGAVTRPPNLSIVTEYLSRGSLYMLLHKPGAKEMLDEKRRLNMAYDVAKGMNYLHRRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLCDEPSNEKSDVYSFGVILWELATLQKPWGNLNPAQVINAVGIMCKRLEIPRDLNPRVASLIEACWAKELWKRPSFSSIMESLRPLIKPGTPQPGSEDLSLIML | 849 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 8377949 | 8383186 | - | Conep19aG0123300.1 | Cone19ag1198 | 459635 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone19ag1198 | 849 | FunFam | Serine/threonine-protein kinase CTR1 | 653 | 838 | - | - | |
Cone19ag1198 | 849 | FunFam | Serine/threonine-protein kinase isoform 1 | 565 | 652 | - | - | |
Cone19ag1198 | 849 | CDD | STKc_MAP3K-like | 580 | 828 | - | - | |
Cone19ag1198 | 849 | ProSiteProfiles | Protein kinase domain profile. | 574 | 832 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone19ag1198 | 849 | PRINTS | Tyrosine kinase catalytic domain signature | 755 | 777 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag1198 | 849 | PRINTS | Tyrosine kinase catalytic domain signature | 648 | 661 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag1198 | 849 | PRINTS | Tyrosine kinase catalytic domain signature | 736 | 746 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag1198 | 849 | PRINTS | Tyrosine kinase catalytic domain signature | 689 | 707 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag1198 | 849 | PRINTS | Tyrosine kinase catalytic domain signature | 799 | 821 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag1198 | 849 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 96 | 830 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cone19ag1198 | 849 | SUPERFAMILY | Protein kinase-like (PK-like) | 552 | 828 | IPR011009 | - | |
Cone19ag1198 | 849 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 695 | 707 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag1198 | 849 | Gene3D | Transferase(Phosphotransferase) domain 1 | 653 | 838 | - | - | |
Cone19ag1198 | 849 | ProSitePatterns | Protein kinases ATP-binding region signature. | 580 | 601 | IPR017441 | GO:0005524(InterPro) | |
Cone19ag1198 | 849 | SMART | serkin_6 | 574 | 832 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone19ag1198 | 849 | Pfam | Protein tyrosine and serine/threonine kinase | 575 | 828 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag1198 | 849 | Gene3D | Phosphorylase Kinase; domain 1 | 567 | 652 | - | - | |
Cone19ag1198 | 849 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 192 | 398 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone19ag1198 | Cone-Chr19:8377949 | Cone7ag0865 | Cone-Chr7:6610121 | 6.02E-195 | dispersed | |
Cone10ag0186 | Cone-Chr10:905888 | Cone19ag1198 | Cone-Chr19:8377949 | 0 | wgd | |
Cone13ag1213 | Cone-Chr13:9357152 | Cone19ag1198 | Cone-Chr19:8377949 | 0 | wgd | |
Cone19ag1198 | Cone-Chr19:8377949 | Cone3ag0203 | Cone-Chr3:1052705 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82411 | PF01501 | Glyco_transf_8 | 3.20E-43 | CL0110 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone19ag1198 | K14510 | - | mdm:103449391 | 1147.5 |