Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1206 ATGATGAAGAACAAGAAGAAGAATCATCCATTCCCTTCTTCTCTCACTTACATTCCCTTCTTTCTTCTCTCTTTCATCTCTGCTCTCTTTCCGTCTTCTTCTTCTCTCTCATCTCCTCCAAACGACACCGCGGCTCTCACTCACTTCCGCCTCCACTCCGATTTACATGGAAACCTCCTGTCCAACTGGACCGGCTCCGATGCCTGCTCTCACTCATGGTATGGAGTTGGCTGCTCTTCTGATAGCCGCGTCATCGCTCTCTCACTCCCTTCCTCCTATCTCAGGGGACCGATTTCCTCTCTCTCTTCTCTTGATCAGCTGCGCAGACTCGACCTCCGTGACAACCGCTTAAACGGCTCCATCTCTCCCCTCACAAACTGTACAAACCTCAAACTGTTTTACCTCGCCGGAAACGAGTTCTCAGGCGAAATTCCGTCCAGAATATCCTCACTCAGGCGCCTCCTCCGGCTTGACCTCTCCAACAACAACATCCACGGCGAAATCCCTAACGAGTTGTCCCGGTTAACTCGGTTACTCACTCTTCGGTTGCAGAACAATGTGATTTCCGGATTAATTCCAGATCTCTCTGTTTCGCTTGTTAATCTCAGGGAGCTGAATTTAACCAACAACGAGCTGTACGGAAAGTTACCAGAAGGTTTATTAAAAAAATTTGGGGAAAAAAGCTTTACAGGGAATGAAGGACTATGTGGATCGAATCCATTACCGAATTGTTCATATACAGGGAGTATTCCATCTCCGACTGGATCATCATCGTCTTCTTCTTCTTCTCCTCAGAGTGTCGTTCCATCAAACCCTAGCTCGTTGCCAAAATCCCCCATCATCGGACAATTAAGCAACAAACAATCTCGTAAAACGCTAAGTAGAGGAGCTATAGTAGCTATCGTAGTCGCAAATTGTGTAGCGCTGCTAGTGATCGTTTCTTTCATGATAGCGTACTACTGTGCGCGAGATCGTAGCTCGAGCTCTTCAATGGGAGCAGAAAGCGAGAGAGGGAAGAGAAGATCGAGTGTGAGTAGCTATGGCGGCGGAGAAAAGAAGTTTTATGCAAATGGAGGCGGAGAAAATGACGGGACGGAGAAAGGCAAGCTGGTTTTCATGGATTGGAAGAAGCAATTTGAGCTGGAGGATCTGCTGCGAGCCTCGGCGGAGATGCTGGGGAAGGGAAGCTTAGGGACGGTGTATAGGGCGGTTCTTGACGACGGTTGCACGGTGGCGGTGAAACGGTTGAAAGATGCGAATCCATGTTCGAGGAAGGAGTTTGAAGGATATATGGATGTGATTGGAAAGATGAAACATGCAAATGTTGTGAGATTAAGAGCTTATTATTACGCAAAAGAGGAAAAGCTTCTTGTGTACGATTATCTTCCTAATGGCAGCTTGCATTCTCTTCTTCATGGTAATCGTGGGCCGGGAAGGATTCCATTGGACTGGACTACAAGGATCAGCCTGGTTCTAGGAGCAGCTCGTGGGCTTGCTCGAATCCATGAAGAACATAGCACGTCCAAAATCCCTCATGGAAACATAAAATCTTCAAACGTGCTTCTGGACAAAAACGGCGTCGCCTGCATTTCGGATTTCGGGTTGTCTCTACTTCTCAACCCGGTCCATGCGATCGCCAGATTGGGAGGATACAAAGCTCCAGAACAAGCAGAAGTCAAGAGGCTTTCTCAGAAGGCAGATGTTTACAGTTTTGGTGTCTTGTTATTGGAAGTACTGACAGGCAGGGTTCCTTCGCAGTATCCTTCACCATCTCGTCCGCCAATGATTGAGGAGGAATTGGTCGTGGACCTTCCAAAGTGGGTCCGGTCAGTGGTCAGGGAAGAGTGGACTGCTGAGGTGTTCGATCAAGAGCTTTTAAGGTACAAGAACATTGAGGAGGAGCTCGTGGCTATGCTTCATGTCGGGTTAGCTTGTGTTCTGCCACAGCCTGATAAGAGACCTACTATGGTTGAAGTTGCTAAGATGATTCAGGATATTGGAGTTGAACAGTCACCTCTTGGAGATGACTATGATGAGTCGCGTAACTCAGTGTCACCTTCTCTTGTCACCACCGAAGATGGTCCGGTTTGA 2091 47.87 MMKNKKKNHPFPSSLTYIPFFLLSFISALFPSSSSLSSPPNDTAALTHFRLHSDLHGNLLSNWTGSDACSHSWYGVGCSSDSRVIALSLPSSYLRGPISSLSSLDQLRRLDLRDNRLNGSISPLTNCTNLKLFYLAGNEFSGEIPSRISSLRRLLRLDLSNNNIHGEIPNELSRLTRLLTLRLQNNVISGLIPDLSVSLVNLRELNLTNNELYGKLPEGLLKKFGEKSFTGNEGLCGSNPLPNCSYTGSIPSPTGSSSSSSSSPQSVVPSNPSSLPKSPIIGQLSNKQSRKTLSRGAIVAIVVANCVALLVIVSFMIAYYCARDRSSSSSMGAESERGKRRSSVSSYGGGEKKFYANGGGENDGTEKGKLVFMDWKKQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCSRKEFEGYMDVIGKMKHANVVRLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHEEHSTSKIPHGNIKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRVPSQYPSPSRPPMIEEELVVDLPKWVRSVVREEWTAEVFDQELLRYKNIEEELVAMLHVGLACVLPQPDKRPTMVEVAKMIQDIGVEQSPLGDDYDESRNSVSPSLVTTEDGPV 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8418148 8420844 + Conep19aG0124100.1 Cone19ag1206 459643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1206 696 PANTHER OS05G0588300 PROTEIN 25 671 IPR050994 -
Cone19ag1206 696 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 462 674 - -
Cone19ag1206 696 ProSiteProfiles Protein kinase domain profile. 386 668 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1206 696 MobiDBLite consensus disorder prediction 670 696 - -
Cone19ag1206 696 MobiDBLite consensus disorder prediction 247 282 - -
Cone19ag1206 696 FunFam pollen receptor-like kinase 1 356 461 - -
Cone19ag1206 696 Gene3D Transferase(Phosphotransferase) domain 1 462 683 - -
Cone19ag1206 696 Gene3D Ribonuclease Inhibitor 127 246 IPR032675 -
Cone19ag1206 696 SUPERFAMILY L domain-like 40 221 - -
Cone19ag1206 696 SUPERFAMILY Protein kinase-like (PK-like) 390 663 IPR011009 -
Cone19ag1206 696 SMART LRR_typ_2 199 223 IPR003591 -
Cone19ag1206 696 SMART LRR_typ_2 104 128 IPR003591 -
Cone19ag1206 696 SMART LRR_typ_2 151 175 IPR003591 -
Cone19ag1206 696 FunFam Nuclear pore complex protein NUP107 40 194 - -
Cone19ag1206 696 CDD STKc_IRAK 392 666 - -
Cone19ag1206 696 Pfam Protein tyrosine and serine/threonine kinase 390 661 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1206 696 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Cone19ag1206 696 Gene3D Ribonuclease Inhibitor 36 126 IPR032675 -
Cone19ag1206 696 Gene3D Phosphorylase Kinase; domain 1 361 461 - -
Cone19ag1206 696 ProSiteProfiles Leucine-rich repeat profile. 106 128 IPR001611 GO:0005515(InterPro)
Cone19ag1206 696 Pfam Leucine Rich Repeat 154 175 IPR001611 GO:0005515(InterPro)
Cone19ag1206 696 Pfam Leucine Rich Repeat 201 220 IPR001611 GO:0005515(InterPro)
Cone19ag1206 696 Pfam Leucine Rich Repeat 106 123 IPR001611 GO:0005515(InterPro)
Cone19ag1206 696 Pfam Leucine Rich Repeat 129 151 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0812 Cone-Chr13:7457178 Cone19ag1206 Cone-Chr19:8418148 3.98E-124 dispersed
Cone19ag0818 Cone-Chr19:6511086 Cone19ag1206 Cone-Chr19:8418148 3.37E-124 dispersed
Cone19ag1206 Cone-Chr19:8418148 Cone3ag0198 Cone-Chr3:1023787 1.35E-243 dispersed
Cone10ag0190 Cone-Chr10:933889 Cone19ag1206 Cone-Chr19:8418148 7.11E-242 wgd
Cone19ag1206 Cone-Chr19:8418148 Cone2ag0144 Cone-Chr2:760315 1.77E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82412 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1206 - - - 0.0