Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1207 ATGGCTTCCTGTGACGACGATTTCTCTCTCCTCAGCGACGACCACCACCATCAATCTCACCCTAATCACCACCACATACCTTCAACTCACCAACTCCACCCACCGTATACGCCTCATCGCTTCGCTTCCAGACCGAATTCGGTCCACACGCCCCCACCGCCACCACCACCACCACCACCACCGATCCTAGCCCCGTCCGGAAGTCCTAAGAAGATCTGCGCCGGTGGAGAAGAAGGGGAAGAGGACGACGGAGAAGACTATGGCGATGCTGCCTTCTGCTCAAACCCATATGACAATGGAACAGATCAGAGTGGGGTCGGGGCCGATGTCGACGTACGGAGCGAGAAGAGAAAGGATCATTCAAATCAGCTCGTCGAGGAAGGGGATCCGTACAGTTATAAGAAACAGAAACCTTCGGGAAGTGGTGGTGAGTACAGGAAGGATCGGGAAGAGTGGAGCGATGCGGCGATCGCGTGCCTTCTCGATGCTTACACTGATAAGTTTACACAGCTGAACAGAGGGAACCTGAGAGGGAGAGATTGGGAAGAGGTGGCAGCTACAGTGAGCGAGCGATGTGAGAAGCAGGGTAAGAGCGTGGAGCAGTGTAAGAACAAGGTGGACAACTTGAAGAAGAGGTATAAGCTGGAACGGCATAGGATGATAAATGGTGGCGTTTCGGCCAGCCACTGGCCTTGGTTCAAGCAGATGGAGCAGATTGTTGGAAATTCTTTGACGATGAAGGTCTCTTCTGATGAGCATCGCAGTGTTTGTTCTTCAGGGAACACACCAAGACCATCTAAAAGATATGTGGTACCAACGCCAAATACTGCCGGTGAGATGAATAACCTGAAACCCAAATCGACATCTAACCCAAGATGGCAAAGAGTAGTCTTCAAAATCAGTGGTGCCGCACTTGCTGGGACTGTTCCTAACAACATTGACTCAAAGGTGGCAATGCTGATTGCTAGAGAAGTTGCAACGGCTTGTCGGCTTGGTGTGGAGGTAGCAATTGTTGTTGGAGGCCGGAACTTCTTTTGCGGAGATACATGGGTGACTTCAACAGGTTTAGATAGATGTACTGCTTACCAAATTGGTATGATGGCTACTGTGATGAACTCTATGCTACTCCAGTCAGTATTAGAGAAGATGGGAGTTCAGACTCGAGTCCAATCTGCATATGCACTGCAGGACATTGCTGAACCGTACAGTAGGCAACGTGCTATACGTCATCTTGAGAAAGGCAGAGTTGTTATATTTGGTGGAGTAGGTGTTGGCACTGGAAATCCTCTCTTTTCCACCGATACTGCCGCAGCACTTCGAGCTTCAGAGATACATGCTGAGGCAGTTCTGAAAGGTGCCAATGTTGATGGTGTGTATGATTGCAATTCCCAAGACAACAATTTTACATTCAAGCACATCTCCTTCAGGGAGTTAGTCTCCAGAGGTGCCACTGCCATGGACATGACAGCATTGACTTTCTGTGAGGAAAATAATCTTCCGGTTGTTGTTTTTAATCTTCTTGAGCCTGGAAACATCTCAAAAGCGCTATGTGGAGATCAAATCGGTACATTAATTGATCAAACTGGAAGACCTAACTAG 1599 48.84 MASCDDDFSLLSDDHHHQSHPNHHHIPSTHQLHPPYTPHRFASRPNSVHTPPPPPPPPPPPILAPSGSPKKICAGGEEGEEDDGEDYGDAAFCSNPYDNGTDQSGVGADVDVRSEKRKDHSNQLVEEGDPYSYKKQKPSGSGGEYRKDREEWSDAAIACLLDAYTDKFTQLNRGNLRGRDWEEVAATVSERCEKQGKSVEQCKNKVDNLKKRYKLERHRMINGGVSASHWPWFKQMEQIVGNSLTMKVSSDEHRSVCSSGNTPRPSKRYVVPTPNTAGEMNNLKPKSTSNPRWQRVVFKISGAALAGTVPNNIDSKVAMLIAREVATACRLGVEVAIVVGGRNFFCGDTWVTSTGLDRCTAYQIGMMATVMNSMLLQSVLEKMGVQTRVQSAYALQDIAEPYSRQRAIRHLEKGRVVIFGGVGVGTGNPLFSTDTAAALRASEIHAEAVLKGANVDGVYDCNSQDNNFTFKHISFRELVSRGATAMDMTALTFCEENNLPVVVFNLLEPGNISKALCGDQIGTLIDQTGRPN 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8420935 8423602 - Conep19aG0124200.1 Cone19ag1207 459644
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1207 Cone-Chr19:8420935 Cone1ag1502 Cone-Chr1:57157435 2.22E-18 dispersed
Cone6ag1292 Cone-Chr6:10353034 Cone19ag1207 Cone-Chr19:8420935 1.32E-81 transposed
Cone13ag1220 Cone-Chr13:9395991 Cone19ag1207 Cone-Chr19:8420935 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45369 PF00395 SLH 0.00026 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1207 - - - 0.0