Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1210 ATGGAGGACAAGAAGTACGAGGAGGATCCGAGCGAGAGCAGTGACTACACGTCGGAAGACGAAGGAACGGAAGACTACCGTCGAGGAGGGTACCACGCGGTTCGAATCGGCGACACTTTTAAGAACAGTCGCTATGTCGTGCAGAGCAAGCTCGGTTGGGGCCATTTCTCCACCGTCTGGCTCGCCTGGGATTGTCAGACCTCAAAATATGTGGCCTTGAAAGTGCAAAAGAGTGCCCAGCACTACACTGAGGCAGCCATGGACGAGATCACCATCTTGCAACAGATTGCAGAGGGAGATCCAGAAGATAAAAAATGTGTGGTGAAGCTTTTGGATCATTTCAAGCATTCAGGTCCAAATGGGCAGCATGTTTGTATGGTTTTTGAATACCTAGGGGATAATCTCTTGACACTTATAAAGTACACTGATTACCATGGATTGCAGATTCATAGAGTTAAAGAGATATGTTATCATGTATTAGTTGGATTGGATTATTTGCACAAGCAGTTATCTATTATACACACTGATCTGAAGCCAGAAAATATTTTGCTACTCTCTATGATAGACCCATCAAAGGATCCTAGAGAGTCAGGTTCTCCTCTTATCCTTCCTAATAATAAGAATAAGGTTGGTTTAGTGTCAGGGGTTGCAAGAGAAATTAAAAAATTAAACGGTGATTTGACAAGTAACCAGAAGAAGATTAGAAGAAAAGCTAAGCAGGCTGCCAAGGATTTTTCCGGGAAGGAAGTTGCTGCCATGGAGTCTGAGGCAGACCCGCCGGAATCTTCTGATGCGGTAGAATCTTCTCCAAACTCAAAGTCAAATTGTGAGGACCAGCCAAGTAGTTCAGTCAATGTGATTGATGGCATAGAGAGTAATAAAAAAGGGAATCGCTCCAGGAGGAAGAAGCTGTTGATGTTGGCTGACCTGAAATGCAAACTGGTTGACTTTGGGAATGCATGTTGGACATATAAACAGTTTACGAATGATATTCAGACCAGACAGTATAGGTGTCCAGAAGTGATCCTTGGATCGAAGTATTCTACATCAGCAGATCTCTGGTCTTTTGCCTGCATTTGCTTTGAGCTTGTTACTGGCGACGTGCTCTTCGATCCTCATAGTGGCGATAACTTTGATAGGGATGAGGATCACTTGGCATTAATGATGGAGCTTCTCGGGATGATGCCGCGAAAGATTGCTTTAGGCGGTCGTTATTCTCGGGATTTCTTCAACAGGCATGGCGATTTGAGGCATATCCGTCGATTACGATTCTGGCCGTTGAACAAAGTTCTTGTAGAGAAGTATGAATTAAGCGAGCAAGATGCAAATGACATGGCTGAGTTTCTTATACCTATTCTTGATTTTGTCCCTGAGAAGCGGCCCTCCGCCGGTCAATGCCTTCTTCATCCATGGATTGATGCAGGCCCTCGTTTGTTAGAACCTTCCATTTCTTCCAAGGAAAACCAGTTTCATGAGGATGAGAGAAAGAAAAGGGAGAAGGATGAAAGAGAGACGGTAGAGGTCGGGATAGGAAATATTGCTATCAATGCGGATTCTTCAAAAACATTTAATACAACCACAAGCAGCTTATCTTGA 1596 43.98 MEDKKYEEDPSESSDYTSEDEGTEDYRRGGYHAVRIGDTFKNSRYVVQSKLGWGHFSTVWLAWDCQTSKYVALKVQKSAQHYTEAAMDEITILQQIAEGDPEDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYHGLQIHRVKEICYHVLVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRESGSPLILPNNKNKVGLVSGVAREIKKLNGDLTSNQKKIRRKAKQAAKDFSGKEVAAMESEADPPESSDAVESSPNSKSNCEDQPSSSVNVIDGIESNKKGNRSRRKKLLMLADLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELVTGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLVEKYELSEQDANDMAEFLIPILDFVPEKRPSAGQCLLHPWIDAGPRLLEPSISSKENQFHEDERKKREKDERETVEVGIGNIAINADSSKTFNTTTSSLS 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8435198 8437877 + Conep19aG0124500.1 Cone19ag1210 459647
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1210 Cone-Chr19:8435198 Cone8ag0903 Cone-Chr8:8773755 2.75E-159 dispersed
Cone1ag0509 Cone-Chr1:4999402 Cone19ag1210 Cone-Chr19:8435198 1.53E-203 wgd
Cone13ag1224 Cone-Chr13:9414241 Cone19ag1210 Cone-Chr19:8435198 0 wgd
Cone19ag1210 Cone-Chr19:8435198 Cone5ag1374 Cone-Chr5:8378468 1.45E-260 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82413 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1210 K08832 - vvi:100254468 830.861