Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1221 ATGGCGGACGACACCACAGAGAGCCGCAATAAAGCTCGATTAGCCATTTTAGAGCTCGCTAACATGATCAGCGTACCTATGTCCCTCAACGCAGTAGTCCGCCTCAACGTCGCCGACGCCATCTGGCAAGGGGGCTCGAACTCTCCTCTCTCCGCCTCTCAGATCCTCACTCGCATACTCCCCTCTGGCGCCGGCGACGCTGATAATCTCCAGCGCGTCCTCCGCATGCTCACCAGCTACGGCGTTTTCTCCGAGCACACGAACGAGATCTCCGGCGAGCGGAAATACTCCCTCACCGACATTGGCAAAACGCTCGTAACCGACTCCGACGGACTTTCGTACGGCGCGTACGTGTTACAGCACCACCAGGACGCGCTGATGAGAGCCTGGCCGCTGGTCCACGAGGCGGTGGTGGATCCGAGGACGGAGCCGTTCGTGAGGGCGAATGGAGAGGCGGCGTATGATTATTACGGGAAGAAGCCGGAGATGAACGATCTGATGCAGAGAGCTATGTCGGGAGTATCTGTGCCGTTCATGAAAGCTATATTGGACGGCTACGATGGATTCAAGGGAGTGAACAGATTAGTAGATGTGGGCGGGAGTGCAGGAGATTGCCTGAAGATGATATTACAGAAACACCACGATGTGAAGGAAGGAATCAATTTTGATCTCCCTGAGGTCGTTGCTAAGGCACCTACCATTCCGGGAGTGACGCACATTGGTGGGGACATGTTCACGTCAATTCCAACGGCTGACGCAATCTTCATGAAGTGGGTTTTGACGACGTGGACGGACGAAGAGTGTGAGGCGATAATGAGGAATTGCTACATGTCGTTGCCGGTGGGGGGAAAGCTGATAGCGTGTGAGCCGACATTGCCAGAGGAGTCGGACGGGAGTCGTAGGACGAGGGCGCTTCTAGAAGGGGATATATTTGTGATGACAATTTATAGGACTAAGGGGAAGCATAGGACTGAGCAGGAATTCAAGCAGCTTGGTGCTTCTGCTGGCTTTCCTAAATTCCGAGCCTTTTACATTGACTATTTCTATGCCGTTTTGGAATTTCAAAAGTGA 1071 53.59 MADDTTESRNKARLAILELANMISVPMSLNAVVRLNVADAIWQGGSNSPLSASQILTRILPSGAGDADNLQRVLRMLTSYGVFSEHTNEISGERKYSLTDIGKTLVTDSDGLSYGAYVLQHHQDALMRAWPLVHEAVVDPRTEPFVRANGEAAYDYYGKKPEMNDLMQRAMSGVSVPFMKAILDGYDGFKGVNRLVDVGGSAGDCLKMILQKHHDVKEGINFDLPEVVAKAPTIPGVTHIGGDMFTSIPTADAIFMKWVLTTWTDEECEAIMRNCYMSLPVGGKLIACEPTLPEESDGSRRTRALLEGDIFVMTIYRTKGKHRTEQEFKQLGASAGFPKFRAFYIDYFYAVLEFQK 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8477657 8479642 + Conep19aG0125600.1 Cone19ag1221 459658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1221 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 356 IPR016461 GO:0008168(InterPro)
Cone19ag1221 356 PANTHER O-METHYLTRANSFERASE 20 337 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Cone19ag1221 356 SUPERFAMILY Winged helix DNA-binding domain 8 108 IPR036390 -
Cone19ag1221 356 Pfam O-methyltransferase domain 133 337 IPR001077 GO:0008171(InterPro)
Cone19ag1221 356 Gene3D - 1 109 IPR036388 -
Cone19ag1221 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 354 IPR029063 -
Cone19ag1221 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168(InterPro)
Cone19ag1221 356 FunFam Caffeic acid 3-O-methyltransferase 111 356 - -
Cone19ag1221 356 Gene3D Vaccinia Virus protein VP39 110 356 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1221 Cone-Chr19:8477657 Cone1ag1025 Cone-Chr1:55137199 7.59E-74 dispersed
Cone19ag1221 Cone-Chr19:8477657 Cone5ag0732 Cone-Chr5:3154646 6.08E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1221 - - - 0.0