Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1256 ATGAAGTGCCACTTTCCGTTCTGCAGCTGCTTTTCTTCCTCTTCATCAAGCACAGCTGTGATCAACAGCGACCGTGGTAACATTCTAACATCACAATCTCTTTATGCTGGAAAAAGGCAAAACCAGGATAGTTTTCGTGCCTTCTCCTATAATGAACTTAAACATGCAACCCATGACTTCCATTCGTCAAATAAAGTTGGTGAAGGTGGATTTGGCTCTGTTTATAAGGGTCGACTTAAAGATGGAAGTATTGTAGCTGTGAAAGTGCTTTCAATTGAGCTAGAATCAATGAGGGGGGAGAGAGAATTTGTGGCTGAATTAGCTGCACTCTCGAATATCAAGCATGAAAACCTTGTCACCCTTAAAGGCTGTTGTGTTGATGGGGCTAATAGATATTTGGTTTATGATTACATGGAAAACAACAGCCTTTCACACACTCTCTTAGGAGCAAAGGAGAATAGGGCGAAGTTTAATTGGGAAGCTAGACGGGATATTTCGATAGGAGTAGCTTGTGGGATTACTTATCTTCATGAAGAAGTTGAGCCTCATATTGTACATAGAGATATAAAAGGTAGCAATATACTTCTTGATCAAAACCTTAGACCTAAGGTTGCGGATTTCGGGTTGTCTAAGCTTTTACGAGAAAACAGCTCCTATGTTAGCACCCGTGTGGCCGGTACATTAGGATATCTTGCTCCGGAATATGCCGTAAGTGGACGTCTTACGAGAAAATCGGATGTTTATGGCTTCGGAGTATTGCTGTTGGAGATTGTTAGTGGCCGAGCCGTCATTGATTTTAACGTGGAGCATGGTGAACACTACATTGTTGAAAAGGCGTGGGAAGCATTCAAGGATAACAACATTGCCCGGTTAGTGGACCCCATGCTCGGAAAGAAATTCCCCAAGGATGAAGCAGTTCGGTTTCTAAAAATAGGATTGCTTTGTGTTCAAGAAAACACAAAGCAGAGACCGCGAATGTCAACGGTACTTAAGATGTTGACTAATAAGAGCACGGTCAAAGATGATCAGATTTCTAAACCCGGGCTTGTTACTGATTTCATGGATATAAAATTGGGACAGAAGCATTCGACGCAGAGTGTATTATTTTCCAAGGCATCTGCTTGTGACAGTATGCAGAGCCTTAACGATAGTAAATCATTTTAA 1164 41.67 MKCHFPFCSCFSSSSSSTAVINSDRGNILTSQSLYAGKRQNQDSFRAFSYNELKHATHDFHSSNKVGEGGFGSVYKGRLKDGSIVAVKVLSIELESMRGEREFVAELAALSNIKHENLVTLKGCCVDGANRYLVYDYMENNSLSHTLLGAKENRAKFNWEARRDISIGVACGITYLHEEVEPHIVHRDIKGSNILLDQNLRPKVADFGLSKLLRENSSYVSTRVAGTLGYLAPEYAVSGRLTRKSDVYGFGVLLLEIVSGRAVIDFNVEHGEHYIVEKAWEAFKDNNIARLVDPMLGKKFPKDEAVRFLKIGLLCVQENTKQRPRMSTVLKMLTNKSTVKDDQISKPGLVTDFMDIKLGQKHSTQSVLFSKASACDSMQSLNDSKSF 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8610969 8612573 - Conep19aG0129100.1 Cone19ag1256 459693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1256 387 Gene3D Transferase(Phosphotransferase) domain 1 138 347 - -
Cone19ag1256 387 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 39 370 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cone19ag1256 387 SMART serkin_6 60 333 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1256 387 ProSiteProfiles Protein kinase domain profile. 60 339 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1256 387 Pfam Protein kinase domain 60 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1256 387 Gene3D Phosphorylase Kinase; domain 1 22 137 - -
Cone19ag1256 387 ProSitePatterns Protein kinases ATP-binding region signature. 66 88 IPR017441 GO:0005524(InterPro)
Cone19ag1256 387 FunFam Serine/threonine-protein kinase receptor 32 137 - -
Cone19ag1256 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1256 387 SUPERFAMILY Protein kinase-like (PK-like) 42 333 IPR011009 -
Cone19ag1256 387 CDD STKc_IRAK 66 335 - -
Cone19ag1256 387 FunFam Putative LRR receptor-like serine/threonine-protein kinase 138 345 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1256 Cone-Chr19:8610969 Cone9ag0212 Cone-Chr9:902408 3.38E-121 dispersed
Cone1ag1347 Cone-Chr1:56531822 Cone19ag1256 Cone-Chr19:8610969 8.38E-64 wgd
Cone1ag0478 Cone-Chr1:4613991 Cone19ag1256 Cone-Chr19:8610969 1.26E-20 wgd
Cone13ag1268 Cone-Chr13:9584144 Cone19ag1256 Cone-Chr19:8610969 1.63E-236 wgd
Cone19ag1256 Cone-Chr19:8610969 Cone5ag0334 Cone-Chr5:1416258 1.71E-143 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82415 PF00733 Asn_synthase 5.70E-06 CL0039 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1256 - - - 0.0