Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1265 ATGTTGAAACTTTCTTGTAATTTTCCTGGCATTGTCTTCTTCTTTATCGCCTCTGTATTACTGCCCTGCATTTTTAACACTAATATTACGGCGGGGGCGACTGAATTCGACTTCGGAACTTTGACTCTAAGCAGCCTGAAGCTCCTTGGAGACGCCCACTTAAACAATGGAAGCGTGAGGCTTACTCGCGACCTCGCTGTCCCCAATTCCGGCGCCGGAAGAGTCCTCTACACCAAACCCATAAGATTCCGAAAACCAGAGTCTCAGTTTCCGGCGTCCTTCTCCACCTTCTTCTCATTCTCCGTCACGAATTTGAACCCATCATCGATCGGTGGCGGACTTGCCTTCGTACTTTCTCCGGACGATGAGACGATCGGCGGCGCTGGTGGGTTTCTCGGACTCGCCGAAGACAAACCCACCGGCTCAGGTTTTCTAGCAGTAGAGTTCGATACTCTAATGGACGTCGAGTTCAAAGACATTAACGGAAATCACGTCGGATTGGATCTAAACAGCATGTTATCAACACAAGTAGGCGACTTAGAAACGATCGGAGTCGATCTGAAAAGCGGTGATACGGTGAACGCGTGGATCGAGTTTGACGGGTTGACTCAGTTGTTCAACATTTCCGTCTCGTACTCGAATCTGAAACCGAAAGATCCACTCTTATCCTTCCCTCTCGATCTAAATCAGTATGTGAGCGAGTTCATGTACGTGGGTTTTTCCGGGTCGACTCAGGGGAGTACAGAAATTCACAGTGTCGACTGGTGGAGTTTCAGTTCATTTTTCGAGTCAAACTCTCCACCTGGATCGTTGACTCCTCCGCCGCCGCCAACGGCTACTTTGATGAACCCAACGGCTAATTCCGTGAAATCTCCACCTCCTGAAGCATTACCGCCATCTGGGTCTAACTCAAATTCTGTTTCAGAGAAGAACGGTAGTAAGTCATCTTCGTCCTGTCATAACCAGCTTTGCAAACAGGGCCCCGGTGCCGTCGCCGGCGTAGTAACAGCCGGGGCTTTTGCTTTAGCAATATTCGCCGGAGCTCTGATCTGGGTCTATTCCAAAAAATTCAAAACTGTTAAGAAATCCGATTCACTTGCATCAGATGTTATCAAACAGCCTAAAGAGTTCAGCTACAAAGAGCTCAAAACCGCCACTAGATGCTTCAACACAAATAGAATCATAGGCCATGGTGCATTTGGGACTGTTTACAAAGGCATTTTAGAAGAAACAGGGGATATTGTTGCTGTAAAACGATGTAGTCACAGCACTCAAGGAAAGAACGAATTCTTATCCGAATTGTCAATAATCGGAACTCTAAGGCATAGGAATCTAGTCCGGCTTCAAGGTTGGTGTCACGAAAAAGGCGAAATCTTATTAGTTTATGATTTGATGCCCAATGGAAGTCTAGACAAAGCATTGTTTGAGGCTAGAATTCCATTACCATGGCCTCATAGGAAAAAAATCTTACTTGGTGTTGCTTCTGCTCTTGCTTATTTACATCAAGAATGTGAAAACCAAGTGATTCATAGAGATATCAAGACTAGTAACATTATGTTAGAGGAAGGGTACAATGCGAGATTAGGCGATTTCGGATTAGCCAGACAGGTTGAACATGACAAATCGCCTGACGCCACGGTGGCGGCTGGAACAATGGGGTACTTAGCCCCCGAGTATCTTTTAACAGGTCGGGCCTCGGACAAAACGGACGTGTTTAGTTATGGAGCTGTGGTACTAGAAGTTGCAAGTGGGAGAAGGCCCATCGAAAAAGAAGGTAATAATAATAACAACAATGGGGTGGTGGGGAAAAATGTGGGGACTAATAATAGCAATTTGGTGGATTGGGTATGGAGTCTACATAGAGAAGGTAGGTTGTTAATGGCGGCCGATTCAAGACTTGGGGGCGAGTTTGAGGAAGAAGAGATGATAAATGTGTTGCTGATTGGGCTGGCTTGTTCGAACCCGGACCCAATGATCCGCCCGACAATGAGGAATGTGGTTCAAATGCTTGTGGGTGAAGCTCAAGTGCCAATTGTGCCAAGGACTAAGCCTTCCACTAGTTTTAGTACCGCTCATCTTTTGCTTAGTTTGCAGGATAGTGTTTCTGACTTTAATGGATTGATCACCATCTCCCCCTCCTCGTCGGAACGGAGCTTCAATGGCGGCGAAACCGTTTAA 2178 46.42 MLKLSCNFPGIVFFFIASVLLPCIFNTNITAGATEFDFGTLTLSSLKLLGDAHLNNGSVRLTRDLAVPNSGAGRVLYTKPIRFRKPESQFPASFSTFFSFSVTNLNPSSIGGGLAFVLSPDDETIGGAGGFLGLAEDKPTGSGFLAVEFDTLMDVEFKDINGNHVGLDLNSMLSTQVGDLETIGVDLKSGDTVNAWIEFDGLTQLFNISVSYSNLKPKDPLLSFPLDLNQYVSEFMYVGFSGSTQGSTEIHSVDWWSFSSFFESNSPPGSLTPPPPPTATLMNPTANSVKSPPPEALPPSGSNSNSVSEKNGSKSSSSCHNQLCKQGPGAVAGVVTAGAFALAIFAGALIWVYSKKFKTVKKSDSLASDVIKQPKEFSYKELKTATRCFNTNRIIGHGAFGTVYKGILEETGDIVAVKRCSHSTQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARIPLPWPHRKKILLGVASALAYLHQECENQVIHRDIKTSNIMLEEGYNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRASDKTDVFSYGAVVLEVASGRRPIEKEGNNNNNNGVVGKNVGTNNSNLVDWVWSLHREGRLLMAADSRLGGEFEEEEMINVLLIGLACSNPDPMIRPTMRNVVQMLVGEAQVPIVPRTKPSTSFSTAHLLLSLQDSVSDFNGLITISPSSSERSFNGGETV 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8645615 8648159 + Conep19aG0130000.1 Cone19ag1265 459702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1265 725 Gene3D Phosphorylase Kinase; domain 1 351 464 - -
Cone19ag1265 725 CDD STKc_IRAK 395 670 - -
Cone19ag1265 725 MobiDBLite consensus disorder prediction 300 320 - -
Cone19ag1265 725 Pfam Legume lectin domain 34 263 IPR001220 GO:0030246(InterPro)
Cone19ag1265 725 FunFam L-type lectin-domain containing receptor kinase VIII.1 353 464 - -
Cone19ag1265 725 Gene3D - 32 268 - -
Cone19ag1265 725 ProSitePatterns Protein kinases ATP-binding region signature. 395 418 IPR017441 GO:0005524(InterPro)
Cone19ag1265 725 FunFam L-type lectin-domain containing receptor kinase VIII.1 465 688 - -
Cone19ag1265 725 SUPERFAMILY Protein kinase-like (PK-like) 370 702 IPR011009 -
Cone19ag1265 725 SMART serkin_6 389 670 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1265 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1265 725 PANTHER - 38 685 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)
Cone19ag1265 725 Pfam Protein kinase domain 390 668 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1265 725 ProSiteProfiles Protein kinase domain profile. 389 679 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1265 725 CDD lectin_legume_LecRK_Arcelin_ConA 50 256 IPR001220 GO:0030246(InterPro)
Cone19ag1265 725 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 276 IPR013320 -
Cone19ag1265 725 FunFam L-type lectin-domain containing receptor kinase VIII.1 32 271 - -
Cone19ag1265 725 Gene3D Transferase(Phosphotransferase) domain 1 465 677 - -
Cone19ag1265 725 MobiDBLite consensus disorder prediction 267 320 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1007 Cone-Chr12:8523710 Cone19ag1265 Cone-Chr19:8645615 8.86E-10 dispersed
Cone14ag1225 Cone-Chr14:9937651 Cone19ag1265 Cone-Chr19:8645615 2.79E-199 dispersed
Cone15ag1246 Cone-Chr15:9822936 Cone19ag1265 Cone-Chr19:8645615 1.02E-194 dispersed
Cone19ag1265 Cone-Chr19:8645615 Cone19ag1343 Cone-Chr19:8943281 1.06E-120 dispersed
Cone13ag1278 Cone-Chr13:9613352 Cone19ag1265 Cone-Chr19:8645615 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82416 PF03141 Methyltransf_29 1.30E-131 CL0063 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1265 - - - 0.0