Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone19ag1277 | ATGTACACGACGGAGAACATCGTCGGAGAGCATAGCGGCGGTGATTTCAATCTGGATGGCGATATATTGGATGTGTACTTTCCTCAGAGCCAGTTCACTGTCGAAAATGGATGGCTAAAGCTGATCTCACAGCTCATTTTTTTCTTTTCTTCTCCATCCGGTCAAATCCTTGCCTCTCAGGTTAAAGAGGACGGTGATGGTATCTTTGTTCTGTCGATTGACTTTCAACAATTACGGAAAATATGCGAAGTTGGTGAATTTTATGCTATGTTAGAGGATACTCCTAAAATTGCTCTAAAATGTATGAGCACGGCACTTCACCAGATTCTATTGACCATAGGAGAGAGCAGGTTGGAATGTAGTGCGAAAGTGATTATTCGCCTGCACAATTACTCACAGTCTATTATCACTCTGAAGAACTTAAAAGCAGCTTATATCGATAAACTTGTGTCCGTGCACGGTACTGTGGTTAAAGTAAGCATGGTCAAGCCTCTGGTGGTACAAATGACTTTTGATTGTGCAAAGTGTAAAAGCAGCATCACACGCATCTTTCCTGATGGAAAGTTTTCACCACCACCAACTTGTGAGCTACATGGATGCAAAAGCAAAACATTTCTTCCAATTCGATCAACTGCCCGAGCAATAGATATTCAGAAAATACGGGTACAGGAACTTATTAAGTCTGAAGATCGTGAAGAAGGTAGGGTTCCTCGGACTGTAGAATGTGAACTGACTGACGATCTTGTAGATGCATGCATTCCAGGGGATGTGGTGACAGTTACTGGAATTATTCGAGTAATTAACAATTACATGGACATTGGTGGAGGAAAATCTAAGAGTAAAAATCAAGGATTTTACTATTTATATCTGGAAGCAGTTTCAATCAGAAACTCCAAGTCACAATCTGTCAATCAGGATTCGCAAGAGTCTGATTCTCATGCCAGGGTAACGGAGCTGCTTGACTTATTCTCATTCTCTCCGCGGGATTTGGAATTTATTGTGAAGTTCTCAGGGGAACATGGCTCAGATGTCTTCCGGCAAATCCTTCAGTCTGTGTGTCCATCTATATACGGACATGAGCTTGTTAAAGCGGGAATAACACTAGCGCTATTTGGAGGTGTACAAAAGCATGTAAAAGACCAGAACAAGGTTCCTGTCAGAGGGGACATTCATGTCATTATAGTTGGTGATCCTGGACTAGGCAAGAGCCAACTGCTACAAGCAGCAGCTGCTCTTTCTCCACGTGGTATTTATGTCTGTGGTAATGCCACCACGAAAGCTGGTCTAACTGTAGCTGTTGTGAAGGACCCCATGACAAGTGACTATTCTTTTGAGGCTGGTGCTATGGTACTTGCGGATGGTGGACTATGCTGCATCGATGAGTTTGATAAAATGTCTGCTGCACATCAGTCCCTCCTAGAAGCCATGGAGCAACAATGTGTCTCAATTGCAAAGGCTGGGTTGGTAGCTAGTTTATCAGCGCGCACTTCTGTCCTTGCTGCAGCAAATCCTGTTGGAGGTCATTATAACCGTGCAAAAACTGTGAATGAAAACTTGAAAATGAGTGCTCCTCTTCTTTCACGGTTTGATTTAGTCTTTATGCTGCTGGATAAACCAGATGAGCTTCTGGATAAGCGAGTCTCAGAGCACATCATGTCACTACATGCTGGATATGGGGAACATTTTCCTTCGTCAGAAAAGCCATGCAAAGGATCAGGGTTCTCCCCAGTTATGCCTTCTCCCTCACGTAATACCACATCAGAGAACGCTGGCGTAACAGGTGGCTCTTTAGTTTCAAGGATGAGACTTGATCCATTGAGGGATAGTGATTTTGTTCCCTTACCTGGCCAACTTCTTCGCAAATATGTAGCTTATGCAAGAAGCTATGTCTTCCCCAGGATGTCAAAGGCGGCGGCAGAAATCCTGCAGAAGTTTTACTTGCGCCTCAGAGACCACAATTCATCAGCTGATGGCACTCCAATAACAGCTAGGCAGCTGGAAAGTCTAGTGAGGTTGGCAGAAGCTCGAGCTAGAATCGATTTAAGAGAAGAAATAACAGCTCAAGATGCTATGGATGTAGTTGAAATAATGAAGGAATCGCTCTATGATAAGTATGTGGATGAGCACGGCATTGTGGATTTCGGAAGAAGTGGAGGGATGAGTCAACAAAAAGAAGCCAAACGGTTTCTTAGTGCCCTCAATAAGCAATCGGATTTGCAACAGAAAGACTGTTTTTCAATTTCTGAAATATATAGTTTAGCGGATAGAATCTGTCTTAGAGTTCCGGATATCGACACCTTTATAGAGAATCTCAACAGTGTTGGTTATCTACTTAAGAAGGGACCAAAGACGTATCAGGTGTTATCATCATCTTATACAGGTCAATCATCAAGGTCAAGGGGCTAA | 2406 | 43.06 | MYTTENIVGEHSGGDFNLDGDILDVYFPQSQFTVENGWLKLISQLIFFFSSPSGQILASQVKEDGDGIFVLSIDFQQLRKICEVGEFYAMLEDTPKIALKCMSTALHQILLTIGESRLECSAKVIIRLHNYSQSIITLKNLKAAYIDKLVSVHGTVVKVSMVKPLVVQMTFDCAKCKSSITRIFPDGKFSPPPTCELHGCKSKTFLPIRSTARAIDIQKIRVQELIKSEDREEGRVPRTVECELTDDLVDACIPGDVVTVTGIIRVINNYMDIGGGKSKSKNQGFYYLYLEAVSIRNSKSQSVNQDSQESDSHARVTELLDLFSFSPRDLEFIVKFSGEHGSDVFRQILQSVCPSIYGHELVKAGITLALFGGVQKHVKDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAALSPRGIYVCGNATTKAGLTVAVVKDPMTSDYSFEAGAMVLADGGLCCIDEFDKMSAAHQSLLEAMEQQCVSIAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKMSAPLLSRFDLVFMLLDKPDELLDKRVSEHIMSLHAGYGEHFPSSEKPCKGSGFSPVMPSPSRNTTSENAGVTGGSLVSRMRLDPLRDSDFVPLPGQLLRKYVAYARSYVFPRMSKAAAEILQKFYLRLRDHNSSADGTPITARQLESLVRLAEARARIDLREEITAQDAMDVVEIMKESLYDKYVDEHGIVDFGRSGGMSQQKEAKRFLSALNKQSDLQQKDCFSISEIYSLADRICLRVPDIDTFIENLNSVGYLLKKGPKTYQVLSSSYTGQSSRSRG | 801 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 8691936 | 8696121 | + | Conep19aG0131200.1 | Cone19ag1277 | 459714 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone19ag1277 | 801 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 354 | 707 | IPR027417 | - | |
Cone19ag1277 | 801 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 64 | 786 | IPR031327 | GO:0003677(InterPro)|GO:0003697(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0017116(PANTHER)|GO:0032508(InterPro)|GO:0042555(PANTHER) | |
Cone19ag1277 | 801 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 387 | 402 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
Cone19ag1277 | 801 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 498 | 510 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
Cone19ag1277 | 801 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 447 | 461 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
Cone19ag1277 | 801 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 525 | 533 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
Cone19ag1277 | 801 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 474 | 487 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
Cone19ag1277 | 801 | FunFam | DNA helicase MCM8 isoform X1 | 165 | 216 | - | - | |
Cone19ag1277 | 801 | Pfam | MCM OB domain | 138 | 267 | IPR033762 | - | |
Cone19ag1277 | 801 | SUPERFAMILY | Nucleic acid-binding proteins | 67 | 268 | IPR012340 | - | |
Cone19ag1277 | 801 | SMART | AAA_5 | 388 | 540 | IPR003593 | GO:0016887(InterPro) | |
Cone19ag1277 | 801 | Pfam | MCM AAA-lid domain | 618 | 701 | IPR041562 | - | |
Cone19ag1277 | 801 | Gene3D | - | 138 | 268 | IPR012340 | - | |
Cone19ag1277 | 801 | Pfam | MCM P-loop domain | 342 | 555 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
Cone19ag1277 | 801 | Gene3D | - | 322 | 710 | IPR027417 | - | |
Cone19ag1277 | 801 | CDD | MCM8_WHD | 723 | 788 | - | - | |
Cone19ag1277 | 801 | Gene3D | - | 165 | 215 | - | - | |
Cone19ag1277 | 801 | MobiDBLite | consensus disorder prediction | 569 | 593 | - | - | |
Cone19ag1277 | 801 | CDD | MCM8 | 348 | 700 | - | - | |
Cone19ag1277 | 801 | ProSiteProfiles | MCM family domain profile. | 344 | 551 | IPR001208 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) | |
Cone19ag1277 | 801 | MobiDBLite | consensus disorder prediction | 577 | 593 | - | - | |
Cone19ag1277 | 801 | SMART | mcm | 134 | 702 | IPR031327 | GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone19ag1277 | Cone-Chr19:8691936 | Cone3ag1220 | Cone-Chr3:30947681 | 6.22E-88 | dispersed | |
Cone19ag1277 | Cone-Chr19:8691936 | Cone16ag0446 | Cone-Chr16:6781760 | 9.55E-73 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone19ag1277 | K10737 | - | csv:101211972 | 1236.48 |