Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone19ag1281 | ATGGCGTCCTCCTCCTCTGCTCAGATGCCAGACTTTGTAAGCTTGGATTGTGGAGGACAAGAAAGTTTCACTGATAACATAGGTATAGAATGGAGTCCAGACAATCAACCACGTTATGGAGAAACAGCAAACATATCTGTTGCAAATGAGACGAGAAAGCAATACACAACGGTAAGACACTTCCCTGCTGATTCTAGGAAGTATTGTTACACACTTAATGTCACAAGTAGGACCCGGTACCTGATCAGGGCGACATTCTTATATGGTAACTTTGACAAAAACAATGTCTATCCGAAATTTGATGTTTCTCTTGGGGCAACTCATTGGTCAACTATCATCGTTTCTGATGCTGATACAATGGGGGTTATAGAGCTTATATTCCTTGCTTCAAGTCCTACTGTCAGTGTTTGTTTATCAAATGCAACAACTGGGCAGCCATTTATATCTACGCTTGAGCTCAGACAATTCAATGGCTCAATTTACTATACGGAATATGAAAATCAGTTTTACCTTAGTGTCTCTGCAAGAATAAATTTTGGAGCTGAATCTGAAGCTCCTGTAAGGGGATTTCTTTCTCCATATATGTACCCAGATGACCCATTTGACTGA | 609 | 40.39 | MASSSSAQMPDFVSLDCGGQESFTDNIGIEWSPDNQPRYGETANISVANETRKQYTTVRHFPADSRKYCYTLNVTSRTRYLIRATFLYGNFDKNNVYPKFDVSLGATHWSTIIVSDADTMGVIELIFLASSPTVSVCLSNATTGQPFISTLELRQFNGSIYYTEYENQFYLSVSARINFGAESEAPVRGFLSPYMYPDDPFD | 202 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 19 | 8712022 | 8713092 | - | Conep19aG0131600.1 | Cone19ag1281 | 459718 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone19ag1281 | 202 | PANTHER | OS07G0107800 PROTEIN-RELATED | 8 | 202 | - | - | |
| Cone19ag1281 | 202 | Pfam | Malectin-like domain | 15 | 202 | IPR024788 | - | |
| Cone19ag1281 | 202 | Gene3D | - | 12 | 157 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone19ag1281 | Cone-Chr19:8712022 | Cone19ag1094 | Cone-Chr19:7940086 | 4.96E-27 | dispersed | |
| Cone19ag1281 | Cone-Chr19:8712022 | Cone13ag1294 | Cone-Chr13:9676434 | 2.63E-112 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone19ag1281 | - | - | - | 0.0 |