Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1291 ATGGCCAATTATATCTTGGAAGATGAAAGCCAGTTTGAATCTGGGCCATTGACTTTCAACGATCTTGAACCTTCCGGAACTTTCACCGGCATCTATGATGGCCATGGAGGCCCACAAGCCTCCCACTATGTCGCTCAAAATCTCTTCTCCAATCTCAAGAAATTTGCGACTATGCATGAAGGAATATCTGAAAATGTGATCAGAAAGAGTTATGCAGCAACAGAAGAAGGATTTCTGTCTCTTGTGCAGAAAAAATGGCTTAATCAATCGGAAATTGCATCTGCTGGATCATGTTGTTTGATTGGGATTATATGCAATGGATTTCTATATATAGCAAATGCAGGGGATTCAAGAGTAGTACTTGGTAAAACTGTAAGAACAACCAAAGAAGTCATAGCAGTTCAATTATCTACAGAGCACAATGCAAGCATAGAGTCAGTTAGACAAGAGCTTCGATCAATTCATCCAGAAGATCCACAAATTGTCGTACAAAAACATAATGCTTGGCGTGTCAAAGGAATCATACAGGTTTCAAGAGCGATTGGTGATGCGTATTTGAAGAAGGCAGAATTTAACAGAGAGCCACTGCTACCCAAATTTAGGCTGCCCGAGCCTTTTCATAAACCAATTATTAGTGCTGAGCCGACCGTATCGGTACATAAACTCTGCCCAGAGGATCGGTTTTTGGTTTTTGCTTCGGATGGTCTGTGGGAGCACCTTAGCAATGACAAGGTTGTAGATATTGTCAATACTACCTCTAGAAATGGGATTGCGAGGAGGCTCGTGGAGGCTGCACTTCAAGAAGCGGCTAAGAGAAGAGAAATGAGATATTCAGACCTAAAGAAGATCGACAGAAGAGTGAGAAGACACTTTCATGATGATATTACAGTTGTAGTTGTGTTTTTAGATAGTGATAGAATGAATCTCAGCACTCCCGTTTCGATCCGAGGAGGTGGAGATCTTCTTTCCCCTCCAAACCTTTAA 984 41.67 MANYILEDESQFESGPLTFNDLEPSGTFTGIYDGHGGPQASHYVAQNLFSNLKKFATMHEGISENVIRKSYAATEEGFLSLVQKKWLNQSEIASAGSCCLIGIICNGFLYIANAGDSRVVLGKTVRTTKEVIAVQLSTEHNASIESVRQELRSIHPEDPQIVVQKHNAWRVKGIIQVSRAIGDAYLKKAEFNREPLLPKFRLPEPFHKPIISAEPTVSVHKLCPEDRFLVFASDGLWEHLSNDKVVDIVNTTSRNGIARRLVEAALQEAAKRREMRYSDLKKIDRRVRRHFHDDITVVVVFLDSDRMNLSTPVSIRGGGDLLSPPNL 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8745634 8748165 - Conep19aG0132600.1 Cone19ag1291 459728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1291 327 Pfam Protein phosphatase 2C 20 271 IPR001932 -
Cone19ag1291 327 SUPERFAMILY PP2C-like 20 303 IPR036457 -
Cone19ag1291 327 PANTHER PROTEIN PHOSPHATASE 7 301 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone19ag1291 327 SMART PP2C_4 3 300 IPR001932 -
Cone19ag1291 327 CDD PP2Cc 19 302 IPR001932 -
Cone19ag1291 327 Gene3D - 1 309 IPR036457 -
Cone19ag1291 327 FunFam Phosphatase 2C family protein 1 311 - -
Cone19ag1291 327 ProSiteProfiles PPM-type phosphatase domain profile. 4 302 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1291 Cone-Chr19:8745634 Cone8ag0870 Cone-Chr8:8576582 1.07E-147 dispersed
Cone13ag1304 Cone-Chr13:9722631 Cone19ag1291 Cone-Chr19:8745634 1.62E-172 wgd
Cone19ag1291 Cone-Chr19:8745634 Cone3ag0302 Cone-Chr3:1556709 4.93E-145 wgd
Cone19ag1291 Cone-Chr19:8745634 Cone5ag0316 Cone-Chr5:1328554 1.70E-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1291 - - - 0.0