Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1306 ATGGATGTCTGTAGATGGTGTAGCGCTGCGAAGCCTTTCTTCGCTGTTATATTCTTGCAGTTTGGGCTAGCAGGAATGGATATTCTTTCAAAGGCAGCACTAAATCAAGGGATGAGCAACTACGTGCTTGTCGTATATAGACATGTTGTCGCTACTATAGCCGTTGCTCCCTTCGCACTGGTTTTCGACAAGAAAGTAAGACCGAAAATGACACTTCCGATTTTCATCAAGATCACGGCTCTCGCCTTGCTAGAGCCAGTTATCGATCAAAATTTGTATTTCCTAGGGATGAGATACACTACAGCGACGTTTGCAGCCGCTATGTGCAATATTCTTCCTGCCATTACTTTCGTAATGGCTTGTGTTCTTAGACTTGAGAAGGTGAAGCTTAGAAGCATTAGAAGCCAGGCAAAGATTATAGGAACTCTAGCAACTGTTGCTGGGGCTATGGTGATGACTTTACTAAAGGGTCCAATTATCGAGCTCATTTGGACCAAAAGAAGTACGGATAATGAACAACAGCAAAAAACCGAAATAAGCCTTCAAAATTCGATTAAGGGCGCGCTAATGATTACTATCGGATGCTTCAGTTGGGCTTGTTTCATGAATCTTCAAGCAATTACCCTGAAATCATACCCGGCCGAGCTGTCTTTAACGGCTTGGATATGTCTGATGGGTACGGTGGAGGGGACTGCCGTGGCACTCGTGATGGAAAGAGGAAATACTGCAGTTTGGAGCATAACATGGGGAACGAAACTACTAGCAGCTGTTTATAGTGGCATATTTTGTTCTGCACTAGCTTACTATATTCAAGGACTAGTAATGAAAGACAGAGGTCCGGTTTTCGTTACCGCATTTAGTCCTCTAAGTATGGTTATTGTTGCTGTAATGAGCTCGTTTATACTTGCCGAAACACTTTATCTTGGAAGGGTACTTGGTGCCGTGGTCATAATAGCGGGACTATATCTTGTCGTTTGGGGTAAAAGTAAGGATGAAACAACACAAACTGTGTTTAAGGAAGAGATAGCATCGCCTGAAAAGAATACGGAGACTAACGGGAAGGAAAATTTCAATCAGGTCATCGCTAGTGACGCATCAATTGAACGGAAATTGGTAACTGAAGTTTAA 1128 42.91 MDVCRWCSAAKPFFAVIFLQFGLAGMDILSKAALNQGMSNYVLVVYRHVVATIAVAPFALVFDKKVRPKMTLPIFIKITALALLEPVIDQNLYFLGMRYTTATFAAAMCNILPAITFVMACVLRLEKVKLRSIRSQAKIIGTLATVAGAMVMTLLKGPIIELIWTKRSTDNEQQQKTEISLQNSIKGALMITIGCFSWACFMNLQAITLKSYPAELSLTAWICLMGTVEGTAVALVMERGNTAVWSITWGTKLLAAVYSGIFCSALAYYIQGLVMKDRGPVFVTAFSPLSMVIVAVMSSFILAETLYLGRVLGAVVIIAGLYLVVWGKSKDETTQTVFKEEIASPEKNTETNGKENFNQVIASDASIERKLVTEV 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8813105 8814835 - Conep19aG0134100.1 Cone19ag1306 459743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1306 375 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020(InterPro)
Cone19ag1306 375 Pfam EamA-like transporter family 16 152 IPR000620 GO:0016020(InterPro)
Cone19ag1306 375 PANTHER WAT1-RELATED PROTEIN 15 344 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cone19ag1306 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 329 - -
Cone19ag1306 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 155 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1306 Cone-Chr19:8813105 Cone4ag1395 Cone-Chr4:11243721 3.36E-127 dispersed
Cone10ag0293 Cone-Chr10:1389563 Cone19ag1306 Cone-Chr19:8813105 5.14E-182 wgd
Cone11ag1117 Cone-Chr11:8677300 Cone19ag1306 Cone-Chr19:8813105 3.56E-136 wgd
Cone13ag1320 Cone-Chr13:9780093 Cone19ag1306 Cone-Chr19:8813105 1.08E-214 wgd
Cone18ag0463 Cone-Chr18:2241742 Cone19ag1306 Cone-Chr19:8813105 2.34E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1306 - - - 0.0