Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1316 ATGGAGGCCTCTTGGACCCACTTTTCGGATTACTCAACTAACCTTTTGCACAGGGGGTCGACCCGAATCCCAAAAGTGCAGTCTCTTTTACAAGATTTCTTCAACGGGAAGGAGTTGTGTAAAAATATTAACCCAGACGAGGCTGTAGCCTATGGAGCAACTGTTCAGGCTGCTATATTGATCGGAGAAGGGAACCAGAAGGTGCAAGACCTCCTTCTCCTTGACGTCCCCCCTCTATCCCTTGGATTAGAAACTGCAGGTGGAGTCATGACCGTTTTGATTCCTCGTAACACGACTATTCCGACCAAGAAAGAGCAGGTTGTCTCTACTTGTTCCGACAACCAGCCTGGAGTCTTAATCCGAGTCTATGAAGGAGAAAGAACAAGAACAAGAGACAACAACTTGTTGGGTAAATTCGAACTTTCCGGAATCCCTGCAGCTCCGAGGGGGGCTGTCAAAAGAGGGGAGATAGAGAAGATAGTGCAGGAAGCAGAGAAATACAAGTCGGAAGATGAGGATCATAAGAAGAAAGTTGAGGCCAAGAATGCTTTGGAAAATTATGCCTATAATATGAGGAACACAGTGAAGGATGAGAAGATCGGGTCGAAGTTACCCGCGAGTGATAAGAAGAACATCGATGATGCGATCGAGGGGACGATTCAAAGGCTTGATAGTAACCAGCTTGCGGAGGCAGATGAATTTGAATATAAGATGGAGCTGGAGAGTATGTGTAATCCGAGCATTGCAAGATGTATGAAGAAGGTGCTGGTGCTAATATGGGTAGCGGCAGTGGTGGCGGGATGGATAATGCCGCTGCCCCAGCTGGTGGTGCCGGACCTAAGATTGAGGAGTCGCCGACAAGCATCCTATGAAATCAAACGTGCAATGTGGGCAGTAGCCATGTACAACACAACACAAGCTTGGAAGTTGGAACAGAGAAAGTGCACTTTTTGCAATGGTCCTAGATTTCGAACAGTCATTGTAACTAAAGTCATAATCTCATCTTAA 1008 46.53 MEASWTHFSDYSTNLLHRGSTRIPKVQSLLQDFFNGKELCKNINPDEAVAYGATVQAAILIGEGNQKVQDLLLLDVPPLSLGLETAGGVMTVLIPRNTTIPTKKEQVVSTCSDNQPGVLIRVYEGERTRTRDNNLLGKFELSGIPAAPRGAVKRGEIEKIVQEAEKYKSEDEDHKKKVEAKNALENYAYNMRNTVKDEKIGSKLPASDKKNIDDAIEGTIQRLDSNQLAEADEFEYKMELESMCNPSIARCMKKVLVLIWVAAVVAGWIMPLPQLVVPDLRLRSRRQASYEIKRAMWAVAMYNTTQAWKLEQRKCTFCNGPRFRTVIVTKVIISS 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8848178 8851038 + Conep19aG0135100.1 Cone19ag1316 459753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1316 335 Gene3D - 155 251 IPR029048 -
Cone19ag1316 335 Pfam Hsp70 protein 18 151 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Cone19ag1316 335 Pfam Hsp70 protein 154 248 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Cone19ag1316 335 Gene3D - 44 58 - -
Cone19ag1316 335 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 179 253 IPR029048 -
Cone19ag1316 335 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 67 185 IPR029047 -
Cone19ag1316 335 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 60 154 IPR029047 -
Cone19ag1316 335 Gene3D - 13 43 - -
Cone19ag1316 335 Coils Coil 157 177 - -
Cone19ag1316 335 PANTHER HEAT SHOCK PROTEIN 70KDA 18 215 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Cone19ag1316 335 PRINTS 70kDa heat shock protein signature 43 63 - -
Cone19ag1316 335 PRINTS 70kDa heat shock protein signature 11 27 - -
Cone19ag1316 335 PRINTS 70kDa heat shock protein signature 70 89 - -
Cone19ag1316 335 SUPERFAMILY Actin-like ATPase domain 15 62 IPR043129 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1316 Cone-Chr19:8848178 Cone7ag0556 Cone-Chr7:2675379 2.37E-109 dispersed
Cone1ag0654 Cone-Chr1:6219559 Cone19ag1316 Cone-Chr19:8848178 1.00E-112 wgd
Cone1ag1289 Cone-Chr1:56259549 Cone19ag1316 Cone-Chr19:8848178 3.31E-16 wgd
Cone10ag0303 Cone-Chr10:1439048 Cone19ag1316 Cone-Chr19:8848178 5.16E-113 wgd
Cone19ag1316 Cone-Chr19:8848178 Cone3ag0331 Cone-Chr3:1685177 1.18E-111 wgd
Cone19ag1316 Cone-Chr19:8848178 Cone5ag0274 Cone-Chr5:1161132 7.55E-111 wgd
Cone19ag1316 Cone-Chr19:8848178 Cone5ag1163 Cone-Chr5:5226230 9.07E-112 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1316 K03283 - rcu:8268250 370.163