Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1332 ATGATGGCTTTTGATCCACGTCTAAGGGGATACTCGAGCTCCATGAATGGGATCCAAGTAGGAAATAACTCTCTGTCCATTCATTTGAATCAGAGTGTAGTTGTACGTCCATTCCTAGATCACAGTCTTAACGAGCTACCCTATCCATCGCCGACTAACATAGCCTCGTCTTCCAGTAATATCACCTCGTGTTCGAGCTTCAGCCACGAAGATGATTCTCTGGAAGATTGTGATTTTTCTGATTCTGTTTTGAGCTACATAAACCAGATGCTTATGGAAGAAGATATGGAGGAGAAGACGTGCATGCTTCATGATTCTTTGGATCTTCAAGCAGCTGAGAAATCATTTTATGATGTCCTTGGGAAAAAATATCCCCCTTCACCGGAACCAACCAGGCTGTATACCAGTGGATACAGTGAGAGACTAGATGATGATTTCTCTGGAAGCTTTATCAATTACCTCAGTTATAATAGTAATAACAATGTCTATTTTGGTGATGATTGCCAGATTCAGAATCTAGGGGAAGAAATCTCTCAAATAAGAAGCCATCCTGTTGATACTGTTTATCAGTTATCTAATTGCTCTTCAAACAGTATAGTTACCCGTGTAGATGGACCGGCAGACTCTCCGAGCAGTACAATTGAAGCTCCCAAGTCGAATAATGGAAACCAGTCTGTTTGGCAGTTTAGGAAAGGGGTTGAGGAGGCTAGAAAGTTTCTACCTAGTGGAAATGAGTTGTTTCTTAATTTGGAGGGTAACAGTTTGCTTACCAAGGAGCTGGAGGTGGGAAAAATGAATGAGGCTGTTGTTAAGGTGGAGGGGAAGGATGAGGCGGGGTTCTTGCCTAATGAGCCACGGGGAAGGAAGAATCATCTTAGAGATGATAGAGATTCAGAGGAAGAGAGAAACAGCAAGCAAGCGGCTGTATTTACTGAATCGACCTTGCGGTCAAAGATGTTTGATATTGTTTTGCTTTGTAGTGCAGGGGAAGGACTTAATCGATTGGAAATTCTTCGGAATGAGTTGAAGAAAGCAAAGAATAACAGTTTACCGCAGAACGGGCAATCAAAAGGGTCTAATGGGGGAAGAGGTCGTGGAAAGAAACAAAGTGGAAAAAAGGAGGTGATAGATTTGAGAACTCTCCTTGTTCTTTGTGCACAAGCAGTTGCAGCTGATGATCATAATAGTGCAAGTGAACTGCTAAGGCAGATCAGGCAACATTCTTCTCCTTTTGGGGATGGGAATCAGAGATTAGCCCATTGCTTAGCAGATGGCTTAGAGGCACGCTTGGCTGGTACAGGTAGCCAAATTTACAAGGGCCTTGTTAATAAGAAAAGATCTGCTGCAGATCTCCTAAAAGCTTACCACCTATACCTCGCCGCATGCCCGTTTAGGAAGATGTCTAATTTCACCTCAAACAAGACCATAATGAAATTAGCAGCAAATGCAACTAGGCTGCATATCATTGATTTTGGTATCCTTTATGGTTTCCAATGGCCCACTCTTATTCAGAGGATCTCTTGGAGAGAGGGTGGACCGCCAAGGCTTAAGATTACTGGCATAGAGTATCCCCAGCCTGGATTTCGTCCTGCTGAGAGAGTTGAGGAAACAGGACGACGTTTGGAAAACTATGCTGAGAGTTTCAAGGTACCATTTGAGTACCATGCTATAGCTCAAAAATGGGATACTATTAAAGTTGAGGATCTCAAGATAGACCCAGATGAGGTCCTGGTCGTAAATTGTTTGTATCGGGCTAAGAACTTGCAGGATGAGAGTGTTGCAGTAGATAGTGCAAGAAATGCTTTTCTTGATTTGATAACGAAGATTAATCCCACTATTTTTATGCATGGAGTTGTTAACGGAGCATATAACGCTCCTTTCTTTGTCACCCGTTTTCGAGAGGTTCTGTTTCATTATTCTGCTCTGTTTGATATGCTTGAAACTGTTGTGCCCAGAGAGGATAGGGAGAGAATGCTAATTGAGACGGAGATATTTGGCAGAGAAGCTCTGAATGTTATAGCGTGTGAGGGTTGGGAGAGAGTGGAAAGACCAGAGACATATAAGCAGTGGCAAGTTCGCAATATGAGGGCTGGATTTGTGCAAGTGCCATTGGACAGAGAACTACTGGAAAGGGCAAGTGAGAAAGTGAGGTTAAGTTACCATAAGGATTTTCTGATTAATGAAGACAGCAAATGGATGTTGCAGGGATGGAAGGGACGGATCATCTACGCCCTCTCTGCTTGGAAGCCGGCTTAG 2256 43.13 MMAFDPRLRGYSSSMNGIQVGNNSLSIHLNQSVVVRPFLDHSLNELPYPSPTNIASSSSNITSCSSFSHEDDSLEDCDFSDSVLSYINQMLMEEDMEEKTCMLHDSLDLQAAEKSFYDVLGKKYPPSPEPTRLYTSGYSERLDDDFSGSFINYLSYNSNNNVYFGDDCQIQNLGEEISQIRSHPVDTVYQLSNCSSNSIVTRVDGPADSPSSTIEAPKSNNGNQSVWQFRKGVEEARKFLPSGNELFLNLEGNSLLTKELEVGKMNEAVVKVEGKDEAGFLPNEPRGRKNHLRDDRDSEEERNSKQAAVFTESTLRSKMFDIVLLCSAGEGLNRLEILRNELKKAKNNSLPQNGQSKGSNGGRGRGKKQSGKKEVIDLRTLLVLCAQAVAADDHNSASELLRQIRQHSSPFGDGNQRLAHCLADGLEARLAGTGSQIYKGLVNKKRSAADLLKAYHLYLAACPFRKMSNFTSNKTIMKLAANATRLHIIDFGILYGFQWPTLIQRISWREGGPPRLKITGIEYPQPGFRPAERVEETGRRLENYAESFKVPFEYHAIAQKWDTIKVEDLKIDPDEVLVVNCLYRAKNLQDESVAVDSARNAFLDLITKINPTIFMHGVVNGAYNAPFFVTRFREVLFHYSALFDMLETVVPREDRERMLIETEIFGREALNVIACEGWERVERPETYKQWQVRNMRAGFVQVPLDRELLERASEKVRLSYHKDFLINEDSKWMLQGWKGRIIYALSAWKPA 751
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8911519 8915140 + Conep19aG0136700.1 Cone19ag1332 459769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1332 751 MobiDBLite consensus disorder prediction 346 363 - -
Cone19ag1332 751 MobiDBLite consensus disorder prediction 276 308 - -
Cone19ag1332 751 MobiDBLite consensus disorder prediction 276 306 - -
Cone19ag1332 751 Coils Coil 328 348 - -
Cone19ag1332 751 MobiDBLite consensus disorder prediction 346 371 - -
Cone19ag1332 751 MobiDBLite consensus disorder prediction 203 224 - -
Cone19ag1332 751 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 352 748 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cone19ag1332 751 ProSiteProfiles GRAS family profile. 369 749 IPR005202 -
Cone19ag1332 751 Pfam GRAS domain family 378 749 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1332 Cone-Chr19:8911519 Cone1ag0631 Cone-Chr1:6106925 1.53E-201 dispersed
Cone1ag0629 Cone-Chr1:6095291 Cone19ag1332 Cone-Chr19:8911519 2.59E-157 wgd
Cone1ag1271 Cone-Chr1:56198858 Cone19ag1332 Cone-Chr19:8911519 1.81E-226 wgd
Cone10ag0315 Cone-Chr10:1500281 Cone19ag1332 Cone-Chr19:8911519 0 wgd
Cone13ag1347 Cone-Chr13:9890450 Cone19ag1332 Cone-Chr19:8911519 2.39E-45 wgd
Cone19ag1332 Cone-Chr19:8911519 Cone3ag0346 Cone-Chr3:1764971 8.53E-45 wgd
Cone19ag1332 Cone-Chr19:8911519 Cone5ag0258 Cone-Chr5:1097559 1.46E-222 wgd
Cone19ag1332 Cone-Chr19:8911519 Cone5ag1134 Cone-Chr5:5088153 1.03E-196 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45381 PF08449 UAA 1.80E-80 CL0184 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1332 K27753 - cit:102622070 971.844