Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1343 ATGAACTCAGTAATCTTCCTTCAACTCTTAGCCACTCTCTTCTTCCTGTCGATCCCAGCTTCATCCCAACTCACCTCCCTCTTCTATCCCGGTTTCGAAAACGCCGGTTCGAACTTAACCTTAAGCGGCAACGCAGAGATTCAGAAAAATGGCATCTTGAAGCTAACCAACGAGACCAGCAGGTTACTTGGCCACGCCTTTTGCTCTTCTCCTTTCCACTTCAAAAACTCATCCGCTAACAGTACAGTTTCTTCCTTTTCTACTTCATTCGCTTTCGTCATCGTTCCTGAATATCCTCGACTAGGCGGCCATGGCTTAGCTTTCACTATATCACCGTCTAAAGAGTTCGAAGCTCTGCCAAGTCAGTATCTAGGTCTGATGAACAACACCGATGTCGGAAACTTCTCGAACCACATCTTCGCCGTTGAGTTTGATACTGTACAAGATTTCGAGTTTGAAGATATTAATGATAATCATGTTGGCGTAGACTTAAACAGTATGACTTCGAACTTCTCTGTTTCTGCAGCTTATTTCACTGACGATTCGATAAAGCACGATCTGAATCTCAAAGGTGGGAAAGCGATTCAAGTTTGGATCAATTACGATGCATCTTCTAATGATCTAGACGTTACGCTTTCTCCTTTATCGTCGAAACCCAAAAAACCGATTTTGTCATATAAGGTAGATCTTTCGCCGATTTTTGAAGAGTTTATGTACGTTGGTTTCTCTGCTTCAACGGGTCTTCTAGCTAGCTCGCACTATATTCTGGGTTGGAGCTTTAAAATCAATGGACAAACTCAAGACTTAGATTTTTCCTCTCTTCCTGCCCTTCCAGGTCCTAAGAAAAACCACACAGCTTTAATTTTCGGAGTTTCAGTTACAGCTGTTATCTTGATCCTCTGTGTACTCTTTGTTTCGATTCTCATAATCAGGAAGATTAAGAACGCTGATATAATCGAGCCATGGGAGCTCGAAGTGGGCCCACATAGATACTCCTACAAGGAGCTCAAAAAGGCCACAAGACGCTTTAGAGACAAGGAGGTACTAGGCCATGGCGGATTCGGAAAAGTTTACAAAGGAACACTTCCCGATTCACAAACCCAAGTAGCCGTTAAGCGAATTTCGCAGGAATCAAATCAGGGTTTAAGAGAATTCGTGTCGGAAATTGCCACAATAGGCCGGCTTCGGCATAGAAACCTGGTTCAGTTATTCGGATGGTGTCGCCGTAAAGGTGATCTTCTTCTTGTGTACGATTTCATGGCGAATGGAAGCTTGGACAGGTTCATATTTGACGAGCCGAAAATGATTCTGACTTGGGAACAGAGGTTTAGAATCATAAAGGATGTAGCTTCAGGGCTTTTATACTTGCACGAAGGCTATGAACAAGTTGTGATTCACAGAGACTTAAAGGCTAGTAATGTTTTATTAGACAGTGAGTTAAATGGAAGATTAGGTGATTTTGGACTTGCTAGGTTGTATGAACACGGGACAAACCCGAGCACGACCCGGGTTGTAGGAACTTTAGGGTATATAGCCCCGGAAGTGCCTAAAACAGGAAAGGCTACACCGAGCTCAGATGTGTATGGATTTGGTATACTTTTGCTTGAAGTTGTTTGTGGGAGAAGACCTATTGAGCAAAAAGCATTGCCTGAGGAAATGATCTTGTTAGATTGGGTTTGGGATAAGTATTTGGAAGGGCGGCTTCTTGACATGGTTGATCCAAAGCTTGATGGGGATTTTAATGAAGTGGAGGTTGAGATGGTGTTGAAATTGGGTTTGATGTGTTCAAACAATGCGCCTTCAGCTAGGCCTACTATGAGGCAAACGGTGAGGTATTTGGACAGTGAGATTGGCATTCCGGAAGACTTGCGTGGACCCGATGGGGTTCCAGGAAGTAGGAAGAGTCATGGTGATGGGTTCGATGAGTTTGTGCACTCGTTGGATACTGATTCAATTAATAGGAGAACTTACTCGTCTGCTGGGAATAGAGATGTTGATGCTCGTTTCGCTTCTTTCTCTACTTCTTTTTCACTGATTAGTGGTAGAGATTAG 2052 43.37 MNSVIFLQLLATLFFLSIPASSQLTSLFYPGFENAGSNLTLSGNAEIQKNGILKLTNETSRLLGHAFCSSPFHFKNSSANSTVSSFSTSFAFVIVPEYPRLGGHGLAFTISPSKEFEALPSQYLGLMNNTDVGNFSNHIFAVEFDTVQDFEFEDINDNHVGVDLNSMTSNFSVSAAYFTDDSIKHDLNLKGGKAIQVWINYDASSNDLDVTLSPLSSKPKKPILSYKVDLSPIFEEFMYVGFSASTGLLASSHYILGWSFKINGQTQDLDFSSLPALPGPKKNHTALIFGVSVTAVILILCVLFVSILIIRKIKNADIIEPWELEVGPHRYSYKELKKATRRFRDKEVLGHGGFGKVYKGTLPDSQTQVAVKRISQESNQGLREFVSEIATIGRLRHRNLVQLFGWCRRKGDLLLVYDFMANGSLDRFIFDEPKMILTWEQRFRIIKDVASGLLYLHEGYEQVVIHRDLKASNVLLDSELNGRLGDFGLARLYEHGTNPSTTRVVGTLGYIAPEVPKTGKATPSSDVYGFGILLLEVVCGRRPIEQKALPEEMILLDWVWDKYLEGRLLDMVDPKLDGDFNEVEVEMVLKLGLMCSNNAPSARPTMRQTVRYLDSEIGIPEDLRGPDGVPGSRKSHGDGFDEFVHSLDTDSINRRTYSSAGNRDVDARFASFSTSFSLISGRD 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8943281 8945537 - Conep19aG0137800.1 Cone19ag1343 459780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1343 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1343 683 Pfam Legume lectin domain 26 274 IPR001220 GO:0030246(InterPro)
Cone19ag1343 683 Gene3D - 24 263 - -
Cone19ag1343 683 SUPERFAMILY Protein kinase-like (PK-like) 325 614 IPR011009 -
Cone19ag1343 683 CDD lectin_legume_LecRK_Arcelin_ConA 25 264 IPR001220 GO:0030246(InterPro)
Cone19ag1343 683 FunFam L-type lectin-domain containing receptor kinase S.4 420 625 - -
Cone19ag1343 683 FunFam L-type lectin-domain containing receptor kinase S.4 23 268 - -
Cone19ag1343 683 PANTHER - 39 620 IPR050528 GO:0005886(PANTHER)
Cone19ag1343 683 FunFam Lectin-domain containing receptor kinase A4.3 328 419 - -
Cone19ag1343 683 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Cone19ag1343 683 Pfam Protein kinase domain 344 609 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1343 683 ProSiteProfiles Protein kinase domain profile. 343 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1343 683 Gene3D Transferase(Phosphotransferase) domain 1 420 622 - -
Cone19ag1343 683 SMART serkin_6 343 673 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1343 683 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524(InterPro)
Cone19ag1343 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 280 IPR013320 -
Cone19ag1343 683 CDD STKc_IRAK 349 614 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0331 Cone-Chr10:1568374 Cone19ag1343 Cone-Chr19:8943281 2.03E-235 dispersed
Cone10ag0333 Cone-Chr10:1575907 Cone19ag1343 Cone-Chr19:8943281 9.51E-239 dispersed
Cone10ag0358 Cone-Chr10:1694423 Cone19ag1343 Cone-Chr19:8943281 3.59E-16 dispersed
Cone11ag1143 Cone-Chr11:8802768 Cone19ag1343 Cone-Chr19:8943281 1.67E-274 dispersed
Cone16ag0075 Cone-Chr16:371704 Cone19ag1343 Cone-Chr19:8943281 5.26E-151 dispersed
Cone16ag0076 Cone-Chr16:376673 Cone19ag1343 Cone-Chr19:8943281 4.76E-153 dispersed
Cone19ag1265 Cone-Chr19:8645615 Cone19ag1343 Cone-Chr19:8943281 1.06E-120 dispersed
Cone19ag1343 Cone-Chr19:8943281 Cone19ag1420 Cone-Chr19:9274178 1.38E-187 dispersed
Cone10ag0326 Cone-Chr10:1536026 Cone19ag1343 Cone-Chr19:8943281 1.09E-237 wgd
Cone18ag0439 Cone-Chr18:2140102 Cone19ag1343 Cone-Chr19:8943281 9.62E-272 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82420 PF00571 CBS 4.90E-11 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1343 - - - 0.0