Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1361 ATGGTAGAAGAAGTGAAGTTGTTTGGTTTTACAGGAAGCCCATTTAGCAGCAGAGTAGCCATCGCTCTGAAGCTAAAAGGAATAGAATATGAATACATTGAAGAGCAAGTGTATGTGGAAAAAAGCCCGTTGCTCCTAAAATACAACCCAGTTCACAAGAAGATCCCCGTTCTCCTCCACAATGGCAAACCCATTGCAGAATCTGTCGTCATACTCGACTACATTGAAGAGGCCTGGAAATCAGACTACCCCATCTTGCCCACTGACCCTTATCACAAAGCCCAATCTCGTTTCTGGGCCAAGTTCGTTGAAGAAAAGTGTCTGCCTGCTATAATGAATGCCTGCACGAGCCAAGGCGGGGAGGAAAGAGAGAAGGCGATAGAAGCAGCAAACGAGATTCTGAAAACACTCGAAAATGAGCTGAATGGGAAGCGTTTCTTTGGGGGAGAAACAATTGGGTTAGTAGATATTGTGGCCAATTTTATTGCTTACTGGGCTCCCATTCTTCAAGAGGTTATAGGGTTAGAGATCTTTACAGTTGAGAAAGTACCAAAACTCTTCAAATGGAGTGAAGAGTTTGTTACTCACAACGTTGTTCAACAAGCCCTGCCTCCTAAGCATCTTCTCGTTGCGTTTTTCGGCATCCGTTTTGGCGGTGGCAACAATGCATCCAAGTAA 678 44.54 MVEEVKLFGFTGSPFSSRVAIALKLKGIEYEYIEEQVYVEKSPLLLKYNPVHKKIPVLLHNGKPIAESVVILDYIEEAWKSDYPILPTDPYHKAQSRFWAKFVEEKCLPAIMNACTSQGGEEREKAIEAANEILKTLENELNGKRFFGGETIGLVDIVANFIAYWAPILQEVIGLEIFTVEKVPKLFKWSEEFVTHNVVQQALPPKHLLVAFFGIRFGGGNNASK 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9029175 9030374 + Conep19aG0139800.1 Cone19ag1361 459798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1361 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Cone19ag1361 225 CDD GST_N_Tau 5 79 - -
Cone19ag1361 225 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Cone19ag1361 225 CDD GST_C_Tau 90 216 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cone19ag1361 225 Gene3D Glutaredoxin 1 85 - -
Cone19ag1361 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 213 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cone19ag1361 225 SFLD Main.3: Omega- and Tau-like 3 214 IPR045073 -
Cone19ag1361 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 212 IPR010987 -
Cone19ag1361 225 FunFam Tau class glutathione S-transferase 86 218 - -
Cone19ag1361 225 Gene3D - 86 218 - -
Cone19ag1361 225 FunFam Tau class glutathione S-transferase 1 88 - -
Cone19ag1361 225 Pfam Glutathione S-transferase, C-terminal domain 107 195 IPR004046 -
Cone19ag1361 225 SFLD Main (cytGST) 3 214 - -
Cone19ag1361 225 SUPERFAMILY GST C-terminal domain-like 77 217 IPR036282 -
Cone19ag1361 225 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Cone19ag1361 225 Coils Coil 120 140 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0984 Cone-Chr19:7425941 Cone19ag1361 Cone-Chr19:9029175 1.72E-52 dispersed
Cone19ag1361 Cone-Chr19:9029175 Cone5ag0275 Cone-Chr5:1165211 1.72E-52 dispersed
Cone19ag1361 Cone-Chr19:9029175 Cone7ag0461 Cone-Chr7:2097555 3.80E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1361 K00799 - mdm:103433530 264.233