Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1373 ATGATTGTTTCCATGGACTTGAATGCCTCACCAGTACCTGAAGAGGATGAAGAGACTTTTGAAAGGCATATGGATGAGTACAATGCTAGAGATGAACGAATAGAAACAGGAGCTGATATAGCACGGCGGGAACGAGATGAGAGGCGTAAAAGAATGAGAAGAGAACGCCCTGACGAGAGACCAGTATTTGTATCTCAACCACTCACTTACGATGATTTCTATCCAACAAAGAAGCCCAATGATAGAAACAAGCTCCCTCCAGGTTGGTTGGATTGTCCTGCATTTGGTCAGGAAATATGTTGCATGATTCCTTCTAAGGTTCCTCTTGATGAGACATTCAATGAACATATTGTCCCTGGTAAAAGATACTCATTTAAGCAAGTGATCCATCAACAGAGAGTTTTAGGGAGAAAGCTTGGTTTGGTGATAGACTTGACAAATACCACTCGTTACTATACCCATTCAGAATTCAGGAAAGAGGGTATCAAGCATGTTAAGATTCAATGCAAAGGGAGGGACTCTGTTCCTGACAATCCTTCTGTAAATAAGTTTGTGTATGAGGTCACTCAGTTTCTCTCACGTCAAAAACACTCAAAGAAGTATATCCTTGTCCATTGCACGCACGGGCATAATCGCACAGGATATATGATTGTTCATTATCTTATGCGATCCCAGTCAATTTCTGTGACCCAGGCCATAAGAATATTTTCCGATGCGCGTCCTCCTGGAATCTACAAGCCTGACTACATTGATGCACTATATGCCTTTTATCACGAAAGAAAACCTGAAGCAGTTGTTTGCCCGCCAACTCCAGAGTGGAAGAGATCTTCTGATCTTGATCTCAATGGTGAAGCAGTGCCAGATGATGACGATGATGGAGGTTCTGCTGCTCCTGTTCATCCTTCCCAGGAGAATCACGAAGCAGACGTGGTTATGACAAATGATGATGTTTTGGGAGATGATATTCCTGATGATCAGCGAGAAGCTTTCCGACTCTTTTGTTATCAAATGCTTAAGTTGGGGACTGGGGTAAGAGGAAACTCTCAATTCCCTGGGTCACACCCGGTTTCTCTCAACAGGGACAACTTACAACTGTTAAGGCAGCGGTATTATTATGCGACATGGAAAGCTGATGGAACTCGTTATATGATGCTAATAACCATGGATGGATGTTACTTGGTCGATAGAACTTTCAACTTCCGAAGGGTGCAAATGAGGTTCCCCTGCAGAAATACTAATGATGGTCTAGGTGAGAAGACTCACCACTACACATTGCTTGATGGGGAGATGATAATAGATAATCTGCCCGACTCGAACAAGCAAGAAAGAAGATATCTGATATATGACATGATGGCAATCAACTCTGTCTCTATCATTGAGCGGCCTTTCTGTGAACGGTGGAAAATGCTCGAGAAAGAAGTGATTGAACCTAGAAACATTGAGCGCCACAATATTTACCAGAGTAGGAATCCTCATTATAGATATGATCTGGAGCCATTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTGCAGTTCCCAAGGTTTTAAAGGAATTCATCCCCCGGCTTTCACATGATGCAGATGGTCTAATATTCCAGGGATGGGATGATCCTTATGTTCCCCGCACACATGAAGGTCTTCTGAAGTGGAAATATCCTGAAATGAACTCAGTTGACTTTTTATTCGAGGTAACCGATGATGATCGTCAGCTACTATTTCTTCATGAACGAGGAAAGAAAAAATTAATGGACGGAAATAAAGTTGTATTCAAAGACGGTTCGGATCCCTCTTTCCATTCGGGGAAGATTATTGAGTGCTCTTGGGGTGCTGAAGAACAAGAATGGGTTTACATGCGAGGGAGGCTAGACAAATTTACACCCAATGAATTTAATACTTATAAAAAGGTGATGCGAAGCATAAGAGACAATATCACAGAGGACATTTTGTTAGGTGAGATTCATGAGATTATTTGCTTGCCTATGTATGCTGATCGGATAAGGAACGATAGCAAGGCTCACCAGCATACAAATAATTCAGCACGGCGTAAGTAA 2055 42.24 MIVSMDLNASPVPEEDEETFERHMDEYNARDERIETGADIARRERDERRKRMRRERPDERPVFVSQPLTYDDFYPTKKPNDRNKLPPGWLDCPAFGQEICCMIPSKVPLDETFNEHIVPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTTRYYTHSEFRKEGIKHVKIQCKGRDSVPDNPSVNKFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHYLMRSQSISVTQAIRIFSDARPPGIYKPDYIDALYAFYHERKPEAVVCPPTPEWKRSSDLDLNGEAVPDDDDDGGSAAPVHPSQENHEADVVMTNDDVLGDDIPDDQREAFRLFCYQMLKLGTGVRGNSQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLVDRTFNFRRVQMRFPCRNTNDGLGEKTHHYTLLDGEMIIDNLPDSNKQERRYLIYDMMAINSVSIIERPFCERWKMLEKEVIEPRNIERHNIYQSRNPHYRYDLEPFRVRRKDFWLLSAVPKVLKEFIPRLSHDADGLIFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFEVTDDDRQLLFLHERGKKKLMDGNKVVFKDGSDPSFHSGKIIECSWGAEEQEWVYMRGRLDKFTPNEFNTYKKVMRSIRDNITEDILLGEIHEIICLPMYADRIRNDSKAHQHTNNSARRK 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9078101 9085037 + Conep19aG0141000.1 Cone19ag1373 459810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1373 684 PANTHER MRNA-CAPPING ENZYME 77 651 IPR051029 GO:0004484(PANTHER)|GO:0006370(PANTHER)
Cone19ag1373 684 Pfam Dual specificity phosphatase, catalytic domain 137 257 IPR000340 GO:0016311(InterPro)
Cone19ag1373 684 MobiDBLite consensus disorder prediction 15 61 - -
Cone19ag1373 684 SMART dsp_5 119 259 IPR020422 GO:0006470(InterPro)
Cone19ag1373 684 PIRSF mRNA_capping_HCE 74 684 IPR017074 GO:0004484(InterPro)|GO:0006370(InterPro)|GO:0140818(InterPro)
Cone19ag1373 684 SUPERFAMILY Nucleic acid-binding proteins 555 668 IPR012340 -
Cone19ag1373 684 Gene3D DNA ligase/mRNA capping enzyme 313 552 - -
Cone19ag1373 684 MobiDBLite consensus disorder prediction 277 310 - -
Cone19ag1373 684 FunFam mRNA capping enzyme family protein 81 295 - -
Cone19ag1373 684 Gene3D Protein tyrosine phosphatase superfamily 81 293 IPR029021 -
Cone19ag1373 684 CDD Adenylation_mRNA_capping 325 553 IPR001339 GO:0004484(InterPro)|GO:0005524(InterPro)|GO:0006370(InterPro)
Cone19ag1373 684 ProSiteProfiles Dual specificity protein phosphatase domain profile. 107 263 IPR020422 GO:0006470(InterPro)
Cone19ag1373 684 FunFam mRNA capping enzyme, putative 313 550 - -
Cone19ag1373 684 ProSitePatterns Tyrosine specific protein phosphatases active site. 204 214 IPR016130 GO:0016311(InterPro)
Cone19ag1373 684 MobiDBLite consensus disorder prediction 1 61 - -
Cone19ag1373 684 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 84 274 IPR029021 -
Cone19ag1373 684 Gene3D - 553 645 IPR012340 -
Cone19ag1373 684 FunFam mRNA capping enzyme family protein 551 660 - -
Cone19ag1373 684 Pfam mRNA capping enzyme, catalytic domain 354 552 IPR001339 GO:0004484(InterPro)|GO:0005524(InterPro)|GO:0006370(InterPro)
Cone19ag1373 684 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 314 553 - -
Cone19ag1373 684 Pfam mRNA capping enzyme, C-terminal domain 591 651 IPR013846 -
Cone19ag1373 684 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 182 251 IPR000387 GO:0016311(InterPro)
Cone19ag1373 684 CDD RNA_5'-triphosphatase 88 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1383 Cone-Chr13:10039588 Cone19ag1373 Cone-Chr19:9078101 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1373 K13917 - gmx:100776633 1088.56