Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1380 ATGATACGCTTCTCCTTGTTAGTTCTACTATTTGTTGGTATCACATCAACTTCGGCGCAGTTGTCTCCTACTTTTTACTCCAAGTCATGTACTAATGCCGTTGCCACCATCAAATCGGCAATCAACTCTGCTGTGTCAAAAGAGGCGCGCATGGGAGCTTCTTTGCTCCGCCTTCATTTCCACGACTGCTTCGTTAATGGATGTGATGCTTCCGTATTGTTGGATGACACATCGAATTTCAAAGGAGAGCAAATGGCAGGTCCAAATGCAAACTCGCTGAGAGGACTTGATGTGATCGATACAATCAAAGCGCAGCTCGAGCGTATATGTCCAGGTGTTGTTTCTTGTGCTGACATCTTAACATTGGCTGCTAGAGACTCTGTGGTTGCATTGGGCGGACCAAGTTGGGCAGTGCCACTGGGTAGAAGAGACTCGACCACTGCAAACTTTAGCGATGCTAACACCAACATCCCCTCTCCTGCTTCGTCTCTAAGTGCTCTCATCACTGCCTTCTCAAACAAAGGTTTTACAGCTAAAGAAATGGTCGCTCTCTCGGGATCGCACACGATCGGACAGGCAAAGTGCTCATCCTTCAAGCAAAGACTGTACGTGGAAACCAACATAAACGCTTATTATGCGAAGACTTTGAAAGTTAATTGCCCAAGAACTGGAGGTGACACCAACTTATCACCTCTGGACGTAACCAGTTCGAATTCCTTCGATAACGCATACTTCAAGAACTTACTGACCAAAAGAGGCCTCTTGCACACTGACCAGGTGCTCTTCAATGGCAGCTCCACAGACTCTCAAGTCAGAGCTTATAGCACCAATTTGACCCGTTTTCGAACAGACTTCGCCAATGCTATGATGAAGATGGGGAATCTAAGTCCACTTACGGGAACTAGTGGTCAGATTAGAACCAACTGTGGAAAGACCAACTGA 942 46.5 MIRFSLLVLLFVGITSTSAQLSPTFYSKSCTNAVATIKSAINSAVSKEARMGASLLRLHFHDCFVNGCDASVLLDDTSNFKGEQMAGPNANSLRGLDVIDTIKAQLERICPGVVSCADILTLAARDSVVALGGPSWAVPLGRRDSTTANFSDANTNIPSPASSLSALITAFSNKGFTAKEMVALSGSHTIGQAKCSSFKQRLYVETNINAYYAKTLKVNCPRTGGDTNLSPLDVTSSNSFDNAYFKNLLTKRGLLHTDQVLFNGSSTDSQVRAYSTNLTRFRTDFANAMMKMGNLSPLTGTSGQIRTNCGKTN 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9120645 9121888 + Conep19aG0141700.1 Cone19ag1380 459817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1380 313 PANTHER PEROXIDASE 72-RELATED 10 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 Gene3D Peroxidase, domain 2 158 292 - -
Cone19ag1380 313 CDD secretory_peroxidase 20 312 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone19ag1380 313 Gene3D - 24 309 - -
Cone19ag1380 313 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Cone19ag1380 313 FunFam Peroxidase 24 165 - -
Cone19ag1380 313 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601(InterPro)
Cone19ag1380 313 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 PRINTS Plant peroxidase signature 247 264 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 PRINTS Plant peroxidase signature 231 246 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 SUPERFAMILY Heme-dependent peroxidases 20 313 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 ProSiteProfiles Plant heme peroxidase family profile. 20 313 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 Pfam Peroxidase 38 277 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 PRINTS Haem peroxidase superfamily signature 233 248 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag1380 313 FunFam Peroxidase 158 292 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1380 Cone-Chr19:9120645 Cone3ag0465 Cone-Chr3:2252239 6.48E-178 dispersed
Cone19ag1380 Cone-Chr19:9120645 Cone10ag0434 Cone-Chr10:2017359 1.18E-180 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1380 K00430 - mdm:103433738 459.914