Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1413 ATGCTAGAAGAATCTGTGTCCAGAGGCAATGAGGAACAAGCAAACCCCATCGTGGTGATATTAGTAGGTGCATCAGGTAGTGGAAAGTCCACTTTTTGTGATAACGTCATGCGCTCCTCTTCCCGCCCTTGGGCGCGAATATGCCAGGACAGTATTGGAAATGGTAAGGCTGGAACCAAAACTCAGTGCCTGAAGAGTGCGGCCGATGCATTGAAAGATGGGAAAAGTGTTTTTATTGATAGGTGCAATTTAGACAGAGAACAGCGTTCCGATTTTGTGAAGCTTGGTGAATCCCAAGTAGACGTGCATGCTGTAGTACTTGATCATCCTGTAAAGCTTTGTATATCAAGATCCGTTAAACGAACTGGTCGTGAAGGAAACTTAGAAGGTGGGAAGGCAGCAGCAGTTGTGAACAGGTTGCTGCAAAAGAAAGAGTTGCCGGAACTAAATGAAGGCTTTGCTCAGATAACTTACTGCCATAATGATACTGATGTTCAATTTGCTCTTGATACTTACACTGCACTTGGACCTCAAGATACTCTTCCACATTGTTGTATTGGACAGAAGATTCCTCCGGATTCTAAAAGGCAACATAGCATTATGAAGTTCTTAATGAAAGCGGATCATCCTGTTAATACAGCATCTAATGCTGATATTCTTAAGGTTTCTGCTAGTCGCCAAACTAGTGGAAAAAGGGTTGGAAAATCAGAGACTGCTTCTTCAGCCCCATTAACCAACAAGGCCAAACAGAAAGGTGAAGAGCCAGTGTTAGACTCTGTAGGTCGGGACGTTTCTTTGAATGATACTCCCATTCTTGCATTTCCTTCTATATCAACAGCAGACTTCCAATTCAACCTTGAAAAAGCATCTGAGGTTATCGTTGTGGAAGTTGAGAAATTTGTGAGTAAGCTTGGAAATGCTAGGCTTATATTAGTAGACTTGAGTCATGGGTCAAAGATCTTGTCTTTGGTCAAGGCTAAAGCTGCTCAGAGAAACATTGACTCCAACAGGTTCTCTACATTTTTTGGAGACATAACTCGACTTTGTGCTGAAGGTGGCTTGCGCTGCAATGTAATAGCCAATGCTGCTAACTGGCGACTCAAACCAGGAGGTGGAGGTGTGAGTGCTGCAATTTATAGTGCTGCTGGTCCTTCCCTAGAGGTGGCAACCAAGGAACGAGTTAACTTCCTTTGCCCAGGCAAAGAGGCATTGATCTTTCATTCGACGCCTAATGACTTTAGATTAGAAGCCGAGACATCACCATGTTGA 1269 43.58 MLEESVSRGNEEQANPIVVILVGASGSGKSTFCDNVMRSSSRPWARICQDSIGNGKAGTKTQCLKSAADALKDGKSVFIDRCNLDREQRSDFVKLGESQVDVHAVVLDHPVKLCISRSVKRTGREGNLEGGKAAAVVNRLLQKKELPELNEGFAQITYCHNDTDVQFALDTYTALGPQDTLPHCCIGQKIPPDSKRQHSIMKFLMKADHPVNTASNADILKVSASRQTSGKRVGKSETASSAPLTNKAKQKGEEPVLDSVGRDVSLNDTPILAFPSISTADFQFNLEKASEVIVVEVEKFVSKLGNARLILVDLSHGSKILSLVKAKAAQRNIDSNRFSTFFGDITRLCAEGGLRCNVIANAANWRLKPGGGGVSAAIYSAAGPSLEVATKERVNFLCPGKEALIFHSTPNDFRLEAETSPC 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9242581 9245706 - Conep19aG0145000.1 Cone19ag1413 459850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1413 422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 158 IPR027417 -
Cone19ag1413 422 ProSiteProfiles Macro domain profile. 325 422 IPR002589 -
Cone19ag1413 422 PANTHER APRATAXIN-RELATED 79 403 - GO:0000012(PANTHER)|GO:0003697(PANTHER)|GO:0003725(PANTHER)|GO:0005634(PANTHER)|GO:0030983(PANTHER)|GO:0033699(PANTHER)|GO:1990165(PANTHER)
Cone19ag1413 422 MobiDBLite consensus disorder prediction 225 247 - -
Cone19ag1413 422 SUPERFAMILY Macro domain-like 332 397 IPR043472 -
Cone19ag1413 422 Gene3D - 3 170 IPR027417 -
Cone19ag1413 422 Pfam AAA domain 18 128 - -
Cone19ag1413 422 Gene3D Leucine Aminopeptidase, subunit E, domain 1 313 415 IPR043472 -
Cone19ag1413 422 FunFam Transcription factor bHLH140 5 174 - -
Cone19ag1413 422 MobiDBLite consensus disorder prediction 225 261 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1418 Cone-Chr13:10200897 Cone19ag1413 Cone-Chr19:9242581 1.13E-245 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1413 K10863 - vvi:100259037 512.301