Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone19ag1420 | ATGGGCATCCATCATCATGCACCTGCAGCTTCTTTAGCTTGTCTTATTTTCTTGCTCTCTTTCCCTCTTTCCAATTCCCAGATCTCATTCGTATACCAAGGATTCAAAGACAAAGACCTCATTCTTGAAGAAGCTTCCATCATCAAGGAAACTGGCTTGTTACGTCTCACTAACTCATCACAAAACGTCATAGGCCATGCGTTTTATCCAGACCCCATCCAACTGTTCGATAGAAGTTCTCAACCAAATCCGAACGCTTCTTCCTTCAGCACGGATTTTGTTTTCGCCATAGTCAAATCAAGCTCAAGCTCTAATGGATATGGCCTCGCCTTCACTCTAGCACCTTCCACACAATTCCCAGGTGCAGGGTCGGAACACTTTCTTGGATTATTCAACTCCTCAAATGACGGCCATGCTTCCAACCATATTTTTGCCGTAGAATTCGATACGGTGAAGGGTTACAATGAAAAAATTGACAGTGCAGGGAATCATGTTGGAATCAACATCAATAGCATGGAGTCCAAGTTTTCATCAGTCGCTAGATATTACGTAAATGGACCTGACAAGGAAGAAGAAATCGAACTGGAAAGTGGAAATCCTATCCGTGCTTGGATTGACTATGATGGTGTAAATAAAACCATAAATGTTACAATTGCTCCCTTAAACATAGACAAACCGAGCACAGCTCTTCTTTCTCAGCCACTTGATTTAACTCCCGATCTTACTGATAAAATGTACGTTGGATTTTCTTCCTCGACTGGAAAAAAAACAAGCTCTCATTATATTTTGGGATGGAGTTTTGCTATCAATAAATCAGCACAACCACTTAATACATCTGACCTTCCTCCAGTGCCCAAACCGAAAAGTTCGTCCAATTACAACCCCGACATTGTAGCTCTTTTAGGTGCTTTATCTGCCCTTGCTTTGGTTGGAATTATTCTCCTTGTCATATTGTTTAGAAGGATGCAGGCTACGAAGGAAGAAAGCCTCGAGCAATGGGAGTTAGACTGTCCCCATAGGTTCAGCTACAAAGATCTCTTCAAAGCCACCAATGGTTTTAAAGATTCCGAGATTATTGGAGTGGGTGGGTTTGGTGCAGTTTACAAAGGTGTATTACGCTCTTCTGGGTCTGAAGTTGCAGTTAAGAAGGTGACAAGAAATTCAGCCCAAGGAGTGAGAGAATTTGCGGCAGAGATTGAAAGCTTGGGAAGATTAAGGCACAAGAATTTGGTCAATCTACAAGGATGGTGCAAGAAAAAGAATGACCTCCTCATAGTTTACGATTACATTCCGAACGGAAGCCTTGATTCCCTTCTTTACCACCCGAAAAACAACTTTACATTGAATTGGGAACAGAGGTTTGTTATAATCAAGGGCATTGCTTCCGGGTTATTGTATTTACATGAAGAATGGGAACAAGTTGTGATCCATAGAGACATAAAGCCGAGCAATGTCTTGATAGATGGCGAGATGAATGCTCGATTAGGTGATTTTGGCCTAGCTAGACTGTATGACCATGACGATACATCTCATACGACTCATATTGTGGGGACCCTTGGGTATATAGCCCCCGAATTGGCTCGACACGGAAAGGTCTCAAGATGTAGTGATGTGTTTGCTTTCGGAGTCTTGCTTCTTGAAGTTGCAACTGGAAGAAAGCCATTGATGAACTCGAATCAGCTTGGGGTGGATTGGGTGATGGAATGTCATCAAATGGGTAGAGTTCTTGAGACTGCTGATCCGAAGTTGAATTCGGTATATGATGTTGAAGAGATGCAGTTAGTATTGGTTTTGGGTCTTCTTTGTTCTCATCAGAAACCAGAATCTAGACCGACTACAAGGCAAATTATTAGATTCCTACATGGGGATGAATCTCTTCCTCCTGTTGATAACTGGATGATGGATTCTGAAAGGTCCAATTCGAACTCAAGTTTCTTCATTGAAGTTATCTCGGATAATCCGAATTCAAGATCGTTTCCTTCCTCATCTACTGGTCCCTTCTCTTCTAATTCTATGGAAAATGGCAGATAG | 2031 | 41.95 | MGIHHHAPAASLACLIFLLSFPLSNSQISFVYQGFKDKDLILEEASIIKETGLLRLTNSSQNVIGHAFYPDPIQLFDRSSQPNPNASSFSTDFVFAIVKSSSSSNGYGLAFTLAPSTQFPGAGSEHFLGLFNSSNDGHASNHIFAVEFDTVKGYNEKIDSAGNHVGININSMESKFSSVARYYVNGPDKEEEIELESGNPIRAWIDYDGVNKTINVTIAPLNIDKPSTALLSQPLDLTPDLTDKMYVGFSSSTGKKTSSHYILGWSFAINKSAQPLNTSDLPPVPKPKSSSNYNPDIVALLGALSALALVGIILLVILFRRMQATKEESLEQWELDCPHRFSYKDLFKATNGFKDSEIIGVGGFGAVYKGVLRSSGSEVAVKKVTRNSAQGVREFAAEIESLGRLRHKNLVNLQGWCKKKNDLLIVYDYIPNGSLDSLLYHPKNNFTLNWEQRFVIIKGIASGLLYLHEEWEQVVIHRDIKPSNVLIDGEMNARLGDFGLARLYDHDDTSHTTHIVGTLGYIAPELARHGKVSRCSDVFAFGVLLLEVATGRKPLMNSNQLGVDWVMECHQMGRVLETADPKLNSVYDVEEMQLVLVLGLLCSHQKPESRPTTRQIIRFLHGDESLPPVDNWMMDSERSNSNSSFFIEVISDNPNSRSFPSSSTGPFSSNSMENGR | 676 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 9274178 | 9276208 | - | Conep19aG0145800.1 | Cone19ag1420 | 459857 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone19ag1420 | 676 | Gene3D | Phosphorylase Kinase; domain 1 | 338 | 429 | - | - | |
Cone19ag1420 | 676 | FunFam | Lectin-domain containing receptor kinase VI.3 | 338 | 429 | - | - | |
Cone19ag1420 | 676 | SMART | serkin_6 | 353 | 620 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone19ag1420 | 676 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 475 | 487 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag1420 | 676 | Pfam | Legume lectin domain | 28 | 281 | IPR001220 | GO:0030246(InterPro) | |
Cone19ag1420 | 676 | Gene3D | - | 25 | 280 | - | - | |
Cone19ag1420 | 676 | FunFam | L-type lectin-domain containing receptor kinase S.4 | 430 | 632 | - | - | |
Cone19ag1420 | 676 | Gene3D | Transferase(Phosphotransferase) domain 1 | 430 | 628 | - | - | |
Cone19ag1420 | 676 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 28 | 287 | IPR013320 | - | |
Cone19ag1420 | 676 | CDD | lectin_legume_LecRK_Arcelin_ConA | 28 | 270 | IPR001220 | GO:0030246(InterPro) | |
Cone19ag1420 | 676 | CDD | STKc_IRAK | 359 | 620 | - | - | |
Cone19ag1420 | 676 | Pfam | Protein kinase domain | 354 | 617 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone19ag1420 | 676 | PANTHER | - | 39 | 634 | IPR050528 | GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER) | |
Cone19ag1420 | 676 | ProSitePatterns | Protein kinases ATP-binding region signature. | 359 | 383 | IPR017441 | GO:0005524(InterPro) | |
Cone19ag1420 | 676 | FunFam | L-type lectin-domain containing receptor kinase V.9 | 26 | 275 | - | - | |
Cone19ag1420 | 676 | MobiDBLite | consensus disorder prediction | 653 | 676 | - | - | |
Cone19ag1420 | 676 | SUPERFAMILY | Protein kinase-like (PK-like) | 337 | 633 | IPR011009 | - | |
Cone19ag1420 | 676 | ProSiteProfiles | Protein kinase domain profile. | 353 | 626 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone18ag0439 | Cone-Chr18:2140102 | Cone19ag1420 | Cone-Chr19:9274178 | 1.05E-189 | dispersed | |
Cone19ag1343 | Cone-Chr19:8943281 | Cone19ag1420 | Cone-Chr19:9274178 | 1.38E-187 | dispersed | |
Cone19ag1420 | Cone-Chr19:9274178 | Cone1ag0165 | Cone-Chr1:923247 | 3.38E-145 | dispersed | |
Cone19ag1420 | Cone-Chr19:9274178 | Cone10ag0326 | Cone-Chr10:1536026 | 3.76E-200 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82428 | PF00076 | RRM_1 | 6.90E-07 | CL0221 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone19ag1420 | - | - | - | 0.0 |