Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1420 ATGGGCATCCATCATCATGCACCTGCAGCTTCTTTAGCTTGTCTTATTTTCTTGCTCTCTTTCCCTCTTTCCAATTCCCAGATCTCATTCGTATACCAAGGATTCAAAGACAAAGACCTCATTCTTGAAGAAGCTTCCATCATCAAGGAAACTGGCTTGTTACGTCTCACTAACTCATCACAAAACGTCATAGGCCATGCGTTTTATCCAGACCCCATCCAACTGTTCGATAGAAGTTCTCAACCAAATCCGAACGCTTCTTCCTTCAGCACGGATTTTGTTTTCGCCATAGTCAAATCAAGCTCAAGCTCTAATGGATATGGCCTCGCCTTCACTCTAGCACCTTCCACACAATTCCCAGGTGCAGGGTCGGAACACTTTCTTGGATTATTCAACTCCTCAAATGACGGCCATGCTTCCAACCATATTTTTGCCGTAGAATTCGATACGGTGAAGGGTTACAATGAAAAAATTGACAGTGCAGGGAATCATGTTGGAATCAACATCAATAGCATGGAGTCCAAGTTTTCATCAGTCGCTAGATATTACGTAAATGGACCTGACAAGGAAGAAGAAATCGAACTGGAAAGTGGAAATCCTATCCGTGCTTGGATTGACTATGATGGTGTAAATAAAACCATAAATGTTACAATTGCTCCCTTAAACATAGACAAACCGAGCACAGCTCTTCTTTCTCAGCCACTTGATTTAACTCCCGATCTTACTGATAAAATGTACGTTGGATTTTCTTCCTCGACTGGAAAAAAAACAAGCTCTCATTATATTTTGGGATGGAGTTTTGCTATCAATAAATCAGCACAACCACTTAATACATCTGACCTTCCTCCAGTGCCCAAACCGAAAAGTTCGTCCAATTACAACCCCGACATTGTAGCTCTTTTAGGTGCTTTATCTGCCCTTGCTTTGGTTGGAATTATTCTCCTTGTCATATTGTTTAGAAGGATGCAGGCTACGAAGGAAGAAAGCCTCGAGCAATGGGAGTTAGACTGTCCCCATAGGTTCAGCTACAAAGATCTCTTCAAAGCCACCAATGGTTTTAAAGATTCCGAGATTATTGGAGTGGGTGGGTTTGGTGCAGTTTACAAAGGTGTATTACGCTCTTCTGGGTCTGAAGTTGCAGTTAAGAAGGTGACAAGAAATTCAGCCCAAGGAGTGAGAGAATTTGCGGCAGAGATTGAAAGCTTGGGAAGATTAAGGCACAAGAATTTGGTCAATCTACAAGGATGGTGCAAGAAAAAGAATGACCTCCTCATAGTTTACGATTACATTCCGAACGGAAGCCTTGATTCCCTTCTTTACCACCCGAAAAACAACTTTACATTGAATTGGGAACAGAGGTTTGTTATAATCAAGGGCATTGCTTCCGGGTTATTGTATTTACATGAAGAATGGGAACAAGTTGTGATCCATAGAGACATAAAGCCGAGCAATGTCTTGATAGATGGCGAGATGAATGCTCGATTAGGTGATTTTGGCCTAGCTAGACTGTATGACCATGACGATACATCTCATACGACTCATATTGTGGGGACCCTTGGGTATATAGCCCCCGAATTGGCTCGACACGGAAAGGTCTCAAGATGTAGTGATGTGTTTGCTTTCGGAGTCTTGCTTCTTGAAGTTGCAACTGGAAGAAAGCCATTGATGAACTCGAATCAGCTTGGGGTGGATTGGGTGATGGAATGTCATCAAATGGGTAGAGTTCTTGAGACTGCTGATCCGAAGTTGAATTCGGTATATGATGTTGAAGAGATGCAGTTAGTATTGGTTTTGGGTCTTCTTTGTTCTCATCAGAAACCAGAATCTAGACCGACTACAAGGCAAATTATTAGATTCCTACATGGGGATGAATCTCTTCCTCCTGTTGATAACTGGATGATGGATTCTGAAAGGTCCAATTCGAACTCAAGTTTCTTCATTGAAGTTATCTCGGATAATCCGAATTCAAGATCGTTTCCTTCCTCATCTACTGGTCCCTTCTCTTCTAATTCTATGGAAAATGGCAGATAG 2031 41.95 MGIHHHAPAASLACLIFLLSFPLSNSQISFVYQGFKDKDLILEEASIIKETGLLRLTNSSQNVIGHAFYPDPIQLFDRSSQPNPNASSFSTDFVFAIVKSSSSSNGYGLAFTLAPSTQFPGAGSEHFLGLFNSSNDGHASNHIFAVEFDTVKGYNEKIDSAGNHVGININSMESKFSSVARYYVNGPDKEEEIELESGNPIRAWIDYDGVNKTINVTIAPLNIDKPSTALLSQPLDLTPDLTDKMYVGFSSSTGKKTSSHYILGWSFAINKSAQPLNTSDLPPVPKPKSSSNYNPDIVALLGALSALALVGIILLVILFRRMQATKEESLEQWELDCPHRFSYKDLFKATNGFKDSEIIGVGGFGAVYKGVLRSSGSEVAVKKVTRNSAQGVREFAAEIESLGRLRHKNLVNLQGWCKKKNDLLIVYDYIPNGSLDSLLYHPKNNFTLNWEQRFVIIKGIASGLLYLHEEWEQVVIHRDIKPSNVLIDGEMNARLGDFGLARLYDHDDTSHTTHIVGTLGYIAPELARHGKVSRCSDVFAFGVLLLEVATGRKPLMNSNQLGVDWVMECHQMGRVLETADPKLNSVYDVEEMQLVLVLGLLCSHQKPESRPTTRQIIRFLHGDESLPPVDNWMMDSERSNSNSSFFIEVISDNPNSRSFPSSSTGPFSSNSMENGR 676
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
19 9274178 9276208 - Conep19aG0145800.1 Cone19ag1420 459857
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1420 676 Gene3D Phosphorylase Kinase; domain 1 338 429 - -
Cone19ag1420 676 FunFam Lectin-domain containing receptor kinase VI.3 338 429 - -
Cone19ag1420 676 SMART serkin_6 353 620 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1420 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1420 676 Pfam Legume lectin domain 28 281 IPR001220 GO:0030246(InterPro)
Cone19ag1420 676 Gene3D - 25 280 - -
Cone19ag1420 676 FunFam L-type lectin-domain containing receptor kinase S.4 430 632 - -
Cone19ag1420 676 Gene3D Transferase(Phosphotransferase) domain 1 430 628 - -
Cone19ag1420 676 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 287 IPR013320 -
Cone19ag1420 676 CDD lectin_legume_LecRK_Arcelin_ConA 28 270 IPR001220 GO:0030246(InterPro)
Cone19ag1420 676 CDD STKc_IRAK 359 620 - -
Cone19ag1420 676 Pfam Protein kinase domain 354 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1420 676 PANTHER - 39 634 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Cone19ag1420 676 ProSitePatterns Protein kinases ATP-binding region signature. 359 383 IPR017441 GO:0005524(InterPro)
Cone19ag1420 676 FunFam L-type lectin-domain containing receptor kinase V.9 26 275 - -
Cone19ag1420 676 MobiDBLite consensus disorder prediction 653 676 - -
Cone19ag1420 676 SUPERFAMILY Protein kinase-like (PK-like) 337 633 IPR011009 -
Cone19ag1420 676 ProSiteProfiles Protein kinase domain profile. 353 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0439 Cone-Chr18:2140102 Cone19ag1420 Cone-Chr19:9274178 1.05E-189 dispersed
Cone19ag1343 Cone-Chr19:8943281 Cone19ag1420 Cone-Chr19:9274178 1.38E-187 dispersed
Cone19ag1420 Cone-Chr19:9274178 Cone1ag0165 Cone-Chr1:923247 3.38E-145 dispersed
Cone19ag1420 Cone-Chr19:9274178 Cone10ag0326 Cone-Chr10:1536026 3.76E-200 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82428 PF00076 RRM_1 6.90E-07 CL0221 Cone PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1420 - - - 0.0