Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1428 ATGGGTGCTTGTTGCACCAAAGATAGGTTTTATGGAGGAAGAAGATACACTCAGGAGAATGATGAAGATGTGAGGGAATGGAATGATAACTTTCATGAACAGGATGTCATCCAAGTTTCAAAGGAAGATGGTGGTGGCCTTATCAGATTGCATGGACCCTCTACATTCACCTCTATGTTCACCAAGAAAGGCAAGAAGGGAATCAATCAAGATGCCATGACTATCTGGGAGGATTTTACGGGCAATAAAGGTATGACGTTTTGCGGCGTGTTTGATGGTCACGGTCCTTCCGGACATATCGTTTCGCAGCAGATTCGAAACTCTTTACCCTCCAAGCTCTCTGAAGCAATCAGAATGTCTGGAATTGGCCGTGGCGGCAGTGAATCATGTAAAGATAATAATATGGACAATAAGGAATTTCTGTCTTTATGGGAAGCAAATTTTGTTCGTTCATTTGAGGAAATGGATGAAGAATTACGGCATGATTCCAGTATTGATTCCTATTGTAGCGGTACAACAGCCGTTACTGCAGTTAAACAGGGTGAACACTTGATAATTGCTAACCTGGGTGATTCTCGCGCTGTTCTTTGTACTAGAGGAGACAGAAATCAACTTCTTCCTGTTCAACTCACAGTTGACTTGAAACCTGATGTTGCATATGAAGCTGAAAGGATAAAGTGTTGTCAAGGGAGAATCTTAGCAGATACTGAAGAGCCTGATGTTTACAGAATATGGATGCCAGAAGAAGATTATCCAGGTCTTGCTATGGCTAGAGCGTTTGGTGATTTTTGCCTCAAAGATCATGGCCTTATCGCTACTCCTCAAGTTTCTTACAAACGTATCACAAGCAAGGATGAATTCGTTGTCTTAGCAACTGATGGGGTATGGGACGTGCTTACAAACGCAGAGGTAATTAAGACAGTAGCATGTGCAGAGAAGCAATCCATGGCAGCTAAACTTGTAGCGATGCGTGCTGTCAATACATGGAAGCGCAAATATCCCGGGTCGACTATTGATGATTGCGCGGTTATTTGCTTGTTCCTCAAGGGCCAAACAAATCCGACGTCAGGAAATTTGCTAAGAGCTGTTTCACAGCGATTCGGATGCAATAGAAATGAGGGAAAGGACTGCACATATTATTCCAAGGTAGAAGGGAATAATAGTAATAATAATGTTTCTCCAGAAAGAATCGGTAGAGTGGACACTATCACCATGTTCAAGCTTCCCAGATTTCTTCGAGTTTTCAGCAACCAGAGAACGTTGCAGAATTTCGACAAAAGGGATAATCATTAG 1293 42.38 MGACCTKDRFYGGRRYTQENDEDVREWNDNFHEQDVIQVSKEDGGGLIRLHGPSTFTSMFTKKGKKGINQDAMTIWEDFTGNKGMTFCGVFDGHGPSGHIVSQQIRNSLPSKLSEAIRMSGIGRGGSESCKDNNMDNKEFLSLWEANFVRSFEEMDEELRHDSSIDSYCSGTTAVTAVKQGEHLIIANLGDSRAVLCTRGDRNQLLPVQLTVDLKPDVAYEAERIKCCQGRILADTEEPDVYRIWMPEEDYPGLAMARAFGDFCLKDHGLIATPQVSYKRITSKDEFVVLATDGVWDVLTNAEVIKTVACAEKQSMAAKLVAMRAVNTWKRKYPGSTIDDCAVICLFLKGQTNPTSGNLLRAVSQRFGCNRNEGKDCTYYSKVEGNNSNNNVSPERIGRVDTITMFKLPRFLRVFSNQRTLQNFDKRDNH 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9298017 9299675 - Conep19aG0146800.1 Cone19ag1428 459865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1428 430 Gene3D - 51 350 IPR036457 -
Cone19ag1428 430 PANTHER PROTEIN PHOSPHATASE 39 347 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone19ag1428 430 SMART PP2C_4 40 346 IPR001932 -
Cone19ag1428 430 CDD PP2Cc 58 348 IPR001932 -
Cone19ag1428 430 SUPERFAMILY PP2C-like 52 350 IPR036457 -
Cone19ag1428 430 ProSiteProfiles PPM-type phosphatase domain profile. 56 348 IPR001932 -
Cone19ag1428 430 Pfam Protein phosphatase 2C 137 320 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1428 Cone-Chr19:9298017 Cone1ag1702 Cone-Chr1:57974327 4.39E-110 dispersed
Cone13ag1431 Cone-Chr13:10263933 Cone19ag1428 Cone-Chr19:9298017 9.25E-103 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1428 - - - 0.0