Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1442 ATGTACAAGCAGCCGCTTTTAGAAGAAGATCACCGTATGGATGGAGCCAAGTCAAAGCTCAGATACGTTGAAACCGATCCGTCTGCTCGCTATGGACGTTTTAGAGAAATTCTGGGGAAGGGAGCGATGAAGACTGTTTACAAGGCTTTTGATGAGGTACTTGGAATGGAGGTAGCTTGGAACCAGGTAAAGCTAAAAGACGTATTTCATTCACCTGAGGAATTGCAGCGTCTTTATTCAGAGGTTCACCTTCTCAGCAGCCTCAAACACGACTCCCTCATACGATTCTATACCTCTTGGATTGATGTTTATCGAAGAACCTTCAATTTCATCACTGAATTCTTCACTTCTGGGACCCTCAGAGAGTACAGGCACAAGCATCGTAGAGTAGATATCCGGGCAGTCAAGAACTGGGCTCGTCAGATATTACATGGTTTGGTATATCTGCATGGACATGATCCGCCTGTCATACACAGAGACCTCAAGTGTGATAACATCTTCATCAATGGCCATCTTGGACAAGTCAAGATTGGTGATTTTGGATTGGCTGCCATCCTTCGTGGATCCCAACATGCCCACAGCGTCATAGGCACACCAGAATTCATGGCTCCTGAATTATATGAAGAGGACTACAACGAGCTAGTAGATGTATATTCTTTTGGAATGTGTGTGCTAGAGATGCTGACTTGCGAGTATCCATACAGCGAATGCTCCAATCCAGCCCAAATATACAAGAAAGTCGTTTCAGGAAAATTACCAGAAGCATTTTACCGGATCCAACACAAGGAGGCTCAGCAATTTGTGAAGAAATGCTTAGAGCCTGTTTCAAAGAGGTTGCCATCCCGAGATCTCTTGCTCGAACCTTTTTTAGCATCTGAGACTGAAGGAGAGTTATTATTGCCTCTGCCCTGCTTCTCAAGTGCTAGCGAATCAACAACGATGGTGAAGACAGTGCCATCTTCAATCTCGGATTTGACAAACACCACCAACATGACCATAACTGGAACAATGGATCTGGATGATGATACTATTTTTCTTAAAGTGCAGATAACTGACAAGGATGGCCGTACCAGGAACATATACTTCCCTTTCGACATTGTGAAGGACACTGCAATAGGTGTTGCAATGGAGATGGTGAAAGAACTCGAAATAAGTGATTGGGAACCATCCAAGATTGCTAGGATGATAGAGGAAGAAATATGGTGTTTGCTTCCTAGTTGGAAGCAGTGCGTATCACCCCTACAATATCACAAAGATGACGTTGAGGATGAGGACCAAGTTACCCACCAACCTTTCTACTCTCCCTCCCACTCCTCCTCCACTTCTGTTCCAACTTTCAACGAGGCTCTGCATTCTTTTCTGGGACAAGATTCAAGTTCCTACGTAGGTGATGATGCTGCTTCCTCTAGCTCTTTAAACTCCTTCCAGTACTCCAACATAAGTTACCACGAAGAGGATTACCAATTGAGTTGCAGGGGAGCAGGAGAGGCCCATTGCATCTCAAATTGTACAAGATTATGTCCCTCTCATAACCTTGATACATCACGGCATTCCAGGCAACCCAATGTGATGTTTGATTCCATGGGAAACTGTAGCTCGAAATACCCAAAAAGACTTGGAAGGATTAAGTCAATGGTGGATGTACGTAGGCAGTTATTGCATGGCTGTGTGTTGGAGGAGATAAGGAAGAGGCGGTTGTTCAAGACAGTTGGAGCGGTTGAGAACATTGGGTTTCAGGAACCAAGAGAGGCGGTTCCAGCCAAAACTGTGGGCTCAAGTGGGGACGTTTGTGGCGGGAAGCAATGA 1806 45.02 MYKQPLLEEDHRMDGAKSKLRYVETDPSARYGRFREILGKGAMKTVYKAFDEVLGMEVAWNQVKLKDVFHSPEELQRLYSEVHLLSSLKHDSLIRFYTSWIDVYRRTFNFITEFFTSGTLREYRHKHRRVDIRAVKNWARQILHGLVYLHGHDPPVIHRDLKCDNIFINGHLGQVKIGDFGLAAILRGSQHAHSVIGTPEFMAPELYEEDYNELVDVYSFGMCVLEMLTCEYPYSECSNPAQIYKKVVSGKLPEAFYRIQHKEAQQFVKKCLEPVSKRLPSRDLLLEPFLASETEGELLLPLPCFSSASESTTMVKTVPSSISDLTNTTNMTITGTMDLDDDTIFLKVQITDKDGRTRNIYFPFDIVKDTAIGVAMEMVKELEISDWEPSKIARMIEEEIWCLLPSWKQCVSPLQYHKDDVEDEDQVTHQPFYSPSHSSSTSVPTFNEALHSFLGQDSSSYVGDDAASSSSLNSFQYSNISYHEEDYQLSCRGAGEAHCISNCTRLCPSHNLDTSRHSRQPNVMFDSMGNCSSKYPKRLGRIKSMVDVRRQLLHGCVLEEIRKRRLFKTVGAVENIGFQEPREAVPAKTVGSSGDVCGGKQ 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9392454 9395511 - Conep19aG0148300.1 Cone19ag1442 459879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1442 601 Gene3D Transferase(Phosphotransferase) domain 1 115 297 - -
Cone19ag1442 601 FunFam probable serine/threonine-protein kinase WNK9 115 295 - -
Cone19ag1442 601 SUPERFAMILY Protein kinase-like (PK-like) 34 291 IPR011009 -
Cone19ag1442 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1442 601 Gene3D Phosphorylase Kinase; domain 1 16 113 - -
Cone19ag1442 601 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 18 488 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cone19ag1442 601 ProSiteProfiles Protein kinase domain profile. 32 290 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1442 601 Pfam Protein kinase domain 36 289 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1442 601 CDD STKc_WNK 30 290 - -
Cone19ag1442 601 FunFam Probable serine/threonine-protein kinase WNK1 16 113 - -
Cone19ag1442 601 SMART serkin_6 32 290 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1442 Cone-Chr19:9392454 Cone1ag0779 Cone-Chr1:53827788 2.11E-215 dispersed
Cone19ag1442 Cone-Chr19:9392454 Cone5ag1044 Cone-Chr5:4561701 8.59E-205 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82431 PF03080 Neprosin 1.40E-18 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1442 K08867 - cit:102622163 719.924