Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1445 ATGAGTTGCACCGAGAACAAGAGAGGAAGAGAGGAGACAGAGCATGATGAGTTGCCTCCTCCTAGGTCTCCTCAGTTAGAACCAAAACCTGTTACTCAGAATGGATCCATGACATCCTCCCCACCATTAACAATCGATGAAAATCTTCTTGTTGATCCCAAAATGTTGTTTATTGGGTCAAAAATCGGCGAGGGAGCTCATGGAAAAGTTTATCAAGGAAGATACCAGGATAAAATTGTTGCTATTAAAGTTCTCCATCGTGGGAGTAAACCTGAAGAAAGAGCTTCACTTGAAAATCGGTTTGCCCGAGAAGTCATTATGATGTCTCGAGTGACACATGAGAATCTTGTCAAGTTTATTGGCGCTTGTAAAGATCCTTTAATGGTGATAGTAACAGAGCTATTGCCAGGGATGTCTCTCCGGAAATACTTAGGTAGTATTCGCCCAAACCAACTAGACCTTCGTGTAGCTATTAACTACGCGCTGGATATTGCTCGTGCTATGGAGTGTCTACATGCCAATGGCATAATACATAGAGATCTGAAACCTGACAATTTATTACTTACCGAGCATCAAAAGTCTATGAAGCTTGCGGATTTTGGCCTTGCAAGAGAGGAATCTGTGACTGAAATGATGACTGCAGAAACTGGAACCTATCGTTGGATGGCTCCTGAGTTGTACAGCACTGTGACTTTGCGTCAGGGAGAGAAGAAACATTACAATAACAAGGTTGATGTATACAGCTTTGGAATTGTGTTATGGGAGCTTTTGACGAATCGCATGCCATTTGAAGGGATGTCAAATTTGCAGGCGGCATATGCTGCTGCTTTTAAGCAAGAGAGGCCGAGTGTTCCCGAGGATATATCTCCGGATCTAGCGTTTATCATACAGTCATGTTGGGTGGAGGATCCTAACATGAGGCCAAGCTTCAGCCAGATAATCCGCATGCTTAATGCTTTTCTGTTTACACTTCCTCCCCCTTCACCCTCCTGCTTAGAACTGCCATATTCTAACAGCACCGAGACAGCAGCTGCAGAAGCAACAAGTAGCGGAGCCATGACAGAGCTGTCTGCTCGTGGCAGAGGGAAGCTTGGTTTCTTTAGGCAACTCTTTTCTGTAAAGAGGACTAAAAACTCACAATGA 1143 44.09 MSCTENKRGREETEHDELPPPRSPQLEPKPVTQNGSMTSSPPLTIDENLLVDPKMLFIGSKIGEGAHGKVYQGRYQDKIVAIKVLHRGSKPEERASLENRFAREVIMMSRVTHENLVKFIGACKDPLMVIVTELLPGMSLRKYLGSIRPNQLDLRVAINYALDIARAMECLHANGIIHRDLKPDNLLLTEHQKSMKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSVPEDISPDLAFIIQSCWVEDPNMRPSFSQIIRMLNAFLFTLPPPSPSCLELPYSNSTETAAAEATSSGAMTELSARGRGKLGFFRQLFSVKRTKNSQ 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9410125 9413554 + Conep19aG0148600.1 Cone19ag1445 459882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1445 380 Gene3D Transferase(Phosphotransferase) domain 1 139 339 - -
Cone19ag1445 380 MobiDBLite consensus disorder prediction 1 44 - -
Cone19ag1445 380 CDD STKc_MAP3K-like 62 317 - -
Cone19ag1445 380 FunFam serine/threonine-protein kinase HT1 137 332 - -
Cone19ag1445 380 PRINTS Tyrosine kinase catalytic domain signature 170 188 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1445 380 PRINTS Tyrosine kinase catalytic domain signature 288 310 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1445 380 PRINTS Tyrosine kinase catalytic domain signature 132 145 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1445 380 PRINTS Tyrosine kinase catalytic domain signature 244 266 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1445 380 ProSiteProfiles Protein kinase domain profile. 56 321 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1445 380 SMART serkin_6 56 321 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1445 380 PANTHER SERINE-THREONINE PROTEIN KINASE 50 318 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone19ag1445 380 Gene3D Phosphorylase Kinase; domain 1 45 135 - -
Cone19ag1445 380 MobiDBLite consensus disorder prediction 28 44 - -
Cone19ag1445 380 Pfam Protein tyrosine and serine/threonine kinase 58 317 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1445 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1445 380 FunFam Kinase suppressor of Ras 1 45 135 - -
Cone19ag1445 380 ProSitePatterns Protein kinases ATP-binding region signature. 62 83 IPR017441 GO:0005524(InterPro)
Cone19ag1445 380 MobiDBLite consensus disorder prediction 1 22 - -
Cone19ag1445 380 SUPERFAMILY Protein kinase-like (PK-like) 49 342 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0166 Cone-Chr19:953893 Cone19ag1445 Cone-Chr19:9410125 1.92E-142 dispersed
Cone19ag1445 Cone-Chr19:9410125 Cone6ag1606 Cone-Chr6:12440854 1.01E-88 dispersed
Cone10ag0440 Cone-Chr10:2045302 Cone19ag1445 Cone-Chr19:9410125 3.05E-169 wgd
Cone13ag1446 Cone-Chr13:10362427 Cone19ag1445 Cone-Chr19:9410125 1.88E-103 wgd
Cone19ag1445 Cone-Chr19:9410125 Cone3ag0473 Cone-Chr3:2302328 8.36E-216 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82432 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1445 - - - 0.0