Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1457 ATGAACAGGTTAGAGAAATCCCGTGGCTGTGGTATCGCGATTTTCCTTTCCCTGCTTTTCCCAATTCATCTAGTTTTGGGGGATGACTATGTTGCGGCTGATAACATCCTCTTAAACTGTGGAGGACCCCAGCAAGGCAACGATCCCTACGGCCGCAAATGGACGTCCGATATCGGTTCCAAGTTTGCCTCGGCAGCCGGGACCTCCTCCACTTCTCAGGCTGCTAATCAGGACCCCTCTGTCACTCAAGTTCCTTTCATGACTGCTCGTGTTTTCCCCTCTAATTTCACCTACTCTTTTCCTGTTGCCTCTGGTCGCAAGTTTCTTCGTCTATACTTCTACCCTTCTTCTTATGCCGGACTCAATGCTTCTAATGCTCTTTTCTCCGTCACTGCCGAATCCTTCACTCTTCTTAAAAACTTCAGTGTTCTCCAGACCACACAAGCCCTCAACTACGCCTATATCATTAAGGAATACTCCCTCAATGTTGAAGATGGATCCTTGGACCTTACTTTCAACCCTTCTTCCACCTTCTCAGACTCATATGCATTTGTCAATGGGATCGAGGTCGTGTCCATGCCTGATATTTATAGTCCCACAGATGGAACAACCATGATTGTCGGTCAGACAAGTCCATTCATCATTGACAACGGCACTGCTCTGGAGAATGTTTATCGACTAAATGTAGGGGGAAATAATATCTTGCCACCGGCTGATACGGGGATGTTCAGGATGTGGGTTGATGACTCGGCTTTCCTCTTCGGGGCAGCTCTCGGAGTTGTGGTCACTACGGATCCGAACATCTCCATCAACTATCCATCTAATACGCCTACTTACATCGCTCCTGTTGACGTTTATTCCACTGCTAGGTCAATGGGGCCTACCACCTCTGTCAACCTAAATTACAACTTGACTTGGGTTTTCAGTATCGATTCTGGATTCTCCTATCTAGTTAGGCTCCATTTCTGTGAATTTAATGACATCATTACCAAGGTTAATCAAAGAGTGTTTCAGATCTTCCTCAACAATCAAACTGCAGAGGATGCAGCAGATGTTATTGCCTGGGCACAAGGGTACAATAAGGTCCCAGTGCATAAGGACTATGTCGTTCTTGTTCCCACCGGGGCCCCACAGCAGGATCTATGGCTCGCACTACATCCAAATCAGGCTTCAAAGTCGCAATATTATGATGCAATCTTGAATGGTGTGGAGATTTTCAAAATCAGTGATCCAAATGGCAACCTAGCAGGGAGTAATCCTGTTCCTACTCCTAAACAGGATGTGATTAACCCTCTGTTGGCACTACCATCGTCTGGTCACAGAAAATCAAGGAATCAAAAAGCAGTTATTGCTGGAGGTGTTAGTGCTGGAGTTGCTCTACTCCTCGTCCTAAGTTTGTTTGCCCTGGCTACTGTGCATTGCAGGAAGCATAAGGCCTCGAGGAGTACGAGTACTGAAGGGCCATCAGGCTGGCTCCCTCTCTCTTTGTATGGGAATTCACACTCTGCTGGTTCTGCAAAGACGAACACAACCAGAAGCCACACATCATCCCTCCCTTCCAACCTCTGCCGCCACTTCTCTTTTACTGAAGTTAAGGCTGCCACCAACAACTTCGACGAGTCTTTGCTCCTTGGAGTGGGAGGTTTTGGTAAGGTTTACAAGGGAGAAGTAGACGGTGGGACTACTAAAGTTGCTATCAAGCGTGGAAACCCACTCTCAGAGCAAGGTGTGCATGAGTTCCAAACTGAGATTGAAATGCTCTCAAAGCTTCGTCATCGCCACCTTGTTTCACTCATTGGCTACTGCGAAGAGAACTGTGAAATGATCCTTGTTTATGATTACATGGTGCATGGAACTCTACGCGAGCACCTATACAAGACCCAAAAGCCCCCCTTGCCATGGAAGCAGAGGCTTGAGATATGCATTGGTGCTGCACGTGGTTTGCATTATCTCCACACAGGTGCCAAGCATACGATTATTCACCGAGATGTCAAAACAACTAACATTCTTTTGGATGACAAGTGGGTAGCAAAGGTTGCAGATTTCGGGTTGTCAAAAACGGGTCCCACTTTGGACAACACACATGTGAGCACTGTTGTGAAGGGTAGCTTTGGATACTTGGACCCGGAATACTTTAGGCGGCAGCAGCTGACAGACAAGTCTGATGTTTACTCATTTGGGGTTGTTCTTTTTGAGGTGTTGTGTGCTCGGCCAGCCCTGAACCCGACCCTTCCAAAGGAGCAGGTGAGTTTGGCGGAGTGGGCTGCACATTGCCACAGGAAAGGGATTCTGGATCAGATGAGTGACCCTTACCTCAATGGGAAGATTGCCCCTGAATGCTTCAACAAGTTTGCAGAAACGGCCATGAAGTGTGTGGCGGATCAGGGCATTGAGAGGCCATCAATGGGGGATGTTTTGTGGAATCTAGAGTTTGCTTTGCAGCTGCAGGACAGTGCAGAGGAGAGTGGCAAGCTATGCAGTGGAATGGAGAGTGAGGAAGATTCCTGTAAGAAGGGGGACAAGGATGATCCAATGGCAGGGTTTGATGGTAATGTAACTGATTCCCGGAGCAGTGGAATGCTGAGTATGAGTGTAGGTGGTCGAAGCCTTGCCAGCGAAGAGTCTGATGGGTTGACTCCAAGTGCCGTGTTCTCACAGATAATGAATCCAAAGGGGCGCTGA 2682 47.84 MNRLEKSRGCGIAIFLSLLFPIHLVLGDDYVAADNILLNCGGPQQGNDPYGRKWTSDIGSKFASAAGTSSTSQAANQDPSVTQVPFMTARVFPSNFTYSFPVASGRKFLRLYFYPSSYAGLNASNALFSVTAESFTLLKNFSVLQTTQALNYAYIIKEYSLNVEDGSLDLTFNPSSTFSDSYAFVNGIEVVSMPDIYSPTDGTTMIVGQTSPFIIDNGTALENVYRLNVGGNNILPPADTGMFRMWVDDSAFLFGAALGVVVTTDPNISINYPSNTPTYIAPVDVYSTARSMGPTTSVNLNYNLTWVFSIDSGFSYLVRLHFCEFNDIITKVNQRVFQIFLNNQTAEDAADVIAWAQGYNKVPVHKDYVVLVPTGAPQQDLWLALHPNQASKSQYYDAILNGVEIFKISDPNGNLAGSNPVPTPKQDVINPLLALPSSGHRKSRNQKAVIAGGVSAGVALLLVLSLFALATVHCRKHKASRSTSTEGPSGWLPLSLYGNSHSAGSAKTNTTRSHTSSLPSNLCRHFSFTEVKAATNNFDESLLLGVGGFGKVYKGEVDGGTTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMVHGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDDKWVAKVADFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPALNPTLPKEQVSLAEWAAHCHRKGILDQMSDPYLNGKIAPECFNKFAETAMKCVADQGIERPSMGDVLWNLEFALQLQDSAEESGKLCSGMESEEDSCKKGDKDDPMAGFDGNVTDSRSSGMLSMSVGGRSLASEESDGLTPSAVFSQIMNPKGR 893
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9464268 9467585 - Conep19aG0149800.1 Cone19ag1457 459894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1457 893 FunFam Receptor-like protein kinase FERONIA 510 614 - -
Cone19ag1457 893 MobiDBLite consensus disorder prediction 851 886 - -
Cone19ag1457 893 CDD STKc_IRAK 544 810 - -
Cone19ag1457 893 SMART serkin_6 538 812 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1457 893 FunFam FERONIA receptor-like kinase 219 409 - -
Cone19ag1457 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 659 671 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1457 893 Gene3D Transferase(Phosphotransferase) domain 1 615 831 - -
Cone19ag1457 893 Gene3D - 220 409 - -
Cone19ag1457 893 Gene3D - 35 193 - -
Cone19ag1457 893 ProSiteProfiles Protein kinase domain profile. 538 812 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1457 893 FunFam Receptor-like protein kinase FERONIA 615 825 - -
Cone19ag1457 893 Pfam Malectin-like domain 38 408 IPR024788 -
Cone19ag1457 893 Pfam Protein tyrosine and serine/threonine kinase 544 806 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1457 893 FunFam FERONIA receptor-like kinase 35 194 - -
Cone19ag1457 893 SUPERFAMILY Protein kinase-like (PK-like) 511 812 IPR011009 -
Cone19ag1457 893 MobiDBLite consensus disorder prediction 823 893 - -
Cone19ag1457 893 MobiDBLite consensus disorder prediction 826 847 - -
Cone19ag1457 893 ProSitePatterns Protein kinases ATP-binding region signature. 544 567 IPR017441 GO:0005524(InterPro)
Cone19ag1457 893 Gene3D Phosphorylase Kinase; domain 1 499 614 - -
Cone19ag1457 893 PANTHER OS03G0124300 PROTEIN-RELATED 13 474 IPR045272 GO:0004714(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0664 Cone-Chr10:3227902 Cone19ag1457 Cone-Chr19:9464268 9.83E-297 dispersed
Cone18ag1142 Cone-Chr18:8226328 Cone19ag1457 Cone-Chr19:9464268 1.28E-257 dispersed
Cone18ag1143 Cone-Chr18:8231900 Cone19ag1457 Cone-Chr19:9464268 5.57E-227 dispersed
Cone19ag1457 Cone-Chr19:9464268 Cone3ag0691 Cone-Chr3:3533339 9.25E-292 dispersed
Cone10ag0450 Cone-Chr10:2090358 Cone19ag1457 Cone-Chr19:9464268 0 wgd
Cone19ag1457 Cone-Chr19:9464268 Cone3ag0483 Cone-Chr3:2361441 0 wgd
Cone19ag1457 Cone-Chr19:9464268 Cone5ag1032 Cone-Chr5:4499206 3.37E-70 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82435 PF00828 Ribosomal_L27A 1.00E-19 CL0588 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1457 - - - 0.0