Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1463 ATGGACAAGTACGAGAAGCTTGAGAAGGTAGGTGAAGGAACATACGGGAAGGTGTACAAGGCGAAGGACAAGGAGACTGGGCAGCTTGTTGCTCTCAAGAAGACGAGGCTAGAGATGGACGAAGAGGGAGTCCCTCCCACTGCTCTTCGTGAGGTCTCCCTGCTTCAGCTGCTTTCTCAGTCCCTCTACGTTGTCCGCCTCCTCTGTGTCGAGCACGTCCACCATCACAAGAGCGGTAAGCCCCTCCTCTACCTGGTTTTCGAGTTTCTTGACACCGATCTTAAAAAGTTCATCGACTCCCACCGCAAAGGCCCAAACCCTAGACCTCTCCCTCCCTCCCTTGTCCAGAGCTTTCTCTTCCAACTCTGCAAGGGCGTCGCACATTGTCACGGTCATGGGGTCCTCCACCGTGATCTCAAACCACAGAACCTCCTCCTCGATCAGGACAAGGGAATTCTCAAGATTGCTGACCTTGGCTTAGGCCGCGCCTTCACTATCCCTCTCAAGAGCTACACCCACGAGATTGTCACTCTCTAG 537 54.0 MDKYEKLEKVGEGTYGKVYKAKDKETGQLVALKKTRLEMDEEGVPPTALREVSLLQLLSQSLYVVRLLCVEHVHHHKSGKPLLYLVFEFLDTDLKKFIDSHRKGPNPRPLPPSLVQSFLFQLCKGVAHCHGHGVLHRDLKPQNLLLDQDKGILKIADLGLGRAFTIPLKSYTHEIVTL 178
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9498318 9498854 - Conep19aG0150400.1 Cone19ag1463 459900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1463 178 FunFam Cyclin-dependent kinase B2,2 1 91 - -
Cone19ag1463 178 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524(InterPro)
Cone19ag1463 178 Pfam Protein kinase domain 4 175 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1463 178 SMART serkin_6 4 176 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1463 178 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1463 178 SUPERFAMILY Protein kinase-like (PK-like) 1 177 IPR011009 -
Cone19ag1463 178 Gene3D Transferase(Phosphotransferase) domain 1 88 178 - -
Cone19ag1463 178 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Cone19ag1463 178 ProSiteProfiles Protein kinase domain profile. 4 178 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1463 178 PANTHER CELL DIVISION PROTEIN KINASE 3 178 IPR050108 GO:0000082(PANTHER)|GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0004693(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)|GO:0010033(PANTHER)|GO:0010389(PANTHER)|GO:0010468(PANTHER)|GO:0030332(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1463 Cone-Chr19:9498318 Cone7ag1950 Cone-Chr7:12440276 1.31E-75 dispersed
Cone19ag1463 Cone-Chr19:9498318 Cone13ag1458 Cone-Chr13:10420415 1.47E-126 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82437 PF00564 PB1 4.80E-17 CL0072 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1463 K07760 - csv:101204557 332.413