Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag1467 ATGTCACCCATCCTCATCCAGTACTCGCTGCTCTTTCTCTTGTTCTCATGTGCTGGACTTCAGATCTCCTTCTCCGTGACCGATTCCCACGATGCTGCAGTGCTCCAGTCATTGAAAGATGAATGGCAAAATACACCACCAAGCTGGGGAAACTCTGATGATCCCTGTGGAAAACCCTGGGAAGGAGTCACCTGCAACAATTCTAGAGTGACTGCATTGAGATTATCAACCATGGGCCTCAAAGGTACACTCAGTGGTGATATTGGGGGCCTCACTGAATTAAGATCCTTGGACCTGTCATTTAACCGAGGTCTCTCTGGTTCCCTCTCTCCGCGCTTAGGGGATCTGCAAAATTTGAACATATTAATTCTAGCTGGCTGCGGCTTTAGTGGTAATATTCCTGAGGAACTGGGAAATCTTTCGGACCTAACATTCTTGGCTCTGAATTCAAACAAACTCTCCGGTAGAATACCTCCTTCCTTGGGTAAACTCTCCAAACTTTACTGGCTTGACTTGGCAGACAATCTGTTAACAGGACATCTCCCGGTTTCAACTTCCACCTCACCGGGTTTGGACCTCCTTATGAAAGCAAAGCACTTCCATTTGAATAAAAACCGACTATCAGGTTCCATACCGCCTCAACTTTTTAGCTCCGATATGGTATTGATACACATATTATTTGATGGCAATCAATTTTCTGGGAGTATCCCACCAACTTTAGGACTTGTTAAGAGTGTCGAGGTTCTTCGGCTTGATCGAAATTCCCTTGCGGGCGATGTCCCATCTAACCTTAGCAACCTTATAAACATCAATGAGTTGAATTTAGCCCATAATATTTTGACGGGCCCTCTCCCAAACTTAACTCAAATGATTACGCTCAACTACGTGGACCTCAGTAATAACTCATTTGACCCATCATTAGCTCCACTTTGGTTCTCATGCTTGCCGTCTCTCACCACCATGATTATTGAATATGGATCAATACAAGGTCCTGTACCACATCAGCTTTTTAGCTTACCACAAATCCAGCAAGTGAAATTGAGGAACAATGCATTTAATGAGACTTTGAACTTGGGTGACAATATCAGTCCGCAATTGGAGCTAGTTGATTTGCAAAATAATCAAATATCCTCCGTAACTCTTGGTTCTGGATATACCAAAACATTAATACTTATAGGAAACCTCGTATGCATCACTGCCCTCTCAAATACTAATTATTGCCAGATTCAACAGCAGTCTACAAAGCCATACTCAACCAGCCTGGCTAACTGTGGATTCAAATCATGTCCCCTTGAGCAGAAGCTGAGCCCTCAGAGTTGTGAATGTGCCTATCCATACGAGGGAACTTTGTACTTTAGAGGACCCTTGTTCAGGGAGCTGTCTAATGAGAATCTGTTTCATTCACTAGAAATGAGCCTGTGGGTCAAACTCCAGCTCACTCCTGGTTCAGTTTCAATTGAAAACCCTTTCTTTAATACTGATGATTATCTTCAAGTGCAACTAGCACTCTTTCCACCCACAGGAAAATATTTCAATAGGTTAGAGATTCAGCGGATCGGGTTTCAATTGAGTAATCAAACTTATAAACCTCCTCCGGAATTTGGACCTTATTATTTTATTGCATCTCCTTATGGTTTCTTGGCCACTGACGGAGGGCCTTCTATTAGCCCGGCCATGGTAGTAGGGATAGCTATTGGCTGCAGCTTTCTGCTTCTTGGCCTTATTGGGGTTGGAATATATGCCGTTCGACAAAAGAGACGGGCAGAAAGGGCAATTGGACTGAGCAAGCCATTTGCATCATGGGGACCAAGCGGCAAAGATAGCGGGGGTGCACCACAGTTAAAGGGAGCGAGATGGTTCTCTTATGATGAACTCAAAAGGTGTACGAATAATTTTTCTGGAAGAAACGAGGTAGGGTCTGGTGGGTATGGAAAGGTATATAGAGGAATGTTGGCCGATGGACAAGTAGTTGCTATCAAGAGAGCTCAGCAAGGATCCATGCAGGGGGGACTCGAATTCAAGACTGAAATTGAACTGCTTTCACGAGTTCACCACAAGAATCTTGTTGGCCTCGTGGGATTTTGTTTTGAGCAAGGAGAACAGATTCTAGTTTATGAATTCATGCCTACTGGAACCCTCAGGGACAGCTTATCTGGGAGGTCTGGAATTCAGCTTGATTGGAAGAGAAGACTCCGCATCGCACTTGGGTCAGCAAGAGGACTAGCTTATCTACACGAGCATGCAAATCCTCCAATAATTCACCGAGATGTGAAGTCGACTAATATTCTCTTGGATGAAAATTTAACTGCAAAGGTTGCAGATTTTGGCTTATCGAAGCTTGTGTCGGACGGTGAAAAAGGACATATTTCAACTCAAGTTAAAGGCACACTAGGTTACCTGGATCCTGAATATTACATCACTCAACAATTAACCGAGAAAAGCGACGTCTATAGTTATGGAGTGGTTATGCTGGAATTGGTTACTGCAAAGCAACCAATTGAGAAAGGTAAATACATTGTTCGTGAGATGCGATTGCTACTGAATCAGACTGATGAAGAGCATTATGAATTGAGAGGTAGAGGTATTATGGATTCGGTCATCAGATGCTCGACCAATGTAGTTGGGTTTGGGAAGTTTATCGATTTGGCCATGCGTTGTGTAGAAGAATCAGCTGCAGACCGTCCAACTATGAGTGAGGTAGTTAAGACTATTGAAGCTATATTACATAATGATGGGATAAATACAAACTCAACATCTGCATCCTCATCTGCCACTGAGTTTTCAGCTTTGAAAGGTGCTCCTAAACATCCCTATAATGATGGTCTACCAGGAAAGGAGGTTAATGAAAGTACAGCGTTTGATTATAGTGGTGGATACGCAATTTCTACTGAAGTTGAACCTAAATGA 2907 43.21 MSPILIQYSLLFLLFSCAGLQISFSVTDSHDAAVLQSLKDEWQNTPPSWGNSDDPCGKPWEGVTCNNSRVTALRLSTMGLKGTLSGDIGGLTELRSLDLSFNRGLSGSLSPRLGDLQNLNILILAGCGFSGNIPEELGNLSDLTFLALNSNKLSGRIPPSLGKLSKLYWLDLADNLLTGHLPVSTSTSPGLDLLMKAKHFHLNKNRLSGSIPPQLFSSDMVLIHILFDGNQFSGSIPPTLGLVKSVEVLRLDRNSLAGDVPSNLSNLININELNLAHNILTGPLPNLTQMITLNYVDLSNNSFDPSLAPLWFSCLPSLTTMIIEYGSIQGPVPHQLFSLPQIQQVKLRNNAFNETLNLGDNISPQLELVDLQNNQISSVTLGSGYTKTLILIGNLVCITALSNTNYCQIQQQSTKPYSTSLANCGFKSCPLEQKLSPQSCECAYPYEGTLYFRGPLFRELSNENLFHSLEMSLWVKLQLTPGSVSIENPFFNTDDYLQVQLALFPPTGKYFNRLEIQRIGFQLSNQTYKPPPEFGPYYFIASPYGFLATDGGPSISPAMVVGIAIGCSFLLLGLIGVGIYAVRQKRRAERAIGLSKPFASWGPSGKDSGGAPQLKGARWFSYDELKRCTNNFSGRNEVGSGGYGKVYRGMLADGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQILVYEFMPTGTLRDSLSGRSGIQLDWKRRLRIALGSARGLAYLHEHANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDGEKGHISTQVKGTLGYLDPEYYITQQLTEKSDVYSYGVVMLELVTAKQPIEKGKYIVREMRLLLNQTDEEHYELRGRGIMDSVIRCSTNVVGFGKFIDLAMRCVEESAADRPTMSEVVKTIEAILHNDGINTNSTSASSSATEFSALKGAPKHPYNDGLPGKEVNESTAFDYSGGYAISTEVEPK 968
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9518524 9523786 + Conep19aG0150800.1 Cone19ag1467 459904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag1467 968 MobiDBLite consensus disorder prediction 925 947 - -
Cone19ag1467 968 Gene3D Phosphorylase Kinase; domain 1 606 707 - -
Cone19ag1467 968 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 708 920 - -
Cone19ag1467 968 Pfam Protein tyrosine and serine/threonine kinase 636 903 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1467 968 Gene3D Transferase(Phosphotransferase) domain 1 708 928 - -
Cone19ag1467 968 ProSiteProfiles Protein kinase domain profile. 632 908 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1467 968 PANTHER RECEPTOR-LIKE PROTEIN 55 47 905 - -
Cone19ag1467 968 SUPERFAMILY L domain-like 48 431 - -
Cone19ag1467 968 Gene3D Ribonuclease Inhibitor 289 383 IPR032675 -
Cone19ag1467 968 SUPERFAMILY Protein kinase-like (PK-like) 613 905 IPR011009 -
Cone19ag1467 968 FunFam Leucine-rich repeat protein kinase family protein 602 707 - -
Cone19ag1467 968 FunFam Predicted protein 189 410 - -
Cone19ag1467 968 FunFam Leucine-rich repeat family protein 30 186 - -
Cone19ag1467 968 ProSitePatterns Serine/Threonine protein kinases active-site signature. 752 764 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag1467 968 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Cone19ag1467 968 ProSitePatterns Protein kinases ATP-binding region signature. 638 660 IPR017441 GO:0005524(InterPro)
Cone19ag1467 968 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Cone19ag1467 968 SMART serkin_6 632 907 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag1467 968 Gene3D Ribonuclease Inhibitor 188 288 IPR032675 -
Cone19ag1467 968 Pfam Leucine Rich Repeat 118 140 IPR001611 GO:0005515(InterPro)
Cone19ag1467 968 Pfam Leucine Rich Repeat 143 164 IPR001611 GO:0005515(InterPro)
Cone19ag1467 968 CDD STKc_IRAK 638 907 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1467 Cone-Chr19:9518524 Cone3ag0877 Cone-Chr3:4481877 5.91E-277 dispersed
Cone4ag0161 Cone-Chr4:761011 Cone19ag1467 Cone-Chr19:9518524 1.41E-53 dispersed
Cone13ag1462 Cone-Chr13:10439336 Cone19ag1467 Cone-Chr19:9518524 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82438 PF05212 DUF707 1.80E-140 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag1467 - - - 0.0