Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone19ag1467 | ATGTCACCCATCCTCATCCAGTACTCGCTGCTCTTTCTCTTGTTCTCATGTGCTGGACTTCAGATCTCCTTCTCCGTGACCGATTCCCACGATGCTGCAGTGCTCCAGTCATTGAAAGATGAATGGCAAAATACACCACCAAGCTGGGGAAACTCTGATGATCCCTGTGGAAAACCCTGGGAAGGAGTCACCTGCAACAATTCTAGAGTGACTGCATTGAGATTATCAACCATGGGCCTCAAAGGTACACTCAGTGGTGATATTGGGGGCCTCACTGAATTAAGATCCTTGGACCTGTCATTTAACCGAGGTCTCTCTGGTTCCCTCTCTCCGCGCTTAGGGGATCTGCAAAATTTGAACATATTAATTCTAGCTGGCTGCGGCTTTAGTGGTAATATTCCTGAGGAACTGGGAAATCTTTCGGACCTAACATTCTTGGCTCTGAATTCAAACAAACTCTCCGGTAGAATACCTCCTTCCTTGGGTAAACTCTCCAAACTTTACTGGCTTGACTTGGCAGACAATCTGTTAACAGGACATCTCCCGGTTTCAACTTCCACCTCACCGGGTTTGGACCTCCTTATGAAAGCAAAGCACTTCCATTTGAATAAAAACCGACTATCAGGTTCCATACCGCCTCAACTTTTTAGCTCCGATATGGTATTGATACACATATTATTTGATGGCAATCAATTTTCTGGGAGTATCCCACCAACTTTAGGACTTGTTAAGAGTGTCGAGGTTCTTCGGCTTGATCGAAATTCCCTTGCGGGCGATGTCCCATCTAACCTTAGCAACCTTATAAACATCAATGAGTTGAATTTAGCCCATAATATTTTGACGGGCCCTCTCCCAAACTTAACTCAAATGATTACGCTCAACTACGTGGACCTCAGTAATAACTCATTTGACCCATCATTAGCTCCACTTTGGTTCTCATGCTTGCCGTCTCTCACCACCATGATTATTGAATATGGATCAATACAAGGTCCTGTACCACATCAGCTTTTTAGCTTACCACAAATCCAGCAAGTGAAATTGAGGAACAATGCATTTAATGAGACTTTGAACTTGGGTGACAATATCAGTCCGCAATTGGAGCTAGTTGATTTGCAAAATAATCAAATATCCTCCGTAACTCTTGGTTCTGGATATACCAAAACATTAATACTTATAGGAAACCTCGTATGCATCACTGCCCTCTCAAATACTAATTATTGCCAGATTCAACAGCAGTCTACAAAGCCATACTCAACCAGCCTGGCTAACTGTGGATTCAAATCATGTCCCCTTGAGCAGAAGCTGAGCCCTCAGAGTTGTGAATGTGCCTATCCATACGAGGGAACTTTGTACTTTAGAGGACCCTTGTTCAGGGAGCTGTCTAATGAGAATCTGTTTCATTCACTAGAAATGAGCCTGTGGGTCAAACTCCAGCTCACTCCTGGTTCAGTTTCAATTGAAAACCCTTTCTTTAATACTGATGATTATCTTCAAGTGCAACTAGCACTCTTTCCACCCACAGGAAAATATTTCAATAGGTTAGAGATTCAGCGGATCGGGTTTCAATTGAGTAATCAAACTTATAAACCTCCTCCGGAATTTGGACCTTATTATTTTATTGCATCTCCTTATGGTTTCTTGGCCACTGACGGAGGGCCTTCTATTAGCCCGGCCATGGTAGTAGGGATAGCTATTGGCTGCAGCTTTCTGCTTCTTGGCCTTATTGGGGTTGGAATATATGCCGTTCGACAAAAGAGACGGGCAGAAAGGGCAATTGGACTGAGCAAGCCATTTGCATCATGGGGACCAAGCGGCAAAGATAGCGGGGGTGCACCACAGTTAAAGGGAGCGAGATGGTTCTCTTATGATGAACTCAAAAGGTGTACGAATAATTTTTCTGGAAGAAACGAGGTAGGGTCTGGTGGGTATGGAAAGGTATATAGAGGAATGTTGGCCGATGGACAAGTAGTTGCTATCAAGAGAGCTCAGCAAGGATCCATGCAGGGGGGACTCGAATTCAAGACTGAAATTGAACTGCTTTCACGAGTTCACCACAAGAATCTTGTTGGCCTCGTGGGATTTTGTTTTGAGCAAGGAGAACAGATTCTAGTTTATGAATTCATGCCTACTGGAACCCTCAGGGACAGCTTATCTGGGAGGTCTGGAATTCAGCTTGATTGGAAGAGAAGACTCCGCATCGCACTTGGGTCAGCAAGAGGACTAGCTTATCTACACGAGCATGCAAATCCTCCAATAATTCACCGAGATGTGAAGTCGACTAATATTCTCTTGGATGAAAATTTAACTGCAAAGGTTGCAGATTTTGGCTTATCGAAGCTTGTGTCGGACGGTGAAAAAGGACATATTTCAACTCAAGTTAAAGGCACACTAGGTTACCTGGATCCTGAATATTACATCACTCAACAATTAACCGAGAAAAGCGACGTCTATAGTTATGGAGTGGTTATGCTGGAATTGGTTACTGCAAAGCAACCAATTGAGAAAGGTAAATACATTGTTCGTGAGATGCGATTGCTACTGAATCAGACTGATGAAGAGCATTATGAATTGAGAGGTAGAGGTATTATGGATTCGGTCATCAGATGCTCGACCAATGTAGTTGGGTTTGGGAAGTTTATCGATTTGGCCATGCGTTGTGTAGAAGAATCAGCTGCAGACCGTCCAACTATGAGTGAGGTAGTTAAGACTATTGAAGCTATATTACATAATGATGGGATAAATACAAACTCAACATCTGCATCCTCATCTGCCACTGAGTTTTCAGCTTTGAAAGGTGCTCCTAAACATCCCTATAATGATGGTCTACCAGGAAAGGAGGTTAATGAAAGTACAGCGTTTGATTATAGTGGTGGATACGCAATTTCTACTGAAGTTGAACCTAAATGA | 2907 | 43.21 | MSPILIQYSLLFLLFSCAGLQISFSVTDSHDAAVLQSLKDEWQNTPPSWGNSDDPCGKPWEGVTCNNSRVTALRLSTMGLKGTLSGDIGGLTELRSLDLSFNRGLSGSLSPRLGDLQNLNILILAGCGFSGNIPEELGNLSDLTFLALNSNKLSGRIPPSLGKLSKLYWLDLADNLLTGHLPVSTSTSPGLDLLMKAKHFHLNKNRLSGSIPPQLFSSDMVLIHILFDGNQFSGSIPPTLGLVKSVEVLRLDRNSLAGDVPSNLSNLININELNLAHNILTGPLPNLTQMITLNYVDLSNNSFDPSLAPLWFSCLPSLTTMIIEYGSIQGPVPHQLFSLPQIQQVKLRNNAFNETLNLGDNISPQLELVDLQNNQISSVTLGSGYTKTLILIGNLVCITALSNTNYCQIQQQSTKPYSTSLANCGFKSCPLEQKLSPQSCECAYPYEGTLYFRGPLFRELSNENLFHSLEMSLWVKLQLTPGSVSIENPFFNTDDYLQVQLALFPPTGKYFNRLEIQRIGFQLSNQTYKPPPEFGPYYFIASPYGFLATDGGPSISPAMVVGIAIGCSFLLLGLIGVGIYAVRQKRRAERAIGLSKPFASWGPSGKDSGGAPQLKGARWFSYDELKRCTNNFSGRNEVGSGGYGKVYRGMLADGQVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQILVYEFMPTGTLRDSLSGRSGIQLDWKRRLRIALGSARGLAYLHEHANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDGEKGHISTQVKGTLGYLDPEYYITQQLTEKSDVYSYGVVMLELVTAKQPIEKGKYIVREMRLLLNQTDEEHYELRGRGIMDSVIRCSTNVVGFGKFIDLAMRCVEESAADRPTMSEVVKTIEAILHNDGINTNSTSASSSATEFSALKGAPKHPYNDGLPGKEVNESTAFDYSGGYAISTEVEPK | 968 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 9518524 | 9523786 | + | Conep19aG0150800.1 | Cone19ag1467 | 459904 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone19ag1467 | 968 | MobiDBLite | consensus disorder prediction | 925 | 947 | - | - | |
Cone19ag1467 | 968 | Gene3D | Phosphorylase Kinase; domain 1 | 606 | 707 | - | - | |
Cone19ag1467 | 968 | FunFam | LRR receptor-like serine/threonine-protein kinase HSL2 | 708 | 920 | - | - | |
Cone19ag1467 | 968 | Pfam | Protein tyrosine and serine/threonine kinase | 636 | 903 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag1467 | 968 | Gene3D | Transferase(Phosphotransferase) domain 1 | 708 | 928 | - | - | |
Cone19ag1467 | 968 | ProSiteProfiles | Protein kinase domain profile. | 632 | 908 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone19ag1467 | 968 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 47 | 905 | - | - | |
Cone19ag1467 | 968 | SUPERFAMILY | L domain-like | 48 | 431 | - | - | |
Cone19ag1467 | 968 | Gene3D | Ribonuclease Inhibitor | 289 | 383 | IPR032675 | - | |
Cone19ag1467 | 968 | SUPERFAMILY | Protein kinase-like (PK-like) | 613 | 905 | IPR011009 | - | |
Cone19ag1467 | 968 | FunFam | Leucine-rich repeat protein kinase family protein | 602 | 707 | - | - | |
Cone19ag1467 | 968 | FunFam | Predicted protein | 189 | 410 | - | - | |
Cone19ag1467 | 968 | FunFam | Leucine-rich repeat family protein | 30 | 186 | - | - | |
Cone19ag1467 | 968 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 752 | 764 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag1467 | 968 | Gene3D | Ribonuclease Inhibitor | 29 | 187 | IPR032675 | - | |
Cone19ag1467 | 968 | ProSitePatterns | Protein kinases ATP-binding region signature. | 638 | 660 | IPR017441 | GO:0005524(InterPro) | |
Cone19ag1467 | 968 | Pfam | Leucine rich repeat N-terminal domain | 29 | 66 | IPR013210 | - | |
Cone19ag1467 | 968 | SMART | serkin_6 | 632 | 907 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone19ag1467 | 968 | Gene3D | Ribonuclease Inhibitor | 188 | 288 | IPR032675 | - | |
Cone19ag1467 | 968 | Pfam | Leucine Rich Repeat | 118 | 140 | IPR001611 | GO:0005515(InterPro) | |
Cone19ag1467 | 968 | Pfam | Leucine Rich Repeat | 143 | 164 | IPR001611 | GO:0005515(InterPro) | |
Cone19ag1467 | 968 | CDD | STKc_IRAK | 638 | 907 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone19ag1467 | Cone-Chr19:9518524 | Cone3ag0877 | Cone-Chr3:4481877 | 5.91E-277 | dispersed | |
Cone4ag0161 | Cone-Chr4:761011 | Cone19ag1467 | Cone-Chr19:9518524 | 1.41E-53 | dispersed | |
Cone13ag1462 | Cone-Chr13:10439336 | Cone19ag1467 | Cone-Chr19:9518524 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82438 | PF05212 | DUF707 | 1.80E-140 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone19ag1467 | - | - | - | 0.0 |