Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone1ag0003 | ATGGAGTTGCTGGATATCCTTCTCACGATGACAGCACTTACCTTGCTTTGTTTGTGGTGCCGTTTGTGCACTGTCAAGCCGAGAGAACGGAAGAATCTCCCACCTGGCCCACCAGGTTGGCCCCTTGTCGGCAATCTCATCCAAGTCATCCTGCAACGACGTCCGTTCATCTTTATAGTACGTGATTTGCGGGCGAAATATGGACCGATATTCACAATGCGAATGGGCCAACGTACACTTATTGTCGTCACCAGCTCGGAACTCATTCACGAAGCTTTAGTCCAGAGAAGCCTAACATTTGCCAACCGGCCAGCTGACTCGCCGATACGCCTTGTGTTCAGTGCAGGGAAGTGTGCAGTCAACTCAGCTGAATATGGGCCTTTTTGGCGAACCCTCCGCCGGAACTTCGTTAGCGAGTTAATCAGCCCCATAAAAATAAGGCAATGCAGCTGGATACGAAAGTGGGCGCTTGAAAACCACATGGAGAGGCTGAAGAAAGAGGCTTTGGAGCAGGGCTTTGTCCAGGTCATGAGCAACTGCAGGCTCACTGTTTGTAGCATTCTTGTATGTATATGCTTTGGAGCTAAAGTCCGGGAAGAAGAGATCAAGGAAATCGAAAGCATATTAAAAGAGGTAATGATAATGACAACCCCAAAGTTTCCGGATTTCTTTCCGATTCTCTCTCCGTTGTTCCGGAAGCAACTAAGAGAAGCCAAAGAGCTGAGGAAGAAACAGTTAGAGTGTCTAGTCCCGCTGATAAGGAAGAGAAAGGATTTTGTGGAGAGAGATGAAGAGGCTAGTAGTGGGTGTTCAGAGATGGTTAGTCCAGTTGGTGCAGCTTACATCGACTCGTTATTTGGGTTAGAAATGCCAGGTCGAGGTCAGTTGGGAGAGGAAGAGCTTGTCACTCTGTGCTCAGAAGTGATTAATGCCGGAACTGATACGAGTGCAACAACAGTGGAGTGGGCTTTACTTCATTTGGTGGTGAACCAAGAGATTCAGGAAAGGTTGTACAGGGAAATAGTTGAGTGTGTAGGAGAAAATGAGTTGGTCACGGAGAAGGATGTTGAGAAAATGAATTACCTGGGCGCAGTGGTGAAAGAGACACTCAGGCGACACCCACCAAGTCATTTTTTGCTATCTCATGCAGCGACAAAGGAGACAGACCTGGGGGGATACACGGTTCCAGTGGGCGTGAGCGTGGAGTTCTACACGGCATGGGTGACGGAGGACCCCTCTTCATGGGAGAATCCAGGTGAGTTCCGACCCGAGAGATTCTTGGAGGGCGACGGGGTTGACGTGGACATGACGGGGACAAGAGGCATTAAGATGGTGCCATTTGGGGCTGGAAGGCGGATGTGTCCGGCAATGACGCTCGGCTTTTTGCACGTGAATTTGTTGCTTGCTAGGATGGTGCAAGCTTTCGAGTGGGTTCCCATTCCCGCTTCCCTCATAGACCCTACTGAGACTTTTGCTTTTACTGTTGTTATGAAAAACCCTCTCAAGGCTGTCATCTTGCCTAGGTGA | 1527 | 49.38 | MELLDILLTMTALTLLCLWCRLCTVKPRERKNLPPGPPGWPLVGNLIQVILQRRPFIFIVRDLRAKYGPIFTMRMGQRTLIVVTSSELIHEALVQRSLTFANRPADSPIRLVFSAGKCAVNSAEYGPFWRTLRRNFVSELISPIKIRQCSWIRKWALENHMERLKKEALEQGFVQVMSNCRLTVCSILVCICFGAKVREEEIKEIESILKEVMIMTTPKFPDFFPILSPLFRKQLREAKELRKKQLECLVPLIRKRKDFVERDEEASSGCSEMVSPVGAAYIDSLFGLEMPGRGQLGEEELVTLCSEVINAGTDTSATTVEWALLHLVVNQEIQERLYREIVECVGENELVTEKDVEKMNYLGAVVKETLRRHPPSHFLLSHAATKETDLGGYTVPVGVSVEFYTAWVTEDPSSWENPGEFRPERFLEGDGVDVDMTGTRGIKMVPFGAGRRMCPAMTLGFLHVNLLLARMVQAFEWVPIPASLIDPTETFAFTVVMKNPLKAVILPR | 508 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 58932 | 60458 | + | Conep01aG0000300.1 | Cone1ag0003 | 430694 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone1ag0003 | 508 | SUPERFAMILY | Cytochrome P450 | 34 | 508 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0003 | 508 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 13 | 507 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Cone1ag0003 | 508 | FunFam | Cytochrome P450 family protein | 27 | 508 | - | - | |
| Cone1ag0003 | 508 | Pfam | Cytochrome P450 | 34 | 500 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0003 | 508 | PRINTS | E-class P450 group I signature | 454 | 477 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0003 | 508 | PRINTS | E-class P450 group I signature | 300 | 317 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0003 | 508 | PRINTS | E-class P450 group I signature | 444 | 454 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0003 | 508 | PRINTS | E-class P450 group I signature | 404 | 428 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0003 | 508 | PRINTS | E-class P450 group I signature | 320 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0003 | 508 | PRINTS | E-class P450 group I signature | 183 | 201 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0003 | 508 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0003 | 508 | PRINTS | E-class P450 group I signature | 88 | 109 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0003 | 508 | PRINTS | E-class P450 group I signature | 363 | 381 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0003 | 508 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 447 | 456 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone1ag0003 | 508 | Gene3D | Cytochrome P450 | 26 | 508 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0003 | 508 | PRINTS | P450 superfamily signature | 311 | 328 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0003 | 508 | PRINTS | P450 superfamily signature | 364 | 375 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0003 | 508 | PRINTS | P450 superfamily signature | 445 | 454 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone1ag0003 | 508 | CDD | CYP77_89 | 66 | 502 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone1ag0003 | Cone-Chr1:58932 | Cone5ag0394 | Cone-Chr5:1690467 | 1.30E-146 | dispersed | |
| Cone1ag0003 | Cone-Chr1:58932 | Cone1ag1404 | Cone-Chr1:56772292 | 2.20E-151 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone1ag0003 | K21995 | - | vvi:100246851 | 788.875 |