Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag0014 | ATGGACAAAGGATGGGGACTAGCCCTTCCTGATTCTAAATCAAGGTTCTTCTCAAACAAGACGCCAGCAGCTGGACAAGCTTATTCTCTTTCAGACGGCCTTGACCGTTCTTCCAGAAACAACAACATCATAGGCTCTGATCAACGTTGTCTTCCTCATCAACCGGCGAGAATGTTTCAGGGTATTCAATTTCTGGTGAAACCCGGTCGAACCAGCGGTAAAGAAGTAGAGGAGGATCATCAAGCTGCAGCTGCTCTGACACAGTCTGATATTGATCAAGATCACGACCAGGATCACGAGAACCGATTGGTTGTGGATGAAGTGGATTTCTTCTCGGATAAGAAAAGGGTGGTTGATAATTATGATGGTAATGATCATGACGCCGATAAGGATGTCAAGAAGATGAGTGTGCTTAGTGTCAAGAAAGAAAAGGACAGTATATCTCATGGAGATCAAGTGCCTCCGCTGTCTCATCACTTGAATATTGCCAACGTAAATACTGGTTTACACCTACTAACTGCCAACACTGGAAGCGACCAATCAACTGTGGATGATGGGATTTCATCGGACGCCGAGGATAAGCGAGCCAAGAATATGGAGCTGGCACAACTGCAATTGGAGCTTCGACGCATGTTAACGGAGAATCAGAAGTTGAGAGAGATGCTAAGCCAAGTGAACATCAACTACCATTCTCTGCAGATGCATTTTATGTCATTCATGCAGCAACAGCAACAGCACCACCAACTTCAGAATGACGTTGATCGAGGACAATCTGGTGATCAGGATGAGAAACAAGAATTGATTGGAGGTAGATCAGTGGTGGTTCCAAGACAGTTTATGGATCTAGGGCCAGTCTCTGACACCGATCATGAGGCCGTGTCTCATTCTTCCTCCGATGAAAGAACTCGTTCTGGAACCCCCCTTGCTCACTCTGAAAAGCTCAAGACTAGTACAAGTACTACTCCGCCTCCTAGAAATGCCGATCCTTCAATACTGTTTGATCATCAGTCGGCCGACATGAACTCTAGTTTTCGAGATGGAAAGAGAATTGCAAGGGAGGAGAGCCCTGAATCAGACTCACATGGCTGGGGTCCTAAAAAAATCGCTAAATTGAACTCCGCCAAACTCATTGATCAATCGACTGAGGCCACCATGAGGAAAGCCCGCGTTTCTGTTCGTGCTCGTTCAGAAGCTCCCATGATTACAGATGGGTGCCAATGGCGGAAATATGGACAAAAGATGGCAAAAGGGAACCCATGCCCAAGAGCTTATTATAGGTGCACCATGGCGGTTGGCTGTCCGGTTCGTAAACAAGTTCAACGTTGTGCGGAAGACAGAAGCATATTGATAACAACGTACGAAGGCAATCACAACCACCCTCTCCCTCCAACAGCAATGGCCATGGCATCAACAACAACCGCAGCTGCGAGTATGTTGCTGTCAGGGAGCCTGCCCAGTGCAGACGGGCTCATGAACACAAATCTGCTAGCCAGAGCCATTCTTCCAAACTGCTCGTCCAGCATGGCCACCATTTCAGCGTCAGCTCCATTTCCAACAGTGACCTTGGACCTCACTCACTCCCCAGGCCCCAACCCCTTGCAATTCCAGCAGGCCCAGCAGATGAGACCAGCTGCTCCCAACTCACAATTCCAGCTTCCTACTTTCCATCACGGCAATGGAAACGTCCCTCATCATCAATTGCCTCAGGTTTTAAGTCAAGCACTACTCTACAACCAATCCAAGTTCTCAGGCCTCCAGCTATCCGGCGCTGGTCATGACATTCTGTCTAATTCGGCCCATAATTTCGTACAACATGGTGCTCCACAGCCGCTTTCTGATACATTAAGTGCTGCTACTGCCGCCATCACTTCCGATCCAAACTTTACAGCAGCTCTTGCAGCTGCCATTTCTTCCATCATCGGTGGAGCTCACCCCAACAATAATAGCGGTGGCAACGGCAGCAGTACTAGCAACAAAGTTAGCAGTTTTCCAGAAAATTAA | 2001 | 47.93 | MDKGWGLALPDSKSRFFSNKTPAAGQAYSLSDGLDRSSRNNNIIGSDQRCLPHQPARMFQGIQFLVKPGRTSGKEVEEDHQAAAALTQSDIDQDHDQDHENRLVVDEVDFFSDKKRVVDNYDGNDHDADKDVKKMSVLSVKKEKDSISHGDQVPPLSHHLNIANVNTGLHLLTANTGSDQSTVDDGISSDAEDKRAKNMELAQLQLELRRMLTENQKLREMLSQVNINYHSLQMHFMSFMQQQQQHHQLQNDVDRGQSGDQDEKQELIGGRSVVVPRQFMDLGPVSDTDHEAVSHSSSDERTRSGTPLAHSEKLKTSTSTTPPPRNADPSILFDHQSADMNSSFRDGKRIAREESPESDSHGWGPKKIAKLNSAKLIDQSTEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRSILITTYEGNHNHPLPPTAMAMASTTTAAASMLLSGSLPSADGLMNTNLLARAILPNCSSSMATISASAPFPTVTLDLTHSPGPNPLQFQQAQQMRPAAPNSQFQLPTFHHGNGNVPHHQLPQVLSQALLYNQSKFSGLQLSGAGHDILSNSAHNFVQHGAPQPLSDTLSAATAAITSDPNFTAALAAAISSIIGGAHPNNNSGGNGSSTSNKVSSFPEN | 666 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 120101 | 122696 | - | Conep01aG0001500.1 | Cone1ag0014 | 430705 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag0014 | 666 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Cone1ag0014 | 666 | MobiDBLite | consensus disorder prediction | 14 | 33 | - | - | |
Cone1ag0014 | 666 | MobiDBLite | consensus disorder prediction | 243 | 366 | - | - | |
Cone1ag0014 | 666 | SUPERFAMILY | WRKY DNA-binding domain | 394 | 462 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone1ag0014 | 666 | ProSiteProfiles | WRKY domain profile. | 396 | 462 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone1ag0014 | 666 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 184 | 646 | IPR044810 | GO:0003700(InterPro) | |
Cone1ag0014 | 666 | MobiDBLite | consensus disorder prediction | 299 | 326 | - | - | |
Cone1ag0014 | 666 | SMART | WRKY_cls | 401 | 461 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone1ag0014 | 666 | MobiDBLite | consensus disorder prediction | 645 | 666 | - | - | |
Cone1ag0014 | 666 | Coils | Coil | 194 | 228 | - | - | |
Cone1ag0014 | 666 | MobiDBLite | consensus disorder prediction | 175 | 194 | - | - | |
Cone1ag0014 | 666 | FunFam | probable WRKY transcription factor 31 | 386 | 463 | - | - | |
Cone1ag0014 | 666 | Pfam | WRKY DNA -binding domain | 403 | 460 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone1ag0014 | 666 | Gene3D | WRKY domain | 386 | 463 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone1ag0014 | 666 | MobiDBLite | consensus disorder prediction | 341 | 364 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0473 | Cone-Chr10:2196710 | Cone1ag0014 | Cone-Chr1:120101 | 6.65E-25 | dispersed | |
Cone12ag1367 | Cone-Chr12:10158602 | Cone1ag0014 | Cone-Chr1:120101 | 1.79E-100 | dispersed | |
Cone1ag0014 | Cone-Chr1:120101 | Cone8ag1424 | Cone-Chr8:11102295 | 1.01E-102 | dispersed | |
Cone9ag1341 | Cone-Chr9:10068119 | Cone1ag0014 | Cone-Chr1:120101 | 1.12E-16 | dispersed | |
Cone19ag0085 | Cone-Chr19:498410 | Cone1ag0014 | Cone-Chr1:120101 | 1.31E-55 | transposed | |
Cone1ag0014 | Cone-Chr1:120101 | Cone3ag1328 | Cone-Chr3:32232091 | 1.23E-112 | wgd | |
Cone1ag0014 | Cone-Chr1:120101 | Cone5ag1852 | Cone-Chr5:12997959 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45385 | PF11904 | GPCR_chapero_1 | 1.60E-97 | No_clan | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag0014 | - | - | - | 0.0 |