Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0014 ATGGACAAAGGATGGGGACTAGCCCTTCCTGATTCTAAATCAAGGTTCTTCTCAAACAAGACGCCAGCAGCTGGACAAGCTTATTCTCTTTCAGACGGCCTTGACCGTTCTTCCAGAAACAACAACATCATAGGCTCTGATCAACGTTGTCTTCCTCATCAACCGGCGAGAATGTTTCAGGGTATTCAATTTCTGGTGAAACCCGGTCGAACCAGCGGTAAAGAAGTAGAGGAGGATCATCAAGCTGCAGCTGCTCTGACACAGTCTGATATTGATCAAGATCACGACCAGGATCACGAGAACCGATTGGTTGTGGATGAAGTGGATTTCTTCTCGGATAAGAAAAGGGTGGTTGATAATTATGATGGTAATGATCATGACGCCGATAAGGATGTCAAGAAGATGAGTGTGCTTAGTGTCAAGAAAGAAAAGGACAGTATATCTCATGGAGATCAAGTGCCTCCGCTGTCTCATCACTTGAATATTGCCAACGTAAATACTGGTTTACACCTACTAACTGCCAACACTGGAAGCGACCAATCAACTGTGGATGATGGGATTTCATCGGACGCCGAGGATAAGCGAGCCAAGAATATGGAGCTGGCACAACTGCAATTGGAGCTTCGACGCATGTTAACGGAGAATCAGAAGTTGAGAGAGATGCTAAGCCAAGTGAACATCAACTACCATTCTCTGCAGATGCATTTTATGTCATTCATGCAGCAACAGCAACAGCACCACCAACTTCAGAATGACGTTGATCGAGGACAATCTGGTGATCAGGATGAGAAACAAGAATTGATTGGAGGTAGATCAGTGGTGGTTCCAAGACAGTTTATGGATCTAGGGCCAGTCTCTGACACCGATCATGAGGCCGTGTCTCATTCTTCCTCCGATGAAAGAACTCGTTCTGGAACCCCCCTTGCTCACTCTGAAAAGCTCAAGACTAGTACAAGTACTACTCCGCCTCCTAGAAATGCCGATCCTTCAATACTGTTTGATCATCAGTCGGCCGACATGAACTCTAGTTTTCGAGATGGAAAGAGAATTGCAAGGGAGGAGAGCCCTGAATCAGACTCACATGGCTGGGGTCCTAAAAAAATCGCTAAATTGAACTCCGCCAAACTCATTGATCAATCGACTGAGGCCACCATGAGGAAAGCCCGCGTTTCTGTTCGTGCTCGTTCAGAAGCTCCCATGATTACAGATGGGTGCCAATGGCGGAAATATGGACAAAAGATGGCAAAAGGGAACCCATGCCCAAGAGCTTATTATAGGTGCACCATGGCGGTTGGCTGTCCGGTTCGTAAACAAGTTCAACGTTGTGCGGAAGACAGAAGCATATTGATAACAACGTACGAAGGCAATCACAACCACCCTCTCCCTCCAACAGCAATGGCCATGGCATCAACAACAACCGCAGCTGCGAGTATGTTGCTGTCAGGGAGCCTGCCCAGTGCAGACGGGCTCATGAACACAAATCTGCTAGCCAGAGCCATTCTTCCAAACTGCTCGTCCAGCATGGCCACCATTTCAGCGTCAGCTCCATTTCCAACAGTGACCTTGGACCTCACTCACTCCCCAGGCCCCAACCCCTTGCAATTCCAGCAGGCCCAGCAGATGAGACCAGCTGCTCCCAACTCACAATTCCAGCTTCCTACTTTCCATCACGGCAATGGAAACGTCCCTCATCATCAATTGCCTCAGGTTTTAAGTCAAGCACTACTCTACAACCAATCCAAGTTCTCAGGCCTCCAGCTATCCGGCGCTGGTCATGACATTCTGTCTAATTCGGCCCATAATTTCGTACAACATGGTGCTCCACAGCCGCTTTCTGATACATTAAGTGCTGCTACTGCCGCCATCACTTCCGATCCAAACTTTACAGCAGCTCTTGCAGCTGCCATTTCTTCCATCATCGGTGGAGCTCACCCCAACAATAATAGCGGTGGCAACGGCAGCAGTACTAGCAACAAAGTTAGCAGTTTTCCAGAAAATTAA 2001 47.93 MDKGWGLALPDSKSRFFSNKTPAAGQAYSLSDGLDRSSRNNNIIGSDQRCLPHQPARMFQGIQFLVKPGRTSGKEVEEDHQAAAALTQSDIDQDHDQDHENRLVVDEVDFFSDKKRVVDNYDGNDHDADKDVKKMSVLSVKKEKDSISHGDQVPPLSHHLNIANVNTGLHLLTANTGSDQSTVDDGISSDAEDKRAKNMELAQLQLELRRMLTENQKLREMLSQVNINYHSLQMHFMSFMQQQQQHHQLQNDVDRGQSGDQDEKQELIGGRSVVVPRQFMDLGPVSDTDHEAVSHSSSDERTRSGTPLAHSEKLKTSTSTTPPPRNADPSILFDHQSADMNSSFRDGKRIAREESPESDSHGWGPKKIAKLNSAKLIDQSTEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRSILITTYEGNHNHPLPPTAMAMASTTTAAASMLLSGSLPSADGLMNTNLLARAILPNCSSSMATISASAPFPTVTLDLTHSPGPNPLQFQQAQQMRPAAPNSQFQLPTFHHGNGNVPHHQLPQVLSQALLYNQSKFSGLQLSGAGHDILSNSAHNFVQHGAPQPLSDTLSAATAAITSDPNFTAALAAAISSIIGGAHPNNNSGGNGSSTSNKVSSFPEN 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 120101 122696 - Conep01aG0001500.1 Cone1ag0014 430705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0014 666 MobiDBLite consensus disorder prediction 1 33 - -
Cone1ag0014 666 MobiDBLite consensus disorder prediction 14 33 - -
Cone1ag0014 666 MobiDBLite consensus disorder prediction 243 366 - -
Cone1ag0014 666 SUPERFAMILY WRKY DNA-binding domain 394 462 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone1ag0014 666 ProSiteProfiles WRKY domain profile. 396 462 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone1ag0014 666 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 184 646 IPR044810 GO:0003700(InterPro)
Cone1ag0014 666 MobiDBLite consensus disorder prediction 299 326 - -
Cone1ag0014 666 SMART WRKY_cls 401 461 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone1ag0014 666 MobiDBLite consensus disorder prediction 645 666 - -
Cone1ag0014 666 Coils Coil 194 228 - -
Cone1ag0014 666 MobiDBLite consensus disorder prediction 175 194 - -
Cone1ag0014 666 FunFam probable WRKY transcription factor 31 386 463 - -
Cone1ag0014 666 Pfam WRKY DNA -binding domain 403 460 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone1ag0014 666 Gene3D WRKY domain 386 463 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone1ag0014 666 MobiDBLite consensus disorder prediction 341 364 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0473 Cone-Chr10:2196710 Cone1ag0014 Cone-Chr1:120101 6.65E-25 dispersed
Cone12ag1367 Cone-Chr12:10158602 Cone1ag0014 Cone-Chr1:120101 1.79E-100 dispersed
Cone1ag0014 Cone-Chr1:120101 Cone8ag1424 Cone-Chr8:11102295 1.01E-102 dispersed
Cone9ag1341 Cone-Chr9:10068119 Cone1ag0014 Cone-Chr1:120101 1.12E-16 dispersed
Cone19ag0085 Cone-Chr19:498410 Cone1ag0014 Cone-Chr1:120101 1.31E-55 transposed
Cone1ag0014 Cone-Chr1:120101 Cone3ag1328 Cone-Chr3:32232091 1.23E-112 wgd
Cone1ag0014 Cone-Chr1:120101 Cone5ag1852 Cone-Chr5:12997959 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45385 PF11904 GPCR_chapero_1 1.60E-97 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0014 - - - 0.0