Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0021 ATGTACGTGGCATTAAACAAGCCTTCTCAGCTAACTGGTTGGAAAAGCAGCGGAGGCGATCCTTGTGTAGAGTCATGGGTAGGGGTCACTTGTGCTGGATCCGCCGTTGTTTCTGTTGAGATTTCTGGGTTAGGTCTTAATGGAACATTGGGATACTTACTCTCCGATCTTGTCTCATTGAAAATACTCGATTTGAGTGACAACATGCTTCATGACACTCTCCCATACCAGTTACCACCAAATCTTTCAAGCCTAAATCTTGCAGCCAACAATTTTACCGGGAATCTTCCCTATTCCATTGCCAATATGGTTTCATTAAGTTATTTGAACATTTGTCGAAATTCACTCTCCCAGTCAATTGGAGACATTTTCAGTAATCTTCCTGCCCTCATAACCGTGGATCTTTCTTTCAACAACTTCTCAGGGGAGCTTCCAATTTCCTTGGGCTTATTGTCCAATCTTTCTTCCCTCTATCTAGCGAACAACTTGTTGACTGGCTCGCTCAGTAACCTTAGAAATTTGACTTTAAATGCTCTAAATGTTGCAAACAATAACCTCAGTGGATGGATACCACCCGAGCTAATTTCAATTCCGAATTTCATATACGGTGGAAATTCATTTGATAATGGCCCTGCACCTCCTCCACCACCGTTTAGTGTTCCTCATCCCGGAAAAGCTCGAAATAAATCAAACCACTCTGCATCTGGGACCAATACCACAGGCTCTAGTGATGAATCATCTCAATCAAACAAAGGCTTGAGAATAGGGGCTATTATAGGCATAATTCTGGGTGCTGTCATTCTTGCTCTCATTACACTTGCAATTCTTGTCTTCTGTTTTCGAAAGAATAAAAAGAACAGTGGCCGAAGAAGAGCTCTCAGTGGAAGTCTCACTATTGGCACAACTAGTGTAAATGCTGATATTCAAGATCAAAGGGTTAAAAGTGTGGCTGCTGTTGCAGATCTGAAACCCCTTCCTTCTGAAAAACTAAAAGCCGAGAGGGTTTATGGAAAAAATGGATCTGTTAACAGGGTAAAGTCACCTATTACTGCTACCTCCTACACTGTTGCTTCTCTCCAGACAGCCACTAATAGCTTCAGCCAAGACTATCTAATTGGTGAAGGCTCACTTGGACGTGTTTACAGAGCAGAGTTCTCCAATGGGAAGATAATGGCTATTAAAAAGATCGACAATGCAGCACTGTCACTACAGGAGGAAGACAATTTTCTTGAAGCCGTCTCAAATATGTCAAGATTGAGGCACCCAAACATTGTTACACTTGGAGGATATTGTGCAGAACATGGTCAACGTCTTCTAGTCTATGAGTATATTGGAAATGGAAGTCTGCATGACATGCTCCATATCACCGATGATAGCAGCCAGGCTTTGACTTGGAATGCACGTGTAAGGGTAGCTCTTGGTACTGCTCGAGCGCTAGAATATTTGCACGAGGTGTGCTTGCCTTCTGTTGTGCACAGAAATTTCAAGTCAGCAAACATTCTACTTGATGAAGAGCTCAATCCTCACTTATCAGACTGTGGTATAGCTGCTCTAACACCCAACACAGAGCGACAGGTTTCGACTCAGATGATTGGATCATTTGGTTATAGTGCTCCCGAATTTGCCTTATCAGGAATATACACTGTCAAAAGTGATGTGTACAGCTTTGGGGTGGTCATGTTGGAACTGTTAACTGGTCGGAAACCACTTGACAGTTCAAGGTTGAGATCAGAACAGTCACTTGTGAGATGGGCGACTCCTCAACTCCATGACATAGATGCATTAGCGAAAATGGTCGATCCTTCTTTGAATGGCATGTACCCGGCCAAGTCTCTGTCACGTTTTGCAGATGTCATTGCCCTCTGTGTCCAGCCGGAACCTGAATTTAGGCCTCCCATGTCTGAAGTAGTGCAAGCACTAGTACGGTTAGTGCAGAGGGCTAGTGTGGTCAAAAGGCGTACCAGCGATGAATCCAGTTTCTCGTACAGGACCCCGGATCACGAGGCACTCGAGATGTCATTTTAG 2025 43.8 MYVALNKPSQLTGWKSSGGDPCVESWVGVTCAGSAVVSVEISGLGLNGTLGYLLSDLVSLKILDLSDNMLHDTLPYQLPPNLSSLNLAANNFTGNLPYSIANMVSLSYLNICRNSLSQSIGDIFSNLPALITVDLSFNNFSGELPISLGLLSNLSSLYLANNLLTGSLSNLRNLTLNALNVANNNLSGWIPPELISIPNFIYGGNSFDNGPAPPPPPFSVPHPGKARNKSNHSASGTNTTGSSDESSQSNKGLRIGAIIGIILGAVILALITLAILVFCFRKNKKNSGRRRALSGSLTIGTTSVNADIQDQRVKSVAAVADLKPLPSEKLKAERVYGKNGSVNRVKSPITATSYTVASLQTATNSFSQDYLIGEGSLGRVYRAEFSNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLGGYCAEHGQRLLVYEYIGNGSLHDMLHITDDSSQALTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGIAALTPNTERQVSTQMIGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRLRSEQSLVRWATPQLHDIDALAKMVDPSLNGMYPAKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRTSDESSFSYRTPDHEALEMSF 674
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 152551 157054 + Conep01aG0002200.1 Cone1ag0021 430712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0021 674 Gene3D Phosphorylase Kinase; domain 1 328 443 - -
Cone1ag0021 674 ProSiteProfiles Protein kinase domain profile. 366 643 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0021 674 Pfam Leucine rich repeat 80 140 IPR001611 GO:0005515(InterPro)
Cone1ag0021 674 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 444 654 - -
Cone1ag0021 674 SUPERFAMILY Protein kinase-like (PK-like) 345 640 IPR011009 -
Cone1ag0021 674 Gene3D Ribonuclease Inhibitor 1 254 IPR032675 -
Cone1ag0021 674 Pfam Protein tyrosine and serine/threonine kinase 371 640 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag0021 674 Gene3D Transferase(Phosphotransferase) domain 1 444 668 - -
Cone1ag0021 674 Pfam Leucine rich repeat N-terminal domain 5 31 IPR013210 -
Cone1ag0021 674 CDD STKc_IRAK 372 643 - -
Cone1ag0021 674 ProSiteProfiles Leucine-rich repeat profile. 153 175 IPR001611 GO:0005515(InterPro)
Cone1ag0021 674 PANTHER LEUCINE RICH REPEAT KINASE 2 176 642 IPR051420 -
Cone1ag0021 674 SUPERFAMILY L domain-like 19 199 - -
Cone1ag0021 674 MobiDBLite consensus disorder prediction 226 250 - -
Cone1ag0021 674 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 1 218 - -
Cone1ag0021 674 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 331 443 - -
Cone1ag0021 674 MobiDBLite consensus disorder prediction 211 250 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0021 Cone-Chr1:152551 Cone4ag0869 Cone-Chr4:6042321 1.26E-169 dispersed
Cone1ag0021 Cone-Chr1:152551 Cone5ag1846 Cone-Chr5:12958518 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82439 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0021 - - - 0.0