Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0023 ATGGAGGGTGGTTCTAATGGGAGTAGTAGCAGTTCTGGAGGGCGGGGGATGATCAATATGGGCCTAGGAGAGATGATGATGATGCAGCTGCCTCTCCTCTCCTCCACCCATCATCAACATCAACATCAACATCATCAACATCATCAACATCATCATCGACATGATGTTAGCTCTAACTGTAGTAGTGGCCCTATATTTCTCAATCCTTTACCTCAAACAGCAACAGCTAACAATCAGGATCAAAGAAGCCACATCAACATGAATCCCTCACCTGCCTGTTATTTCATGGAAGTCGACAACGATGGTGAAACCAACACTAATACTGCTGCCTCTGCTACTTCCTCTTCTACTGTTGTCAAGGCTAAGATCATGGCTCATCCTCACTACCGTCGCCTCTTGGCTGCCTACGTTAATTGTCAAAGAGTGGGTGCGCCGCCGGAAGTGGTGGCGAGGCTGGAAGAAGCAAGTGCAGCGGCGGCTACGATGAGCCTGGCTGCGGGTACGAGCTGCATCGGCGAAGATCCAGCGCTGGACCAGTTCATGGAGGCTTACTGTGAGATGCTGATCAAGTATGAGCAAGAACTCTCTAAGCCTTTCAAGGAAGCCATGCTTTTTCTTCAGAGGATCGACTGCCAATTCAAAGCCCTCACTCTTTCCTCTGATTCTGGTGAGATTTACTACTGA 684 48.98 MEGGSNGSSSSSGGRGMINMGLGEMMMMQLPLLSSTHHQHQHQHHQHHQHHHRHDVSSNCSSGPIFLNPLPQTATANNQDQRSHINMNPSPACYFMEVDNDGETNTNTAASATSSSTVVKAKIMAHPHYRRLLAAYVNCQRVGAPPEVVARLEEASAAAATMSLAAGTSCIGEDPALDQFMEAYCEMLIKYEQELSKPFKEAMLFLQRIDCQFKALTLSSDSGEIYY 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 160943 161835 - Conep01aG0002400.1 Cone1ag0023 430714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0023 227 SMART KNOX1_2 117 161 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Cone1ag0023 227 MobiDBLite consensus disorder prediction 58 87 - -
Cone1ag0023 227 SMART KNOX2_2 167 218 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Cone1ag0023 227 MobiDBLite consensus disorder prediction 38 54 - -
Cone1ag0023 227 MobiDBLite consensus disorder prediction 34 87 - -
Cone1ag0023 227 Pfam KNOX2 domain 170 217 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Cone1ag0023 227 PANTHER FUSED COMPOUND LEAF 1 100 218 - -
Cone1ag0023 227 Pfam KNOX1 domain 119 157 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0023 Cone-Chr1:160943 Cone4ag1642 Cone-Chr4:12394528 4.66E-25 dispersed
Cone1ag0023 Cone-Chr1:160943 Cone5ag1845 Cone-Chr5:12953241 1.94E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0023 - - - 0.0