Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag0032 | ATGGCTACCTCATATCTACACGGGCTCTGTCATAGAAAATCAAAGGGCAAGCGCTTCCAAATCCCTTCTTCATCAAAAACCCAGTTGAATTCATACATGGAGAACATGGAAAGAAAGAGATTTGACAGCGTCGAGTCATGGTCTATGATATTAGACTCGGAAAATGTCGAAACATGGGAGGTTTCAAAAGAAGATCAGGAAGACTGGACGGCGGATCTTTCCCAGCTCTTTATCGGAAACAAATTTGCTTCTGGAGCCCATAGTAGAATATACCGCGGGATCTACAAGCAACGAGCCGTTGCCGTGAAAATGGTGAGGATTCCAAACCAAAAGGAGGAGACAAGAACTCTACTCGAATCGCAATTTAAATCCGAAGTGGCTCTGCTTTCGCGTTTGTTTCATCCAAACATTGTTCAGTTCATTGCGGCTTGTAAGAAACCGCCTGTTTACTGCATCATCACGGAGTACATGTCACAAGGAACTCTAAGGATGTACTTGAACAAAAAGGAGCCCTACTCTCTTTCAACCGAAACAATCCTCCGTTTAGCCCTAGACATTTCTAGAGGAATGGAATATTTGCATTCACAAGGAGTGATCCATAGAGATCTCAAGTCGAACAATCTTCTTCTGAATGATGAGATGAGGGTTAAGGTTGCCGATTTTGGCACGTCGTGTCTTGAAACGCAGTGCCGGGAATCTAAAGGGAATAAGGGAACTTATCGGTGGATGGCCCCAGAAATGATCAAGGAGAAACCTTATACTCGTAAAGTCGATGTTTATAGCTTCGGAATAGTCCTATGGGAGCTCACTACGGCTTTGCTTCCCTTTCAAGGCATGACCCCCGTTCAGGCTGCATTTGCAGTTGCAGAAAAGAAAGAAAGGCCACCATTGCCTGCAAGTTGTCAACCTGCTCTGGCCCACCTTATAAAACGGTGTTGGGCCGCAAATCCATCGAAGCGGCCGGATTTTAGCAACATCGTAGCGGCTTTAGAGAAGTACGATGAATGTGTGAAGGAGGGGCTTCCGCTTCCGCACAACTCGGGTCTCGTGAATAAAAACGTCATTCTTGAACTTTTGAACGGCTGTATATCCACGACTTCTATAACTGTACATGCTTGA | 1119 | 45.22 | MATSYLHGLCHRKSKGKRFQIPSSSKTQLNSYMENMERKRFDSVESWSMILDSENVETWEVSKEDQEDWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQKEETRTLLESQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCRESKGNKGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKKERPPLPASCQPALAHLIKRCWAANPSKRPDFSNIVAALEKYDECVKEGLPLPHNSGLVNKNVILELLNGCISTTSITVHA | 372 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 202811 | 204985 | + | Conep01aG0003300.1 | Cone1ag0032 | 430723 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag0032 | 372 | ProSiteProfiles | Protein kinase domain profile. | 76 | 333 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag0032 | 372 | Pfam | Protein tyrosine and serine/threonine kinase | 79 | 330 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag0032 | 372 | Gene3D | Phosphorylase Kinase; domain 1 | 65 | 158 | - | - | |
Cone1ag0032 | 372 | CDD | STKc_MAP3K-like | 83 | 330 | - | - | |
Cone1ag0032 | 372 | FunFam | serine/threonine-protein kinase HT1 | 159 | 351 | - | - | |
Cone1ag0032 | 372 | PRINTS | Tyrosine kinase catalytic domain signature | 301 | 323 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag0032 | 372 | PRINTS | Tyrosine kinase catalytic domain signature | 192 | 210 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag0032 | 372 | PRINTS | Tyrosine kinase catalytic domain signature | 238 | 248 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag0032 | 372 | PRINTS | Tyrosine kinase catalytic domain signature | 257 | 279 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag0032 | 372 | PRINTS | Tyrosine kinase catalytic domain signature | 154 | 167 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag0032 | 372 | SMART | serkin_6 | 76 | 337 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag0032 | 372 | SUPERFAMILY | Protein kinase-like (PK-like) | 53 | 330 | IPR011009 | - | |
Cone1ag0032 | 372 | Gene3D | Transferase(Phosphotransferase) domain 1 | 159 | 344 | - | - | |
Cone1ag0032 | 372 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 198 | 210 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag0032 | 372 | FunFam | Serine/threonine-protein kinase isoform 1 | 66 | 158 | - | - | |
Cone1ag0032 | 372 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 70 | 331 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag0032 | Cone-Chr1:202811 | Cone2ag0904 | Cone-Chr2:34854307 | 1.23E-115 | dispersed | |
Cone6ag0836 | Cone-Chr6:4271358 | Cone1ag0032 | Cone-Chr1:202811 | 1.13E-28 | dispersed | |
Cone1ag0032 | Cone-Chr1:202811 | Cone5ag1835 | Cone-Chr5:12907493 | 1.16E-264 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82440 | PF02341 | RcbX | 2.10E-12 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag0032 | - | - | - | 0.0 |