Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0032 ATGGCTACCTCATATCTACACGGGCTCTGTCATAGAAAATCAAAGGGCAAGCGCTTCCAAATCCCTTCTTCATCAAAAACCCAGTTGAATTCATACATGGAGAACATGGAAAGAAAGAGATTTGACAGCGTCGAGTCATGGTCTATGATATTAGACTCGGAAAATGTCGAAACATGGGAGGTTTCAAAAGAAGATCAGGAAGACTGGACGGCGGATCTTTCCCAGCTCTTTATCGGAAACAAATTTGCTTCTGGAGCCCATAGTAGAATATACCGCGGGATCTACAAGCAACGAGCCGTTGCCGTGAAAATGGTGAGGATTCCAAACCAAAAGGAGGAGACAAGAACTCTACTCGAATCGCAATTTAAATCCGAAGTGGCTCTGCTTTCGCGTTTGTTTCATCCAAACATTGTTCAGTTCATTGCGGCTTGTAAGAAACCGCCTGTTTACTGCATCATCACGGAGTACATGTCACAAGGAACTCTAAGGATGTACTTGAACAAAAAGGAGCCCTACTCTCTTTCAACCGAAACAATCCTCCGTTTAGCCCTAGACATTTCTAGAGGAATGGAATATTTGCATTCACAAGGAGTGATCCATAGAGATCTCAAGTCGAACAATCTTCTTCTGAATGATGAGATGAGGGTTAAGGTTGCCGATTTTGGCACGTCGTGTCTTGAAACGCAGTGCCGGGAATCTAAAGGGAATAAGGGAACTTATCGGTGGATGGCCCCAGAAATGATCAAGGAGAAACCTTATACTCGTAAAGTCGATGTTTATAGCTTCGGAATAGTCCTATGGGAGCTCACTACGGCTTTGCTTCCCTTTCAAGGCATGACCCCCGTTCAGGCTGCATTTGCAGTTGCAGAAAAGAAAGAAAGGCCACCATTGCCTGCAAGTTGTCAACCTGCTCTGGCCCACCTTATAAAACGGTGTTGGGCCGCAAATCCATCGAAGCGGCCGGATTTTAGCAACATCGTAGCGGCTTTAGAGAAGTACGATGAATGTGTGAAGGAGGGGCTTCCGCTTCCGCACAACTCGGGTCTCGTGAATAAAAACGTCATTCTTGAACTTTTGAACGGCTGTATATCCACGACTTCTATAACTGTACATGCTTGA 1119 45.22 MATSYLHGLCHRKSKGKRFQIPSSSKTQLNSYMENMERKRFDSVESWSMILDSENVETWEVSKEDQEDWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQKEETRTLLESQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCRESKGNKGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKKERPPLPASCQPALAHLIKRCWAANPSKRPDFSNIVAALEKYDECVKEGLPLPHNSGLVNKNVILELLNGCISTTSITVHA 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 202811 204985 + Conep01aG0003300.1 Cone1ag0032 430723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0032 372 ProSiteProfiles Protein kinase domain profile. 76 333 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0032 372 Pfam Protein tyrosine and serine/threonine kinase 79 330 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag0032 372 Gene3D Phosphorylase Kinase; domain 1 65 158 - -
Cone1ag0032 372 CDD STKc_MAP3K-like 83 330 - -
Cone1ag0032 372 FunFam serine/threonine-protein kinase HT1 159 351 - -
Cone1ag0032 372 PRINTS Tyrosine kinase catalytic domain signature 301 323 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag0032 372 PRINTS Tyrosine kinase catalytic domain signature 192 210 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag0032 372 PRINTS Tyrosine kinase catalytic domain signature 238 248 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag0032 372 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag0032 372 PRINTS Tyrosine kinase catalytic domain signature 154 167 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag0032 372 SMART serkin_6 76 337 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0032 372 SUPERFAMILY Protein kinase-like (PK-like) 53 330 IPR011009 -
Cone1ag0032 372 Gene3D Transferase(Phosphotransferase) domain 1 159 344 - -
Cone1ag0032 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag0032 372 FunFam Serine/threonine-protein kinase isoform 1 66 158 - -
Cone1ag0032 372 PANTHER SERINE-THREONINE PROTEIN KINASE 70 331 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0032 Cone-Chr1:202811 Cone2ag0904 Cone-Chr2:34854307 1.23E-115 dispersed
Cone6ag0836 Cone-Chr6:4271358 Cone1ag0032 Cone-Chr1:202811 1.13E-28 dispersed
Cone1ag0032 Cone-Chr1:202811 Cone5ag1835 Cone-Chr5:12907493 1.16E-264 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82440 PF02341 RcbX 2.10E-12 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0032 - - - 0.0