Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0068 ATGGCCTCAAAAACCAATTCCAACTTTTCTTCAATCGACCAAAATGGTTTTCTTCCTAAAACAACCATACCCGATTCAATTACTCCAGAACAGTTATCCGAATCCCTAAAATCCGCCTTAAACTTGAGGCCTCCAAAGACTTCTACACAATCCTTGAAAAGTAAACTCAATTTAAATTCGGGTACTTCCTCACCTGGTCTTGAACAAACATCAACAGAAGTAGACTCTACTTATACTGATACAAGAGGCTCGCTTGAAAGCTCAATTGATCAAGAGAAGAAAATTTCGGAATATGGAAGTGTGAAGAACAGTTCTGTTTCTGCCAAAACGAGTGGGAGTGCAAAAATCAGTGACCGCATAGAAAGAGGAAGCACAAGCAGTGATGTCAGCGAAGAAAGCAGTTGTAGTAGCTTTAGTAGTAGTGTGAACAAGCCTCACAAAGCGAACGATATGAGATGGGAAGCGATCCAGGCTGTTAGAGTGAGAGATGGATTACTGGGATTAGGCCATTTTCGGCTTTTGAAGAGGTTGGGCTGTGGTGATATTGGGAGTGTTTATCTTTCGGAGTTGAGTGGTACTAAATGTTTTTTCGCAATGAAGGTTATGGATAAAGGGTCGTTAGCTAGTAGGAAGAAGTTGCTTAGAGCACAGACTGAACGGGAAATATTGCAATCTTTGGATCATCCTTTTCTTCCGACTTTATACTCCCATTTTGAGACAGATAAGTTCTCTTGCTTGGTTATGGAGTTCTGCCCTGGAGGTGATTTGCACACTCTAAGGCAAAGACAGCCTGGAAAACATTTTCAGGAGCAGGCAGTGAAATTTTACGTAGCAGAGGTTCTACTAGCTTTGGAATACCTTCACATGCTTGGGATCATCTACCGTGATCTAAAACCCGAAAATGTCCTTGTCCGAGAAGACGGACACATAATGCTCTCTGATTTTGACCTTTCACTTAGATGTGCTGTGAATCCAACTCTAATCAAAAGCTCCTCCATGGAATCATCCAACCCTCAAAGAAAGAACCCAGTCTATTGTGTCCAACCAGCTTGTATCGAGCCCTCTTGCATCATCCAACCGTCTTGTGTGGCCCCCACAACTTGCTTCTCTCCACGTCTCTTTTCCTCCAAGTCCAAGAAGGAGCGGAAACCCAAAAATGAGATCAGAAACCAGGTCAGCCCCCTACCCGAGCTCATTGCAGAGCCCACGGATGCTCGGTCGATGTCTTTCGTTGGGACCCACGAGTACTTGGCGCCTGAGATCATCAAGGGTGAAGGTCATGGTAGTGCTGTTGATTGGTGGACTTTTGGGATTTTTCTATACGAGCTATTGTTTGGAAAAACCCCTTTCAAAGGATCCGGAAATCGGGCCACATTGTTTAATGTTGTGGGCCAGCCGCTCCGGTTTCCAGAATCTCCAGTTGTTAGCTTTGCTGCACGGGATCTTATACGAGGATTGCTTGTTAAGGAGCCTCAACATAGATTGGCTTATAAAAGAGGTGCAACTGAGATTAAGCAACATCTCTTTTTCGAAGGGGTAAATTGGGCATTAATCCGATGTGCTACCCCACCTGATATTCCGAAACCTGTTGAGATCGAACGGATTCCGGGCCCCAAGCCAGCATCGACGAGTGAAAAGACTGCTGCCGTTGCTACTACTACAGCTGCTCCAGATCAGAAGAATCCGGATAATTATCTTGAGTTTGATTTTTTTTAG 1716 44.35 MASKTNSNFSSIDQNGFLPKTTIPDSITPEQLSESLKSALNLRPPKTSTQSLKSKLNLNSGTSSPGLEQTSTEVDSTYTDTRGSLESSIDQEKKISEYGSVKNSSVSAKTSGSAKISDRIERGSTSSDVSEESSCSSFSSSVNKPHKANDMRWEAIQAVRVRDGLLGLGHFRLLKRLGCGDIGSVYLSELSGTKCFFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYSHFETDKFSCLVMEFCPGGDLHTLRQRQPGKHFQEQAVKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVNPTLIKSSSMESSNPQRKNPVYCVQPACIEPSCIIQPSCVAPTTCFSPRLFSSKSKKERKPKNEIRNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHLFFEGVNWALIRCATPPDIPKPVEIERIPGPKPASTSEKTAAVATTTAAPDQKNPDNYLEFDFF 571
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 340368 343973 - Conep01aG0007200.1 Cone1ag0068 430759
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0068 571 PANTHER FLIPPASE KINASE 1-RELATED 81 543 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cone1ag0068 571 MobiDBLite consensus disorder prediction 1 142 - -
Cone1ag0068 571 MobiDBLite consensus disorder prediction 127 142 - -
Cone1ag0068 571 ProSiteProfiles Protein kinase domain profile. 171 510 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0068 571 SUPERFAMILY Protein kinase-like (PK-like) 145 535 IPR011009 -
Cone1ag0068 571 MobiDBLite consensus disorder prediction 98 120 - -
Cone1ag0068 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag0068 571 Pfam Protein kinase domain 172 321 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0068 571 Pfam Protein kinase domain 407 510 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0068 571 CDD STKc_phototropin_like 170 533 - -
Cone1ag0068 571 Gene3D Transferase(Phosphotransferase) domain 1 404 528 - -
Cone1ag0068 571 MobiDBLite consensus disorder prediction 545 560 - -
Cone1ag0068 571 Gene3D Transferase(Phosphotransferase) domain 1 255 322 - -
Cone1ag0068 571 FunFam Serine/threonine-protein kinase D6PK-like 169 254 - -
Cone1ag0068 571 MobiDBLite consensus disorder prediction 1 85 - -
Cone1ag0068 571 Gene3D Phosphorylase Kinase; domain 1 169 254 - -
Cone1ag0068 571 MobiDBLite consensus disorder prediction 535 563 - -
Cone1ag0068 571 SMART serkin_6 171 510 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0068 571 FunFam Serine/threonine-protein kinase AGC1-7 403 528 - -
Cone1ag0068 571 FunFam serine/threonine-protein kinase D6PK-like 255 322 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0068 Cone-Chr1:340368 Cone8ag1613 Cone-Chr8:11935714 1.00E-183 dispersed
Cone1ag0068 Cone-Chr1:340368 Cone2ag0776 Cone-Chr2:33726449 1.96E-50 wgd
Cone1ag0068 Cone-Chr1:340368 Cone5ag1793 Cone-Chr5:12725115 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82441 PF10551 MULE 3.40E-14 CL0219 Cone PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0068 K08286 - mdm:103422502 878.626