Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag0068 | ATGGCCTCAAAAACCAATTCCAACTTTTCTTCAATCGACCAAAATGGTTTTCTTCCTAAAACAACCATACCCGATTCAATTACTCCAGAACAGTTATCCGAATCCCTAAAATCCGCCTTAAACTTGAGGCCTCCAAAGACTTCTACACAATCCTTGAAAAGTAAACTCAATTTAAATTCGGGTACTTCCTCACCTGGTCTTGAACAAACATCAACAGAAGTAGACTCTACTTATACTGATACAAGAGGCTCGCTTGAAAGCTCAATTGATCAAGAGAAGAAAATTTCGGAATATGGAAGTGTGAAGAACAGTTCTGTTTCTGCCAAAACGAGTGGGAGTGCAAAAATCAGTGACCGCATAGAAAGAGGAAGCACAAGCAGTGATGTCAGCGAAGAAAGCAGTTGTAGTAGCTTTAGTAGTAGTGTGAACAAGCCTCACAAAGCGAACGATATGAGATGGGAAGCGATCCAGGCTGTTAGAGTGAGAGATGGATTACTGGGATTAGGCCATTTTCGGCTTTTGAAGAGGTTGGGCTGTGGTGATATTGGGAGTGTTTATCTTTCGGAGTTGAGTGGTACTAAATGTTTTTTCGCAATGAAGGTTATGGATAAAGGGTCGTTAGCTAGTAGGAAGAAGTTGCTTAGAGCACAGACTGAACGGGAAATATTGCAATCTTTGGATCATCCTTTTCTTCCGACTTTATACTCCCATTTTGAGACAGATAAGTTCTCTTGCTTGGTTATGGAGTTCTGCCCTGGAGGTGATTTGCACACTCTAAGGCAAAGACAGCCTGGAAAACATTTTCAGGAGCAGGCAGTGAAATTTTACGTAGCAGAGGTTCTACTAGCTTTGGAATACCTTCACATGCTTGGGATCATCTACCGTGATCTAAAACCCGAAAATGTCCTTGTCCGAGAAGACGGACACATAATGCTCTCTGATTTTGACCTTTCACTTAGATGTGCTGTGAATCCAACTCTAATCAAAAGCTCCTCCATGGAATCATCCAACCCTCAAAGAAAGAACCCAGTCTATTGTGTCCAACCAGCTTGTATCGAGCCCTCTTGCATCATCCAACCGTCTTGTGTGGCCCCCACAACTTGCTTCTCTCCACGTCTCTTTTCCTCCAAGTCCAAGAAGGAGCGGAAACCCAAAAATGAGATCAGAAACCAGGTCAGCCCCCTACCCGAGCTCATTGCAGAGCCCACGGATGCTCGGTCGATGTCTTTCGTTGGGACCCACGAGTACTTGGCGCCTGAGATCATCAAGGGTGAAGGTCATGGTAGTGCTGTTGATTGGTGGACTTTTGGGATTTTTCTATACGAGCTATTGTTTGGAAAAACCCCTTTCAAAGGATCCGGAAATCGGGCCACATTGTTTAATGTTGTGGGCCAGCCGCTCCGGTTTCCAGAATCTCCAGTTGTTAGCTTTGCTGCACGGGATCTTATACGAGGATTGCTTGTTAAGGAGCCTCAACATAGATTGGCTTATAAAAGAGGTGCAACTGAGATTAAGCAACATCTCTTTTTCGAAGGGGTAAATTGGGCATTAATCCGATGTGCTACCCCACCTGATATTCCGAAACCTGTTGAGATCGAACGGATTCCGGGCCCCAAGCCAGCATCGACGAGTGAAAAGACTGCTGCCGTTGCTACTACTACAGCTGCTCCAGATCAGAAGAATCCGGATAATTATCTTGAGTTTGATTTTTTTTAG | 1716 | 44.35 | MASKTNSNFSSIDQNGFLPKTTIPDSITPEQLSESLKSALNLRPPKTSTQSLKSKLNLNSGTSSPGLEQTSTEVDSTYTDTRGSLESSIDQEKKISEYGSVKNSSVSAKTSGSAKISDRIERGSTSSDVSEESSCSSFSSSVNKPHKANDMRWEAIQAVRVRDGLLGLGHFRLLKRLGCGDIGSVYLSELSGTKCFFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYSHFETDKFSCLVMEFCPGGDLHTLRQRQPGKHFQEQAVKFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVNPTLIKSSSMESSNPQRKNPVYCVQPACIEPSCIIQPSCVAPTTCFSPRLFSSKSKKERKPKNEIRNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHLFFEGVNWALIRCATPPDIPKPVEIERIPGPKPASTSEKTAAVATTTAAPDQKNPDNYLEFDFF | 571 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 340368 | 343973 | - | Conep01aG0007200.1 | Cone1ag0068 | 430759 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag0068 | 571 | PANTHER | FLIPPASE KINASE 1-RELATED | 81 | 543 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cone1ag0068 | 571 | MobiDBLite | consensus disorder prediction | 1 | 142 | - | - | |
Cone1ag0068 | 571 | MobiDBLite | consensus disorder prediction | 127 | 142 | - | - | |
Cone1ag0068 | 571 | ProSiteProfiles | Protein kinase domain profile. | 171 | 510 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag0068 | 571 | SUPERFAMILY | Protein kinase-like (PK-like) | 145 | 535 | IPR011009 | - | |
Cone1ag0068 | 571 | MobiDBLite | consensus disorder prediction | 98 | 120 | - | - | |
Cone1ag0068 | 571 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 292 | 304 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag0068 | 571 | Pfam | Protein kinase domain | 172 | 321 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag0068 | 571 | Pfam | Protein kinase domain | 407 | 510 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag0068 | 571 | CDD | STKc_phototropin_like | 170 | 533 | - | - | |
Cone1ag0068 | 571 | Gene3D | Transferase(Phosphotransferase) domain 1 | 404 | 528 | - | - | |
Cone1ag0068 | 571 | MobiDBLite | consensus disorder prediction | 545 | 560 | - | - | |
Cone1ag0068 | 571 | Gene3D | Transferase(Phosphotransferase) domain 1 | 255 | 322 | - | - | |
Cone1ag0068 | 571 | FunFam | Serine/threonine-protein kinase D6PK-like | 169 | 254 | - | - | |
Cone1ag0068 | 571 | MobiDBLite | consensus disorder prediction | 1 | 85 | - | - | |
Cone1ag0068 | 571 | Gene3D | Phosphorylase Kinase; domain 1 | 169 | 254 | - | - | |
Cone1ag0068 | 571 | MobiDBLite | consensus disorder prediction | 535 | 563 | - | - | |
Cone1ag0068 | 571 | SMART | serkin_6 | 171 | 510 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag0068 | 571 | FunFam | Serine/threonine-protein kinase AGC1-7 | 403 | 528 | - | - | |
Cone1ag0068 | 571 | FunFam | serine/threonine-protein kinase D6PK-like | 255 | 322 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag0068 | Cone-Chr1:340368 | Cone8ag1613 | Cone-Chr8:11935714 | 1.00E-183 | dispersed | |
Cone1ag0068 | Cone-Chr1:340368 | Cone2ag0776 | Cone-Chr2:33726449 | 1.96E-50 | wgd | |
Cone1ag0068 | Cone-Chr1:340368 | Cone5ag1793 | Cone-Chr5:12725115 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82441 | PF10551 | MULE | 3.40E-14 | CL0219 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag0068 | K08286 | - | mdm:103422502 | 878.626 |