Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0094 ATGTTAAAATTTGAGCACATTAATTTGTTAACACAAAACACCATGGAAATCCTTAATCCTCTTCTGCAATCTCCAAAAGCTTCTCCCTTCAAAATTCTCTTCTTACTTATTTCACTAGCTGCCCTCATAAGCTCAGCTTTACTTCTTTCCAACCATTTCCTCAAGGACATCAACTTTTTCTCTTCACCAATTTCACCACTACTTGTTCAAAACATTTGCAATAAGGCCCATGATCAAGCATCGTGTACATTCATGCTATCCCAAATGGGACCTGACAACAACTTTGATGATGATGATCGTCAACATGATCTACTACTACTTTTCTTAAGGAAATCTACACCACACATGCAAACTACAATCAAGATCATGAATCAAACGAGCCGTCGGATCAACAATCCTAGAGATCAAATGGCTCTAAATGATTGTGTAGAGCTTGTAAACCTCTCCATGGATAGGGTTTTGGACTCTATACTAGCTCTTCAAAGTAGCAAAACAAGTGGGTCCAGTACTAATGTTGAAGATGTTCATTCATGGCTCAGTAGTGTGCTCACCAATCATGTCACTTGCTTGGATGGGGTTATTGAGGGTTCAAGCACCATGCTTAGGTCTTCGATGGAGTCTAAGCTCAATGACTTGATATCAAGAGCTAGAACCTCTCTAGCCATTTTCGTTTACGTTCGAGAGAAGATGAGCCGTTCTAGTGAGAGTCTATCAGACAGGTCACGGTTTTTAGACGGGCTTACCTGGGGAGGAGTTAGATCTTTATCCTTACCATCAGTATCTTTTTTAACTCACAATCGACATACTATACCAGTTTCACCGATTAAAACCGAAGCCGGCGAGCCGTTGGAAGGGGAGTTCCCGGAGTGGGTAAGTGGCGGCGACAGGAGGATCTTGAAAGCCACAGTGAAGGAAGCTGTGGCTTCTGCACCTGATAAGAGTAACATTAGATACATTATTTATGTGAAAAAGGGGACTTATAAAGAGAATATTGAAGTTGGCAAGACCAAAAAGAATGTTATGATAATTGGTGATGGCATGGATTCAACTATCATCACTGGCAGCTTGAATGTTATTGATGGTGCCACAACCTTCAATTCTGCTACACTAGCTGCCGTTGGTGATGGGTTCATAGCCCAAGACATATGGATCCAAAACACAGCCGGGCCAGCAAAGCACCAAGCAGTTGCCCTACGTGTCGGAGCGGACCAATCGGTGATAAACAGGTGTCGTATCGACGCATATCAAGACACTCTATACGCCCACTCAAACCGACAGTTCTACCGAGACTCCTACATTACCGGAACTGTCGACTTCATCTTCGGAAATGCCGCCGTCGTATTCCAAAACTGCAAAATAGTAGCCAGAAAGCCCATGAGTAACCAGGCCAACATGGTAACAGCCCAAGGCCGAATCGACCCGAATCAGAACACGGGGACTTCGATCCAAAAATGTGACATTATAGCAAGCTCCGACCTCAAGCCCGTTAAGAAGTCCATTAAATCTTATTTGGGCCGGCCATGGAAGGAGTACTCTAGGACTGTGTTCATGCAGTCCAACATTGGTGACCATATCGATCCAACTGGATGGGCAGAGTGGAATGGGTCTTTTGCTTTGAAGACGTTGTATTATGGTGAGTATGCAAATTCCGGGGCAGGTGCTGATGTGAGCAAGCGTGTTAAATGGGCCGGTTACCATGTTATTAAGAACCCAGCTGAGGCCCAAAAGTTCACAGTTTCTAGGCTGATACAAGGTGAGGTTTGGTTGAAGCCCACTGGGGTTACTTATAGCGAGGGGCTTTGA 1803 44.26 MLKFEHINLLTQNTMEILNPLLQSPKASPFKILFLLISLAALISSALLLSNHFLKDINFFSSPISPLLVQNICNKAHDQASCTFMLSQMGPDNNFDDDDRQHDLLLLFLRKSTPHMQTTIKIMNQTSRRINNPRDQMALNDCVELVNLSMDRVLDSILALQSSKTSGSSTNVEDVHSWLSSVLTNHVTCLDGVIEGSSTMLRSSMESKLNDLISRARTSLAIFVYVREKMSRSSESLSDRSRFLDGLTWGGVRSLSLPSVSFLTHNRHTIPVSPIKTEAGEPLEGEFPEWVSGGDRRILKATVKEAVASAPDKSNIRYIIYVKKGTYKENIEVGKTKKNVMIIGDGMDSTIITGSLNVIDGATTFNSATLAAVGDGFIAQDIWIQNTAGPAKHQAVALRVGADQSVINRCRIDAYQDTLYAHSNRQFYRDSYITGTVDFIFGNAAVVFQNCKIVARKPMSNQANMVTAQGRIDPNQNTGTSIQKCDIIASSDLKPVKKSIKSYLGRPWKEYSRTVFMQSNIGDHIDPTGWAEWNGSFALKTLYYGEYANSGAGADVSKRVKWAGYHVIKNPAEAQKFTVSRLIQGEVWLKPTGVTYSEGL 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 472465 474985 - Conep01aG0009900.1 Cone1ag0094 430785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0094 600 ProSitePatterns Pectinesterase signature 1. 314 333 IPR018040 -
Cone1ag0094 600 Pfam Plant invertase/pectin methylesterase inhibitor 68 222 IPR006501 GO:0004857(InterPro)
Cone1ag0094 600 FunFam Pectinesterase 290 600 - -
Cone1ag0094 600 Gene3D - 294 600 IPR012334 -
Cone1ag0094 600 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 68 223 IPR035513 -
Cone1ag0094 600 Gene3D Invertase/pectin methylesterase inhibitor family protein 67 226 IPR035513 -
Cone1ag0094 600 Pfam Pectinesterase 301 586 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cone1ag0094 600 SMART PMEI_2 64 222 IPR006501 GO:0004857(InterPro)
Cone1ag0094 600 SUPERFAMILY Pectin lyase-like 302 599 IPR011050 -
Cone1ag0094 600 CDD PMEI-like_4 72 224 - -
Cone1ag0094 600 PANTHER PECTINESTERASE 38 591 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cone1ag0094 600 ProSitePatterns Pectinesterase signature 2. 433 442 IPR033131 -
Cone1ag0094 600 NCBIfam pectinesterase inhibitor domain 38 198 IPR006501 GO:0004857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0094 Cone-Chr1:472465 Cone7ag0832 Cone-Chr7:6238440 2.17E-135 dispersed
Cone1ag0094 Cone-Chr1:472465 Cone1ag0980 Cone-Chr1:54911997 1.11E-137 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0094 K01051 - cit:102630292 639.802