Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0165 ATGGCGAAATCAAACACTCAAATCCAATTATACCTTTTAGTTACTTTCCTATTTTTCCAATCCATCATAGCTATTGATTTTGTCTTCAATGGCTTCAACTCATCTGATCTCTTGCTTTTTGGCAACTCCACCAGCGTTGACGATCAATCTCACATTCTGACACTTACAAACAAAACAAGTTTCTCAACAGGAAGAGCTCTCTACCCTAAGAAGATCCCCACAAAGAAAACCAACACGTCATTTGTGTATCCCTTCTCAACTTCTTTCATCTTCGCCATGGCTCCTTATAAGAACACTCTTCCCGGCCATGGCTTAGTTTTCATCTTTACCCCTTTCACAGGTATCAACGGCACTAGCTCAGCTCAACATCTAGGCCTTTTCAACTTCTCAAACAATGGTAAATCCGATAACCATGTGCTTGGAATTGAGTTTGACATCTTTGCTAATCAAGAATTCAATGATATTAATGACAACCATGTTGGGATCGACTTGAATTCACTTGCATCGGAATTTTCGGAAGATGCCGGGTATTGGCTGAATGATGATGAGAAAGATTCTTTCAAGAAGTTGAAGTTGAATAGTGGTGAGACCTTTCAAGTTTGGATTGATTATTCAGATTCTTCGATCAACGTTACTATGGCTCCAGCCGGGACAAAACGGCCCCGGAAACCCTTAATGAGTGTTTCGGTTAATCTTTCAGAGATTTTCGTGGATGAAATGTATCTTGGGTTTACTAGTGCAACTGGTAAGTTAGTTCAAAGTCACAAAGTCTTGGCTTGGAGCTTTAGTAATTCGGACTTTACGTTAAGTGAGAGATTGATCACAACCAATTTGCCGTCTTTTGTCCTTCCAAAAGATCCTATTTATCGTTCAAACGGGTTTATATTAGGAATCTCAATTGGGGGAGTTTTTGTTTTTTCTTCTACTGCATTGCTTGGGATGTTTTTGATCAAGAAGCATAGGCAAAAGGCGAGGGAGAGGGCGGAAATGGATGATTGGGAAATGGAATATTGGCCCCACCGAATTACATACCAAGAAATTAAGGCAGCGACAAATGGATTCGGGGAAGAAAATGTCATTGGGATTGGAGGAAATGGTAAGGTCTATAAGGGTGTTTTACTGGGTAGTGTTAAGATTGCCGTGAAACGGATTTCGCAAGAAAACAACGGGGTTAGAGAATTCTTGGCTGAGATTTCAAGCATTGGAAGGTTAAAGCATAGAAGTTTAGTTGGATTAAGAGGTTGGTGTAAAAGGGAGAAAGGAAGTTTTATGTTGGTTTATGATTATATGGAAAATGGGAGTTTAGATAGGAAGGTGTTTGATTGTGACCTCAAAGAACTTTTGAGCTATCAGGATAGGGTAAGGATTTTGAAAGATGTGGCTTTTGGGGTCTTATATTTGCATGAAGGGTGGGAAACTAAAGTGCTACATAGAGATATCAAAGCCAGCAATGTCTTACTTGACAAAGAAATGAATGGAAAGCTTGGTGATTTTGGATTGGCCCGTCTACACGGTAACGGACAAGTATCTAGCACAACATGTGTAGTTGGAACAATTGGTTACTTAGCCCCTGAAACAATTCATAGCGGACGAATATCAACTAAAACCGATGTGTTTGGATTCGGAGTATTAATTCTGGAAGTAATGTGTGGGAGAAGACCTATTGAAGATGGCAAGCCACCATTAATTGATTGGGTTTGGCAAATGAAAATACAAGGGCAATTAACAAATGCAATTGATGAAAGGATTATGGCTAATAATGATGGAGGAATCGATGAAGAGGAAGTGGAGAGAGTGTTGAATTTGGGCCTATTGTGTTCTTATCATGACCCAAATGCAAGGCCCAGTATGAGACAAGTAGTGAAGTTTATGGAAGGGAGGAATAGTGGAGTTGAAGAGTGGGAGAACGAGGACAAAATTGATGTGAATTTGCTTCAAAGATTGAATAGTACTTCACAAAATCATCAAATGGGTCGTCGTTCTTCCTCACTGTCTCTCTCTTGGTCCAATTCTATAGTGACAACTGGTCGGTAA 2034 39.87 MAKSNTQIQLYLLVTFLFFQSIIAIDFVFNGFNSSDLLLFGNSTSVDDQSHILTLTNKTSFSTGRALYPKKIPTKKTNTSFVYPFSTSFIFAMAPYKNTLPGHGLVFIFTPFTGINGTSSAQHLGLFNFSNNGKSDNHVLGIEFDIFANQEFNDINDNHVGIDLNSLASEFSEDAGYWLNDDEKDSFKKLKLNSGETFQVWIDYSDSSINVTMAPAGTKRPRKPLMSVSVNLSEIFVDEMYLGFTSATGKLVQSHKVLAWSFSNSDFTLSERLITTNLPSFVLPKDPIYRSNGFILGISIGGVFVFSSTALLGMFLIKKHRQKARERAEMDDWEMEYWPHRITYQEIKAATNGFGEENVIGIGGNGKVYKGVLLGSVKIAVKRISQENNGVREFLAEISSIGRLKHRSLVGLRGWCKREKGSFMLVYDYMENGSLDRKVFDCDLKELLSYQDRVRILKDVAFGVLYLHEGWETKVLHRDIKASNVLLDKEMNGKLGDFGLARLHGNGQVSSTTCVVGTIGYLAPETIHSGRISTKTDVFGFGVLILEVMCGRRPIEDGKPPLIDWVWQMKIQGQLTNAIDERIMANNDGGIDEEEVERVLNLGLLCSYHDPNARPSMRQVVKFMEGRNSGVEEWENEDKIDVNLLQRLNSTSQNHQMGRRSSSLSLSWSNSIVTTGR 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 923247 925305 + Conep01aG0017300.1 Cone1ag0165 430856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0165 677 Pfam Legume lectin domain 25 266 IPR001220 GO:0030246(InterPro)
Cone1ag0165 677 Gene3D Phosphorylase Kinase; domain 1 315 429 - -
Cone1ag0165 677 FunFam L-type lectin-domain containing receptor kinase S.4 23 270 - -
Cone1ag0165 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone1ag0165 677 Gene3D - 23 265 - -
Cone1ag0165 677 Pfam Protein kinase domain 357 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0165 677 SUPERFAMILY Protein kinase-like (PK-like) 332 624 IPR011009 -
Cone1ag0165 677 FunFam L-type lectin-domain containing receptor kinase S.4 430 637 - -
Cone1ag0165 677 PANTHER - 32 628 IPR050528 GO:0005886(PANTHER)
Cone1ag0165 677 CDD lectin_legume_LecRK_Arcelin_ConA 25 265 IPR001220 GO:0030246(InterPro)
Cone1ag0165 677 CDD STKc_IRAK 360 626 - -
Cone1ag0165 677 ProSiteProfiles Protein kinase domain profile. 354 635 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0165 677 Gene3D Transferase(Phosphotransferase) domain 1 430 650 - -
Cone1ag0165 677 SMART serkin_6 354 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone1ag0165 677 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 316 429 - -
Cone1ag0165 677 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524(InterPro)
Cone1ag0165 677 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 267 IPR013320 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1420 Cone-Chr19:9274178 Cone1ag0165 Cone-Chr1:923247 3.38E-145 dispersed
Cone1ag0165 Cone-Chr1:923247 Cone8ag0925 Cone-Chr8:8917454 1.75E-101 dispersed
Cone1ag0165 Cone-Chr1:923247 Cone1ag0166 Cone-Chr1:926038 5.76E-267 tandem
Cone1ag0165 Cone-Chr1:923247 Cone9ag1025 Cone-Chr9:5436810 1.38E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82446 PF04564 U-box 2.30E-20 CL0229 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0165 - - - 0.0