Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag0247 | ATGCAGTATACTTTTGCATTGTTACAATGTGTTGGGTACGGAGATATCACTCCAAGTAGTACTTCTACAAAGCTATTTTCTATACTATTTGTATTAGTCGGGTTCGGGCTAATTGATATTTTACTCACTGGAATGGTTGGCTACATGCTTGATTTACAAGAAAGCTATTTGTTAAGAAATGTTACTAATAAGGATCGAAAAGAGTCTTCTTCATCATCATCGTCGTCTAAAAAAAGGTCATATATAATTGATGTGAAGAAAGGGAGAATGAGGATTAGGATGAAAGTGGGATTGGCTTTAGTGGTTGTGGTTATATGTATAGGGGTTGGTGCTTGCGTCATGCATTTTATGGAGCGGTTAGAATGGTTGGATTCAGTTTATTTGTCTGTTATGTCTGTTACAACAGTTGGTTACGGTGATCGGGCATTCACGTCTATGAGCGGTCGTATCTTCGCTTTGGTTTGGTTGCTTGTGTCTACGCTTGCTGTTGCTCGGGCGTTTCTTTATTTGGCCGAGGCGAGGGTGGATAAGCGGAATAGGAAGATGGCTAAGTGGATTCTTGGTCAAGATATGACCGTTTCCGAGTTTCTTGCTGCTGATATTGATAATAATGGGTTTGTGAGTAAATCAGAGTATGCCATATACAAGCTCAAGGAGATGGGGAAGATATCCGAGAAAGACATTTTACAGATTTGCAGTACATTTGATCGGTTGGATGCGGGAAACTGTGGAAAAATTACTCTTGCCAATCTCCTCGAGAATCATCACTAG | 771 | 40.21 | MQYTFALLQCVGYGDITPSSTSTKLFSILFVLVGFGLIDILLTGMVGYMLDLQESYLLRNVTNKDRKESSSSSSSSKKRSYIIDVKKGRMRIRMKVGLALVVVVICIGVGACVMHFMERLEWLDSVYLSVMSVTTVGYGDRAFTSMSGRIFALVWLLVSTLAVARAFLYLAEARVDKRNRKMAKWILGQDMTVSEFLAADIDNNGFVSKSEYAIYKLKEMGKISEKDILQICSTFDRLDAGNCGKITLANLLENHH | 256 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1641684 | 1643866 | + | Conep01aG0026100.1 | Cone1ag0247 | 430938 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag0247 | 256 | Pfam | Ion channel | 3 | 48 | IPR013099 | - | |
Cone1ag0247 | 256 | Pfam | Ion channel | 102 | 172 | IPR013099 | - | |
Cone1ag0247 | 256 | ProSitePatterns | EF-hand calcium-binding domain. | 200 | 212 | IPR018247 | - | |
Cone1ag0247 | 256 | SUPERFAMILY | Voltage-gated potassium channels | 86 | 191 | - | - | |
Cone1ag0247 | 256 | Gene3D | - | 169 | 256 | - | - | |
Cone1ag0247 | 256 | SUPERFAMILY | Voltage-gated potassium channels | 3 | 59 | - | - | |
Cone1ag0247 | 256 | PRINTS | Two pore domain K+ channel signature | 134 | 143 | IPR003280 | GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro) | |
Cone1ag0247 | 256 | PRINTS | Two pore domain K+ channel signature | 6 | 34 | IPR003280 | GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro) | |
Cone1ag0247 | 256 | Gene3D | - | 1 | 168 | - | - | |
Cone1ag0247 | 256 | PANTHER | POTASSIUM CHANNEL, SUBFAMILY K | 3 | 203 | IPR003280 | GO:0005267(InterPro)|GO:0005887(PANTHER)|GO:0009705(PANTHER)|GO:0015271(PANTHER)|GO:0016020(InterPro)|GO:0022841(PANTHER)|GO:0030322(PANTHER)|GO:0071805(InterPro)|GO:0071805(PANTHER) | |
Cone1ag0247 | 256 | FunFam | Two-pore potassium channel 3 | 79 | 193 | - | - | |
Cone1ag0247 | 256 | SUPERFAMILY | EF-hand | 192 | 251 | IPR011992 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag0247 | Cone-Chr1:1641684 | Cone3ag1489 | Cone-Chr3:33540578 | 1.34E-81 | dispersed | |
Cone1ag0247 | Cone-Chr1:1641684 | Cone5ag1609 | Cone-Chr5:11296569 | 1.80E-135 | wgd | |
Cone1ag0247 | Cone-Chr1:1641684 | Cone6ag0909 | Cone-Chr6:4668373 | 3.53E-49 | wgd | |
Cone1ag0247 | Cone-Chr1:1641684 | Cone9ag0915 | Cone-Chr9:4502453 | 6.02E-115 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag0247 | K05389 | - | vvi:100262340 | 373.244 |