Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone1ag0247 ATGCAGTATACTTTTGCATTGTTACAATGTGTTGGGTACGGAGATATCACTCCAAGTAGTACTTCTACAAAGCTATTTTCTATACTATTTGTATTAGTCGGGTTCGGGCTAATTGATATTTTACTCACTGGAATGGTTGGCTACATGCTTGATTTACAAGAAAGCTATTTGTTAAGAAATGTTACTAATAAGGATCGAAAAGAGTCTTCTTCATCATCATCGTCGTCTAAAAAAAGGTCATATATAATTGATGTGAAGAAAGGGAGAATGAGGATTAGGATGAAAGTGGGATTGGCTTTAGTGGTTGTGGTTATATGTATAGGGGTTGGTGCTTGCGTCATGCATTTTATGGAGCGGTTAGAATGGTTGGATTCAGTTTATTTGTCTGTTATGTCTGTTACAACAGTTGGTTACGGTGATCGGGCATTCACGTCTATGAGCGGTCGTATCTTCGCTTTGGTTTGGTTGCTTGTGTCTACGCTTGCTGTTGCTCGGGCGTTTCTTTATTTGGCCGAGGCGAGGGTGGATAAGCGGAATAGGAAGATGGCTAAGTGGATTCTTGGTCAAGATATGACCGTTTCCGAGTTTCTTGCTGCTGATATTGATAATAATGGGTTTGTGAGTAAATCAGAGTATGCCATATACAAGCTCAAGGAGATGGGGAAGATATCCGAGAAAGACATTTTACAGATTTGCAGTACATTTGATCGGTTGGATGCGGGAAACTGTGGAAAAATTACTCTTGCCAATCTCCTCGAGAATCATCACTAG 771 40.21 MQYTFALLQCVGYGDITPSSTSTKLFSILFVLVGFGLIDILLTGMVGYMLDLQESYLLRNVTNKDRKESSSSSSSSKKRSYIIDVKKGRMRIRMKVGLALVVVVICIGVGACVMHFMERLEWLDSVYLSVMSVTTVGYGDRAFTSMSGRIFALVWLLVSTLAVARAFLYLAEARVDKRNRKMAKWILGQDMTVSEFLAADIDNNGFVSKSEYAIYKLKEMGKISEKDILQICSTFDRLDAGNCGKITLANLLENHH 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1641684 1643866 + Conep01aG0026100.1 Cone1ag0247 430938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone1ag0247 256 Pfam Ion channel 3 48 IPR013099 -
Cone1ag0247 256 Pfam Ion channel 102 172 IPR013099 -
Cone1ag0247 256 ProSitePatterns EF-hand calcium-binding domain. 200 212 IPR018247 -
Cone1ag0247 256 SUPERFAMILY Voltage-gated potassium channels 86 191 - -
Cone1ag0247 256 Gene3D - 169 256 - -
Cone1ag0247 256 SUPERFAMILY Voltage-gated potassium channels 3 59 - -
Cone1ag0247 256 PRINTS Two pore domain K+ channel signature 134 143 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cone1ag0247 256 PRINTS Two pore domain K+ channel signature 6 34 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cone1ag0247 256 Gene3D - 1 168 - -
Cone1ag0247 256 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 3 203 IPR003280 GO:0005267(InterPro)|GO:0005887(PANTHER)|GO:0009705(PANTHER)|GO:0015271(PANTHER)|GO:0016020(InterPro)|GO:0022841(PANTHER)|GO:0030322(PANTHER)|GO:0071805(InterPro)|GO:0071805(PANTHER)
Cone1ag0247 256 FunFam Two-pore potassium channel 3 79 193 - -
Cone1ag0247 256 SUPERFAMILY EF-hand 192 251 IPR011992 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0247 Cone-Chr1:1641684 Cone3ag1489 Cone-Chr3:33540578 1.34E-81 dispersed
Cone1ag0247 Cone-Chr1:1641684 Cone5ag1609 Cone-Chr5:11296569 1.80E-135 wgd
Cone1ag0247 Cone-Chr1:1641684 Cone6ag0909 Cone-Chr6:4668373 3.53E-49 wgd
Cone1ag0247 Cone-Chr1:1641684 Cone9ag0915 Cone-Chr9:4502453 6.02E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone1ag0247 K05389 - vvi:100262340 373.244