Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag0248 | ATGTCTGATAAGCATGATGAGAGAGGCTCTAACTATTACCACAACCTAAGGATCCAGATGCAGCTGCTAGATGATGATCATAATCAAAAGCCTTATGGAATTTCTGGGTCATCTAATTACTACAATCTTCAAGCTGGGTTTGATCCAAACCGTTCATTCACTGGGTATAGTATCAATAATAAGATTAACATTATTAATAATTGCTTTAATAGGGATGAAGCTGCTGCTGCTGCTGGTGCACCCATGGAATTTTTCTCTTCCTACTACAAATCATCACCATCAATACTATCAAGAGTACCAAGCTTTGCTGTTAATGGCTTGTCACCTTCTTCATCTGAAGTGATTTCCTCCATAGAATTAAGTCGTGATCAAAAGGTTGAGGATCATGACCAGGCTGATGTGAATTATGATGGATATAATTCATTGGCTAGGAATTCATCTGCAGTTTCTTCTAATTCTTCCTCTGGGGCTGGCGTTAATGCAGAAGAGAACTCTAGCAAGAGTACTACTACTAAGAAGAAGATCAATAGGCAGTCTTCAAAATTGGAGGATGAGGAATTAGAAGGAGAAGGAGAAGAAGAAGAAGAAAAAAAAGAAGAGGAAAGCTCTGAGAAAGTAGAACCCATGCAAGTGTTCAAAGGGAAGAAGAAAGGAGAGAAGAAGGAGAAAGAGCCAAGAGTTGCTTTCATGACCAAGAGTGAGGTTGATCATCTAGAAGATGGGTATAGATGGAGAAAATATGGACAGAAGGCTGTCAAGAATAGCCCTTATCCAAGAAGTTACTACAGGTGCACAACACAAAAATGCAAGGTGAAGAAACGAGTGGAGAGATCATATGAAGATCCATCTACGGTGATAACTACGTACGAACGTCAGCATAACCATCCACTACCATCAACGCTTAGAGGACATAGTAATCACAACATGGCGGCCGCGGCAGCTTCTTCTTCTATTTTCCAACCTTCAATGTTGCTGCCGCCACAAATGGCGGCTCCGCCTTATAGTTTTTCTCAGTTGTTGAGTACTACTCAAATGCCTCATCATCAGTATCTTAACCCTGGCTTCCGTATCGGCGGGTCCTCGGCTGCCGCCTCCGACGGTTATTCACAAATCCAGAACCATTCTCATCATCAATATAATGATATGTCTCACGAATATGGACTATTGCAAGACATTTTAAACCCCATGTTCCTTCAACAACACCCATGA | 1209 | 41.36 | MSDKHDERGSNYYHNLRIQMQLLDDDHNQKPYGISGSSNYYNLQAGFDPNRSFTGYSINNKINIINNCFNRDEAAAAAGAPMEFFSSYYKSSPSILSRVPSFAVNGLSPSSSEVISSIELSRDQKVEDHDQADVNYDGYNSLARNSSAVSSNSSSGAGVNAEENSSKSTTTKKKINRQSSKLEDEELEGEGEEEEEKKEEESSEKVEPMQVFKGKKKGEKKEKEPRVAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCKVKKRVERSYEDPSTVITTYERQHNHPLPSTLRGHSNHNMAAAAASSSIFQPSMLLPPQMAAPPYSFSQLLSTTQMPHHQYLNPGFRIGGSSAAASDGYSQIQNHSHHQYNDMSHEYGLLQDILNPMFLQQHP | 402 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1653400 | 1655520 | + | Conep01aG0026200.1 | Cone1ag0248 | 430939 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag0248 | 402 | MobiDBLite | consensus disorder prediction | 201 | 224 | - | - | |
Cone1ag0248 | 402 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 131 | 328 | IPR044810 | GO:0003700(InterPro) | |
Cone1ag0248 | 402 | Coils | Coil | 175 | 204 | - | - | |
Cone1ag0248 | 402 | SMART | WRKY_cls | 238 | 297 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone1ag0248 | 402 | Pfam | WRKY DNA -binding domain | 239 | 296 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone1ag0248 | 402 | MobiDBLite | consensus disorder prediction | 145 | 175 | - | - | |
Cone1ag0248 | 402 | ProSiteProfiles | WRKY domain profile. | 233 | 298 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone1ag0248 | 402 | FunFam | WRKY transcription factor 57 | 224 | 298 | - | - | |
Cone1ag0248 | 402 | Gene3D | WRKY domain | 222 | 299 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone1ag0248 | 402 | MobiDBLite | consensus disorder prediction | 145 | 224 | - | - | |
Cone1ag0248 | 402 | MobiDBLite | consensus disorder prediction | 185 | 200 | - | - | |
Cone1ag0248 | 402 | SUPERFAMILY | WRKY DNA-binding domain | 230 | 298 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag1424 | Cone-Chr10:11017299 | Cone1ag0248 | Cone-Chr1:1653400 | 1.82E-44 | dispersed | |
Cone1ag0248 | Cone-Chr1:1653400 | Cone3ag1488 | Cone-Chr3:33533095 | 1.41E-42 | dispersed | |
Cone1ag0248 | Cone-Chr1:1653400 | Cone15ag0722 | Cone-Chr15:4027841 | 9.60E-36 | wgd | |
Cone1ag0248 | Cone-Chr1:1653400 | Cone5ag1608 | Cone-Chr5:11290360 | 4.77E-188 | wgd | |
Cone1ag0248 | Cone-Chr1:1653400 | Cone6ag0908 | Cone-Chr6:4663736 | 8.97E-44 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45410 | PF00071 | Ras | 2.70E-61 | CL0023 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag0248 | - | - | - | 0.0 |