Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone1ag0276 | ATGGCTAGCAAGACCAAGATTTACATTGTTATGGAATTTGTGACTGGTGGGGAATTGTTTGACAAAATTTCAAGTAAAGGGAGATTGAAAGAAGATGATGCAAGGAAGTATTTCCAGCAGCTTATAAATGCTGTTGATTATTGTCATAGTAGAGGAGTTTTTCATAGAGATTTAAAGCCAGAGAATCTGCTGCTGGATGCTAGTAATGTTCTAAAAGTTTCAGATTTTGGATTGAGCGCACTACCTCAACAAGTTAGAGAGGATGGATTACTCCACACAACATGTGGAACACCAAATTATATTGCTCCAGAGGTGATAAAAAACAAAGGCTATGATGGAGCAAAGGCCGATTTGTGGTCTTGTGGCGTGATTCTCTTTGTCCTAATGGCTGGTTTTTTACCTTTCGAAGAGTCCAACCTCATGGCATTATATAAGAAGATATTCAAGGCTGACTTTACAAGTCCACCATGGTTCTCTACTGGTGCAAAGAAACTAGTCAAGAGAATCCTCGACCCTAATCCCTCAACTAGAATCTCTATTGCTGAGGTCATCAACAATGAATGGTTTAGAAAAGGATATAAGCAACCCACTTTTGAACAAGGTGCTTTTAGCCTTGATGACGTTGATTCTATCTTCAATGAATCAGGGGAGTCTAATAACCTTGTGGTGGAGAGGAGAGATGAAGGGCCCACAGTGCCTAGCACTATGAATGCTTTTGAGCTCATCTCTACATCCCAGGGCCTCAACCTCAGTATTCTTTTCGAGAAGCAAATGGGCCTTGTTAAACGTGAAACAAGATTCACATCTAATCGTCCTGTTAGTGAGATCATTTCCAAAATTGAAGAAGTTGCTGGGCCATTGGGTTTTGATGTGAAGAAGAATAACTTCAAGATGAAGCTTCAGGGGGAAAAAAGTGGTCGCAAGGGTCATTTATCTGTTGCAACAGAGATTTTGGAAGTGGCCCCTTTACTCCACATGGTGGAGTTCCGTAAAGCCAAAGGAGATACCTTAGAATTTCACAAGTTCTATAACAACCTCTCAACTGGGTTGAAAGATATCGTATGGAAGTCTGAAGATGGAGACGGATTTGGAAATAGTGGAATTGATGACGCTGACGTGACAAGGATTTAG | 1131 | 40.76 | MASKTKIYIVMEFVTGGELFDKISSKGRLKEDDARKYFQQLINAVDYCHSRGVFHRDLKPENLLLDASNVLKVSDFGLSALPQQVREDGLLHTTCGTPNYIAPEVIKNKGYDGAKADLWSCGVILFVLMAGFLPFEESNLMALYKKIFKADFTSPPWFSTGAKKLVKRILDPNPSTRISIAEVINNEWFRKGYKQPTFEQGAFSLDDVDSIFNESGESNNLVVERRDEGPTVPSTMNAFELISTSQGLNLSILFEKQMGLVKRETRFTSNRPVSEIISKIEEVAGPLGFDVKKNNFKMKLQGEKSGRKGHLSVATEILEVAPLLHMVEFRKAKGDTLEFHKFYNNLSTGLKDIVWKSEDGDGFGNSGIDDADVTRI | 376 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1872727 | 1880840 | + | Conep01aG0029400.1 | Cone1ag0276 | 430967 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone1ag0276 | 376 | FunFam | Non-specific serine/threonine protein kinase | 14 | 196 | - | - | |
Cone1ag0276 | 376 | CDD | CIPK_C | 237 | 352 | - | - | |
Cone1ag0276 | 376 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 53 | 65 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone1ag0276 | 376 | ProSiteProfiles | NAF domain profile. | 231 | 255 | IPR018451 | GO:0007165(InterPro) | |
Cone1ag0276 | 376 | SMART | serkin_6 | 1 | 189 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag0276 | 376 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 199 | IPR011009 | - | |
Cone1ag0276 | 376 | Pfam | NAF domain | 233 | 293 | IPR004041 | GO:0007165(InterPro) | |
Cone1ag0276 | 376 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 1 | 340 | - | GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
Cone1ag0276 | 376 | Gene3D | Transferase(Phosphotransferase) domain 1 | 14 | 196 | - | - | |
Cone1ag0276 | 376 | FunFam | Non-specific serine/threonine protein kinase | 230 | 356 | - | - | |
Cone1ag0276 | 376 | ProSiteProfiles | Protein kinase domain profile. | 1 | 189 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag0276 | 376 | Pfam | Protein kinase domain | 2 | 189 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone1ag0276 | 376 | Gene3D | Kinase associated domain 1, KA1 | 231 | 356 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag0276 | Cone-Chr1:1872727 | Cone6ag1118 | Cone-Chr6:7140717 | 2.52E-224 | dispersed | |
Cone1ag0276 | Cone-Chr1:1872727 | Cone15ag0687 | Cone-Chr15:3700415 | 3.61E-110 | wgd | |
Cone1ag0276 | Cone-Chr1:1872727 | Cone5ag1568 | Cone-Chr5:10936351 | 1.70E-249 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82456 | PF00112 | Peptidase_C1 | 1.10E-48 | CL0125 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone1ag0276 | - | - | - | 0.0 |